RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 ITSN1Q15811 1721 aa12.02□□□□□ -0.49
LMCD1-207ENST00000470776 AKAP12Q02952 1782 aa12.02□□□□□ -0.49
LMCD1-207ENST00000470776 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.49
LMCD1-207ENST00000470776 MON2Q7Z3U7 1717 aa12.01□□□□□ -0.49
LMCD1-207ENST00000470776 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
LMCD1-207ENST00000470776 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
LMCD1-207ENST00000470776 PMFBP1Q8TBY8 1022 aa12.01□□□□□ -0.49
LMCD1-207ENST00000470776 GGNBP2Q9H3C7 697 aa12.01□□□□□ -0.49
LMCD1-207ENST00000470776 INSRP06213 1382 aa12.01□□□□□ -0.49
LMCD1-207ENST00000470776 USP31Q70CQ4 1352 aa12□□□□□ -0.49
LMCD1-207ENST00000470776 MST1RQ04912 1400 aa12□□□□□ -0.49
LMCD1-207ENST00000470776 ATF3P18847 181 aa11.99□□□□□ -0.49
LMCD1-207ENST00000470776 NME9Q86XW9 330 aa11.99□□□□□ -0.49
LMCD1-207ENST00000470776 MSH6P52701 1360 aa11.99□□□□□ -0.49
LMCD1-207ENST00000470776 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
LMCD1-207ENST00000470776 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
LMCD1-207ENST00000470776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
LMCD1-207ENST00000470776 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
LMCD1-207ENST00000470776 OVOS2A0A0J9YW53 1432 aa11.97□□□□□ -0.49
LMCD1-207ENST00000470776 OVOS2Q6IE36 1432 aa11.97□□□□□ -0.49
LMCD1-207ENST00000470776 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
LMCD1-207ENST00000470776 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
LMCD1-207ENST00000470776 MTHFSP49914 203 aa11.96□□□□□ -0.49
LMCD1-207ENST00000470776 COG3Q96JB2 828 aa11.96□□□□□ -0.49
LMCD1-207ENST00000470776 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
LMCD1-207ENST00000470776 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
LMCD1-207ENST00000470776 PNPLA6Q8IY17 1366 aa11.95□□□□□ -0.5
LMCD1-207ENST00000470776 FAM9BQ8IZU0 186 aa11.95□□□□□ -0.5
LMCD1-207ENST00000470776 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
LMCD1-207ENST00000470776 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
LMCD1-207ENST00000470776 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
LMCD1-207ENST00000470776 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
LMCD1-207ENST00000470776 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
LMCD1-207ENST00000470776 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
LMCD1-207ENST00000470776 PSME1Q06323 249 aa11.93□□□□□ -0.5
LMCD1-207ENST00000470776 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
LMCD1-207ENST00000470776 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
LMCD1-207ENST00000470776 POLKQ9UBT6 870 aa11.93□□□□□ -0.5
LMCD1-207ENST00000470776 FOXO3O43524 673 aa11.92□□□□□ -0.5
LMCD1-207ENST00000470776 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
LMCD1-207ENST00000470776 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
LMCD1-207ENST00000470776 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
LMCD1-207ENST00000470776 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
LMCD1-207ENST00000470776 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
LMCD1-207ENST00000470776 ADAMTS8Q9UP79 889 aa11.91□□□□□ -0.5
LMCD1-207ENST00000470776 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
LMCD1-207ENST00000470776 COL3A1P02461 1466 aaPredicted RBP11.9□□□□□ -0.5
LMCD1-207ENST00000470776 NLRP6P59044 892 aa11.9□□□□□ -0.5
LMCD1-207ENST00000470776 BRINP3Q76B58 766 aa11.9□□□□□ -0.5
LMCD1-207ENST00000470776 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-207ENST00000470776 WDR43Q15061 677 aaKnown RBP eCLIP11.89□□□□□ -0.51
LMCD1-207ENST00000470776 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
LMCD1-207ENST00000470776 PIK3C2AO00443 1686 aa11.89□□□□□ -0.51
LMCD1-207ENST00000470776 KIF24Q5T7B8 1368 aa11.89□□□□□ -0.51
LMCD1-207ENST00000470776 FBLN1P23142 703 aa11.88□□□□□ -0.51
LMCD1-207ENST00000470776 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
LMCD1-207ENST00000470776 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
LMCD1-207ENST00000470776 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
LMCD1-207ENST00000470776 CDK12Q9NYV4 1490 aaPredicted RBP11.88□□□□□ -0.51
LMCD1-207ENST00000470776 USP19O94966 1318 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 SOS2Q07890 1332 aaPredicted RBP11.87□□□□□ -0.51
LMCD1-207ENST00000470776 TOM1O60784 492 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 PAK3O75914 559 aaPredicted RBP11.87□□□□□ -0.51
LMCD1-207ENST00000470776 MYT1Q01538 1121 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 PXDNQ92626 1479 aa11.87□□□□□ -0.51
LMCD1-207ENST00000470776 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
LMCD1-207ENST00000470776 DIAPH1O60610 1272 aaKnown RBP11.86□□□□□ -0.51
LMCD1-207ENST00000470776 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
LMCD1-207ENST00000470776 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
LMCD1-207ENST00000470776 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
LMCD1-207ENST00000470776 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
LMCD1-207ENST00000470776 IL13P35225 146 aa11.85□□□□□ -0.51
LMCD1-207ENST00000470776 RRS1Q15050 365 aaKnown RBP11.85□□□□□ -0.51
LMCD1-207ENST00000470776 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
LMCD1-207ENST00000470776 MARF1Q9Y4F3 1742 aaKnown RBP11.85□□□□□ -0.51
LMCD1-207ENST00000470776 SLIT3O75094 1523 aa11.85□□□□□ -0.51
LMCD1-207ENST00000470776 MAP3K19Q56UN5 1328 aa11.85□□□□□ -0.51
LMCD1-207ENST00000470776 XPCQ01831 940 aaPredicted RBP11.84□□□□□ -0.51
LMCD1-207ENST00000470776 TNS3Q68CZ2 1445 aa11.84□□□□□ -0.51
LMCD1-207ENST00000470776 FLT4P35916 1363 aa11.83□□□□□ -0.52
LMCD1-207ENST00000470776 NFAT5O94916 1531 aa11.83□□□□□ -0.52
LMCD1-207ENST00000470776 GCP02774 474 aa11.83□□□□□ -0.52
LMCD1-207ENST00000470776 HSPA1LP34931 641 aa11.83□□□□□ -0.52
LMCD1-207ENST00000470776 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
LMCD1-207ENST00000470776 ALS2Q96Q42 1657 aa11.83□□□□□ -0.52
LMCD1-207ENST00000470776 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 ARHGEF10O15013 1369 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 FCHSD2O94868 740 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 ADRA2BP18089 450 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
LMCD1-207ENST00000470776 PPM1GO15355 546 aaPredicted RBP11.81□□□□□ -0.52
LMCD1-207ENST00000470776 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
LMCD1-207ENST00000470776 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
LMCD1-207ENST00000470776 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
LMCD1-207ENST00000470776 IP6K1Q92551 441 aa11.81□□□□□ -0.52
LMCD1-207ENST00000470776 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
LMCD1-207ENST00000470776 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms