RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 RBM33Q96EV2 1170 aaKnown RBP4.32□□□□□ -1.72
CCNL1-214ENST00000471247 GJD4Q96KN9 370 aaPredicted RBP4.32□□□□□ -1.72
CCNL1-214ENST00000471247 PRR14Q9BWN1 585 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 REREQ9P2R6 1566 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 SYNJ2O15056 1496 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 NUP153P49790 1475 aaKnown RBP4.32□□□□□ -1.72
CCNL1-214ENST00000471247 MBD5Q9P267 1494 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 RFC5P40937 340 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 MSS51Q4VC12 460 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 RSPH4AQ5TD94 716 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 THAP11Q96EK4 314 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 ABCC2Q92887 1545 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 GAPVD1Q14C86 1478 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 ZNF518AQ6AHZ1 1483 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 IQGAP3Q86VI3 1631 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 SAMD9LQ8IVG5 1584 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 TRAK2O60296 914 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 SLC10A3P09131 477 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 PTPN23Q9H3S7 1636 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 GLI2P10070 1586 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 KDM5CP41229 1560 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 LRRC9Q6ZRR7 1453 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 EIF5BO60841 1220 aaKnown RBP4.31□□□□□ -1.72
CCNL1-214ENST00000471247 MYO3AQ8NEV4 1616 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 FHAD1B1AJZ9 1412 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 MCCD1P59942 119 aaPredicted RBP4.31□□□□□ -1.72
CCNL1-214ENST00000471247 PNMA3Q9UL41 463 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 TTC37Q6PGP7 1564 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 KIAA1210Q9ULL0 1709 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 EHBP1L1Q8N3D4 1523 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 KIAA0586Q9BVV6 1533 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 TMEM131LA2VDJ0 1609 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 LIMD1Q9UGP4 676 aa4.31□□□□□ -1.72
CCNL1-214ENST00000471247 PDS5BQ9NTI5 1447 aa4.3□□□□□ -1.72
CCNL1-214ENST00000471247 LSM11P83369 360 aaKnown RBP eCLIP4.3□□□□□ -1.722e-6■■■□□ 17.4
CCNL1-214ENST00000471247 HS3ST6Q96QI5 342 aa4.3□□□□□ -1.72
CCNL1-214ENST00000471247 CHIC2Q9UKJ5 165 aa4.3□□□□□ -1.72
CCNL1-214ENST00000471247 MYT1LQ9UL68 1186 aa4.3□□□□□ -1.72
CCNL1-214ENST00000471247 USP54Q70EL1 1684 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 SOWAHBA6NEL2 793 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 MORN1Q5T089 497 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 KIF27Q86VH2 1401 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 ADGRD1Q6QNK2 874 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 KIDINS220Q9ULH0 1771 aa4.29□□□□□ -1.72
CCNL1-214ENST00000471247 APBB1O00213 710 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 PTPRGP23470 1445 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 MYOM1P52179 1685 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 SPHKAPQ2M3C7 1700 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 KDM4AO75164 1064 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 MMP16P51512 607 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 CCDC125Q86Z20 511 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 ERBB3P21860 1342 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 IQGAP1P46940 1657 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 F12P00748 615 aaPredicted RBP4.28□□□□□ -1.72
CCNL1-214ENST00000471247 SRPK2P78362 688 aaKnown RBP4.28□□□□□ -1.72
CCNL1-214ENST00000471247 TTLL12Q14166 644 aaPredicted RBP4.28□□□□□ -1.72
CCNL1-214ENST00000471247 FAM9AQ8IZU1 332 aaPredicted RBP4.28□□□□□ -1.72
CCNL1-214ENST00000471247 KCNK17Q96T54 332 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 ZBTB3Q9H5J0 574 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 GPSM3Q9Y4H4 160 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 SHANK2Q9UPX8 1470 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 ARHGEF12Q9NZN5 1544 aa4.28□□□□□ -1.72
CCNL1-214ENST00000471247 C14orf37Q86TY3 774 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 PROCA1Q8NCQ7 364 aaPredicted RBP4.27□□□□□ -1.73
CCNL1-214ENST00000471247 GPKOWQ92917 476 aaPredicted RBP eCLIP4.27□□□□□ -1.735e-62■■■□□ 17.2
CCNL1-214ENST00000471247 PCDHGC3Q9UN70 934 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 COG6Q9Y2V7 657 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 RANGAP1P46060 587 aaPredicted RBP4.27□□□□□ -1.73
CCNL1-214ENST00000471247 PROX2Q3B8N5 592 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 Q3C1V9 767 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 VARS2Q5ST30 1063 aaKnown RBP4.27□□□□□ -1.73
CCNL1-214ENST00000471247 BRICD5Q6PL45 260 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 RIMS1Q86UR5 1692 aaKnown RBP4.27□□□□□ -1.73
CCNL1-214ENST00000471247 SWT1Q5T5J6 900 aaKnown RBP4.27□□□□□ -1.73
CCNL1-214ENST00000471247 LYPD8Q6UX82 237 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 PTPRKQ15262 1439 aa4.27□□□□□ -1.73
CCNL1-214ENST00000471247 MARF1Q9Y4F3 1742 aaKnown RBP4.26□□□□□ -1.73
CCNL1-214ENST00000471247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.26□□□□□ -1.73
CCNL1-214ENST00000471247 SOX11P35716 441 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 MTMR14Q8NCE2 650 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 KCNH8Q96L42 1107 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 NBPF3Q9H094 633 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 ATP6V1AP38606 617 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 GRIPAP1Q4V328 841 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 CAMSAP2Q08AD1 1489 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 WDR7Q9Y4E6 1490 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 PSEN2P49810 448 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 MPNDQ8N594 471 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 NFATC2IPQ8NCF5 419 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 EPRSP07814 1512 aaKnown RBP4.26□□□□□ -1.73
CCNL1-214ENST00000471247 ZMYM4Q5VZL5 1548 aa4.26□□□□□ -1.73
CCNL1-214ENST00000471247 PROSER2Q86WR7 435 aaPredicted RBP4.25□□□□□ -1.73
CCNL1-214ENST00000471247 TRIM34Q9BYJ4 488 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 PLSCR2Q9NRY7 297 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 MOXD2PA6NHM9 499 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 CCDC18Q5T9S5 1454 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 TRPM1Q7Z4N2 1603 aa4.25□□□□□ -1.73
CCNL1-214ENST00000471247 MROH2AA6NES4 1674 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms