RNA–Protein interactions for RNA: ENST00000470799.5

COL16A1-209, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-209ENST00000470799 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
COL16A1-209ENST00000470799 FAM83GA6ND36 823 aa22.7■■□□□ 1.22
COL16A1-209ENST00000470799 CARD11Q9BXL7 1154 aa22.7■■□□□ 1.22
COL16A1-209ENST00000470799 ITSN1Q15811 1721 aa22.68■■□□□ 1.22
COL16A1-209ENST00000470799 PPIP5K1Q6PFW1 1433 aa22.68■■□□□ 1.22
COL16A1-209ENST00000470799 CABP1Q9NZU7 370 aa22.68■■□□□ 1.22
COL16A1-209ENST00000470799 MARF1Q9Y4F3 1742 aaKnown RBP22.68■■□□□ 1.22
COL16A1-209ENST00000470799 TRPM1Q7Z4N2 1603 aa22.68■■□□□ 1.22
COL16A1-209ENST00000470799 SLIT2O94813 1529 aa22.67■■□□□ 1.22
COL16A1-209ENST00000470799 POLR3AO14802 1390 aaPredicted RBP22.67■■□□□ 1.22
COL16A1-209ENST00000470799 ABTB2Q8N961 1025 aa22.67■■□□□ 1.22
COL16A1-209ENST00000470799 TRPM3Q9HCF6 1732 aaPredicted RBP22.66■■□□□ 1.22
COL16A1-209ENST00000470799 PRDM11Q9NQV5 511 aa22.66■■□□□ 1.22
COL16A1-209ENST00000470799 VPS72Q15906 364 aa22.65■■□□□ 1.22
COL16A1-209ENST00000470799 BTG4Q9NY30 223 aa22.65■■□□□ 1.22
COL16A1-209ENST00000470799 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
COL16A1-209ENST00000470799 ATAD2Q6PL18 1390 aa22.63■■□□□ 1.21
COL16A1-209ENST00000470799 A0A0G2JS52 829 aa22.63■■□□□ 1.21
COL16A1-209ENST00000470799 MYT1Q01538 1121 aa22.63■■□□□ 1.21
COL16A1-209ENST00000470799 RALGAPBQ86X10 1494 aa22.62■■□□□ 1.21
COL16A1-209ENST00000470799 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
COL16A1-209ENST00000470799 TIMELESSQ9UNS1 1208 aa22.62■■□□□ 1.21
COL16A1-209ENST00000470799 ALS2Q96Q42 1657 aa22.62■■□□□ 1.21
COL16A1-209ENST00000470799 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
COL16A1-209ENST00000470799 TOPAZ1Q8N9V7 1692 aa22.59■■□□□ 1.21
COL16A1-209ENST00000470799 CHRNA2Q15822 529 aa22.59■■□□□ 1.21
COL16A1-209ENST00000470799 ABCA3Q99758 1704 aa22.58■■□□□ 1.21
COL16A1-209ENST00000470799 SEPT12Q8IYM1 358 aa22.58■■□□□ 1.21
COL16A1-209ENST00000470799 KIAA0232Q92628 1395 aa22.58■■□□□ 1.21
COL16A1-209ENST00000470799 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
COL16A1-209ENST00000470799 STRN4Q9NRL3 753 aa22.56■■□□□ 1.2
COL16A1-209ENST00000470799 PLCH1Q4KWH8 1693 aa22.55■■□□□ 1.2
COL16A1-209ENST00000470799 ZBTB7CA1YPR0 619 aa22.55■■□□□ 1.2
COL16A1-209ENST00000470799 EVA1CP58658 441 aa22.55■■□□□ 1.2
COL16A1-209ENST00000470799 NLRP6P59044 892 aa22.55■■□□□ 1.2
COL16A1-209ENST00000470799 BRD4O60885 1362 aaPredicted RBP22.54■■□□□ 1.2
COL16A1-209ENST00000470799 FAM98CQ17RN3 349 aaKnown RBP22.54■■□□□ 1.2
COL16A1-209ENST00000470799 ZNF692Q9BU19 519 aaPredicted RBP22.54■■□□□ 1.2
COL16A1-209ENST00000470799 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
COL16A1-209ENST00000470799 USP6P35125 1406 aa22.53■■□□□ 1.2
COL16A1-209ENST00000470799 GLI3P10071 1580 aa22.53■■□□□ 1.2
COL16A1-209ENST00000470799 NWD2Q9ULI1 1742 aa22.53■■□□□ 1.2
COL16A1-209ENST00000470799 GCP02774 474 aa22.52■■□□□ 1.2
COL16A1-209ENST00000470799 COL14A1Q05707 1796 aaKnown RBP22.52■■□□□ 1.2
COL16A1-209ENST00000470799 KRT27Q7Z3Y8 459 aa22.5■■□□□ 1.19
COL16A1-209ENST00000470799 USP19O94966 1318 aa22.5■■□□□ 1.19
COL16A1-209ENST00000470799 ONECUT3O60422 494 aaPredicted RBP22.49■■□□□ 1.19
COL16A1-209ENST00000470799 SPATA31A5Q5VU36 1347 aa22.49■■□□□ 1.19
COL16A1-209ENST00000470799 SPATA31A7Q8IWB4 1347 aa22.49■■□□□ 1.19
COL16A1-209ENST00000470799 SBNO2Q9Y2G9 1366 aa22.49■■□□□ 1.19
COL16A1-209ENST00000470799 CCDC125Q86Z20 511 aa22.48■■□□□ 1.19
COL16A1-209ENST00000470799 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
COL16A1-209ENST00000470799 KTN1Q86UP2 1357 aaKnown RBP22.48■■□□□ 1.19
COL16A1-209ENST00000470799 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
COL16A1-209ENST00000470799 TTC21BQ7Z4L5 1316 aa22.47■■□□□ 1.19
COL16A1-209ENST00000470799 SOX12O15370 315 aa22.46■■□□□ 1.19
COL16A1-209ENST00000470799 SF3B2Q13435 895 aaKnown RBP22.46■■□□□ 1.19
COL16A1-209ENST00000470799 PHRF1Q9P1Y6 1649 aaKnown RBP22.46■■□□□ 1.19
COL16A1-209ENST00000470799 CRYBG1Q9Y4K1 1723 aa22.45■■□□□ 1.19
COL16A1-209ENST00000470799 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
COL16A1-209ENST00000470799 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.45■■□□□ 1.18
COL16A1-209ENST00000470799 CPDO75976 1380 aa22.45■■□□□ 1.18
COL16A1-209ENST00000470799 TTC21AQ8NDW8 1320 aa22.44■■□□□ 1.18
COL16A1-209ENST00000470799 SPATA31A1Q5TZJ5 1347 aa22.43■■□□□ 1.18
COL16A1-209ENST00000470799 SLC24A1O60721 1099 aa22.43■■□□□ 1.18
COL16A1-209ENST00000470799 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
COL16A1-209ENST00000470799 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
COL16A1-209ENST00000470799 TERF2IPQ9NYB0 399 aa22.42■■□□□ 1.18
COL16A1-209ENST00000470799 NRKQ7Z2Y5 1582 aa22.42■■□□□ 1.18
COL16A1-209ENST00000470799 SSH2Q76I76 1423 aa22.41■■□□□ 1.18
COL16A1-209ENST00000470799 LARP1Q6PKG0 1096 aaKnown RBP22.41■■□□□ 1.18
COL16A1-209ENST00000470799 KCNH5Q8NCM2 988 aa22.41■■□□□ 1.18
COL16A1-209ENST00000470799 CPSF1Q10570 1443 aaKnown RBP22.4■■□□□ 1.18
COL16A1-209ENST00000470799 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
COL16A1-209ENST00000470799 TESK2Q96S53 571 aa22.38■■□□□ 1.17
COL16A1-209ENST00000470799 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
COL16A1-209ENST00000470799 CAMTA1Q9Y6Y1 1673 aa22.37■■□□□ 1.17
COL16A1-209ENST00000470799 FAM182BQ5T319 152 aa22.37■■□□□ 1.17
COL16A1-209ENST00000470799 TCP11L2Q8N4U5 519 aa22.37■■□□□ 1.17
COL16A1-209ENST00000470799 USP47Q96K76 1375 aa22.37■■□□□ 1.17
COL16A1-209ENST00000470799 TMF1P82094 1093 aa22.36■■□□□ 1.17
COL16A1-209ENST00000470799 AATKQ6ZMQ8 1374 aa22.36■■□□□ 1.17
COL16A1-209ENST00000470799 EP400Q96L91 3159 aa22.36■■□□□ 1.17
COL16A1-209ENST00000470799 PDE3BQ13370 1112 aa22.35■■□□□ 1.17
COL16A1-209ENST00000470799 NME9Q86XW9 330 aa22.35■■□□□ 1.17
COL16A1-209ENST00000470799 ZRANB1Q9UGI0 708 aa22.35■■□□□ 1.17
COL16A1-209ENST00000470799 BRWD3Q6RI45 1802 aa22.35■■□□□ 1.17
COL16A1-209ENST00000470799 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
COL16A1-209ENST00000470799 BARGINQ6ZT62 677 aa22.34■■□□□ 1.17
COL16A1-209ENST00000470799 TOM1L2Q6ZVM7 507 aa22.34■■□□□ 1.17
COL16A1-209ENST00000470799 PIK3C2AO00443 1686 aa22.33■■□□□ 1.17
COL16A1-209ENST00000470799 SLIT3O75094 1523 aa22.33■■□□□ 1.17
COL16A1-209ENST00000470799 DEFB132Q7Z7B7 95 aa22.33■■□□□ 1.17
COL16A1-209ENST00000470799 THRAP3Q9Y2W1 955 aaKnown RBP22.33■■□□□ 1.17
COL16A1-209ENST00000470799 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
COL16A1-209ENST00000470799 AKAP12Q02952 1782 aa22.32■■□□□ 1.16
COL16A1-209ENST00000470799 COL5A2P05997 1499 aaPredicted RBP22.31■■□□□ 1.16
COL16A1-209ENST00000470799 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
COL16A1-209ENST00000470799 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
COL16A1-209ENST00000470799 CD163L1Q9NR16 1453 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms