RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 USP32Q8NFA0 1604 aa8.62□□□□□ -1.03
SPEN-204ENST00000471538 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
SPEN-204ENST00000471538 PPP2R1AP30153 589 aa8.62□□□□□ -1.03
SPEN-204ENST00000471538 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
SPEN-204ENST00000471538 CPS1P31327 1500 aa8.61□□□□□ -1.03
SPEN-204ENST00000471538 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
SPEN-204ENST00000471538 PPP4R2Q9NY27 417 aa8.61□□□□□ -1.03
SPEN-204ENST00000471538 RGS17Q9UGC6 210 aaPredicted RBP8.61□□□□□ -1.03
SPEN-204ENST00000471538 KNSTRNQ9Y448 316 aa8.61□□□□□ -1.03
SPEN-204ENST00000471538 STRCP1A6NGW2 1772 aa8.61□□□□□ -1.03
SPEN-204ENST00000471538 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
SPEN-204ENST00000471538 ST18O60284 1047 aa8.6□□□□□ -1.03
SPEN-204ENST00000471538 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
SPEN-204ENST00000471538 IDI1Q13907 227 aa8.6□□□□□ -1.03
SPEN-204ENST00000471538 SLC52A1Q9NWF4 448 aa8.6□□□□□ -1.03
SPEN-204ENST00000471538 PDE3BQ13370 1112 aa8.59□□□□□ -1.03
SPEN-204ENST00000471538 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
SPEN-204ENST00000471538 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
SPEN-204ENST00000471538 TOM1O60784 492 aa8.58□□□□□ -1.04
SPEN-204ENST00000471538 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
SPEN-204ENST00000471538 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
SPEN-204ENST00000471538 IER5LQ5T953 404 aa8.57□□□□□ -1.04
SPEN-204ENST00000471538 TRAK1Q9UPV9 953 aa8.57□□□□□ -1.04
SPEN-204ENST00000471538 SETD1AO15047 1707 aaKnown RBP8.56□□□□□ -1.04
SPEN-204ENST00000471538 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 SEC24BO95487 1268 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 TMEM132EQ6IEE7 984 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 RASEFQ8IZ41 740 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 SHPRHQ149N8 1683 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 ZNF521Q96K83 1311 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 NSD3Q9BZ95 1437 aa8.56□□□□□ -1.04
SPEN-204ENST00000471538 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
SPEN-204ENST00000471538 LRRC7Q96NW7 1537 aa8.55□□□□□ -1.04
SPEN-204ENST00000471538 MED14O60244 1454 aa8.55□□□□□ -1.04
SPEN-204ENST00000471538 TNRQ92752 1358 aa8.55□□□□□ -1.04
SPEN-204ENST00000471538 PLEKHH1Q9ULM0 1364 aa8.55□□□□□ -1.04
SPEN-204ENST00000471538 MMRN1Q13201 1228 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
SPEN-204ENST00000471538 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
SPEN-204ENST00000471538 SPNS2Q8IVW8 549 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 DLC1Q96QB1 1528 aa8.54□□□□□ -1.04
SPEN-204ENST00000471538 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
SPEN-204ENST00000471538 XIRP1Q702N8 1843 aaKnown RBP8.53□□□□□ -1.04
SPEN-204ENST00000471538 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
SPEN-204ENST00000471538 B4GALNT3Q6L9W6 998 aa8.53□□□□□ -1.04
SPEN-204ENST00000471538 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
SPEN-204ENST00000471538 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
SPEN-204ENST00000471538 YTHDC2Q9H6S0 1430 aaKnown RBP8.53□□□□□ -1.04
SPEN-204ENST00000471538 EVC2Q86UK5 1308 aa8.52□□□□□ -1.04
SPEN-204ENST00000471538 NRXN3Q9Y4C0 1643 aa8.52□□□□□ -1.05
SPEN-204ENST00000471538 NINLQ9Y2I6 1382 aa8.52□□□□□ -1.05
SPEN-204ENST00000471538 WDR43Q15061 677 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPEN-204ENST00000471538 POTEAQ6S8J7 498 aa8.52□□□□□ -1.05
SPEN-204ENST00000471538 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
SPEN-204ENST00000471538 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.05
SPEN-204ENST00000471538 RBM19Q9Y4C8 960 aaKnown RBP8.52□□□□□ -1.05
SPEN-204ENST00000471538 NSD2O96028 1365 aa8.51□□□□□ -1.05
SPEN-204ENST00000471538 ANKRD26Q9UPS8 1709 aa8.51□□□□□ -1.05
SPEN-204ENST00000471538 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
SPEN-204ENST00000471538 SALL2Q9Y467 1007 aaPredicted RBP8.51□□□□□ -1.05
SPEN-204ENST00000471538 NLRP1Q9C000 1473 aa8.51□□□□□ -1.05
SPEN-204ENST00000471538 CD163L1Q9NR16 1453 aa8.51□□□□□ -1.05
SPEN-204ENST00000471538 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
SPEN-204ENST00000471538 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
SPEN-204ENST00000471538 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
SPEN-204ENST00000471538 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
SPEN-204ENST00000471538 DUSP27Q5VZP5 1158 aa8.49□□□□□ -1.05
SPEN-204ENST00000471538 SRCAPQ6ZRS2 3230 aa8.49□□□□□ -1.05
SPEN-204ENST00000471538 PLCD3Q8N3E9 789 aa8.48□□□□□ -1.05
SPEN-204ENST00000471538 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
SPEN-204ENST00000471538 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
SPEN-204ENST00000471538 SLFN5Q08AF3 891 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 MORC1Q86VD1 984 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
SPEN-204ENST00000471538 NGEFQ8N5V2 710 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 CABP2Q9NPB3 220 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 CGNL1Q0VF96 1302 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 UBR1Q8IWV7 1749 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 COL3A1P02461 1466 aaPredicted RBP8.47□□□□□ -1.05
SPEN-204ENST00000471538 ADGRB2O60241 1585 aa8.47□□□□□ -1.05
SPEN-204ENST00000471538 GOLGA2Q08379 1002 aa8.46□□□□□ -1.05
SPEN-204ENST00000471538 EXOC6Q8TAG9 804 aa8.46□□□□□ -1.05
SPEN-204ENST00000471538 PRAM1Q96QH2 718 aa8.46□□□□□ -1.05
SPEN-204ENST00000471538 KIF20BQ96Q89 1820 aa8.46□□□□□ -1.06
SPEN-204ENST00000471538 APAF1O14727 1248 aa8.46□□□□□ -1.06
SPEN-204ENST00000471538 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.06
SPEN-204ENST00000471538 CCDC136Q96JN2 1154 aa8.46□□□□□ -1.06
SPEN-204ENST00000471538 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.06
SPEN-204ENST00000471538 STK26Q9P289 416 aa8.46□□□□□ -1.06
SPEN-204ENST00000471538 TECPR2O15040 1411 aa8.45□□□□□ -1.06
SPEN-204ENST00000471538 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
SPEN-204ENST00000471538 PCDHB13Q9Y5F0 798 aa8.45□□□□□ -1.06
SPEN-204ENST00000471538 NKTRP30414 1462 aaKnown RBP8.45□□□□□ -1.06
SPEN-204ENST00000471538 ATP7BP35670 1465 aa8.45□□□□□ -1.06
SPEN-204ENST00000471538 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
SPEN-204ENST00000471538 MINK1Q8N4C8 1332 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms