RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 ONECUT3O60422 494 aaPredicted RBP19.58■□□□□ 0.72
ABCA4-204ENST00000470771 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
ABCA4-204ENST00000470771 PRDM11Q9NQV5 511 aa19.58■□□□□ 0.72
ABCA4-204ENST00000470771 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.58■□□□□ 0.72
ABCA4-204ENST00000470771 ITSN1Q15811 1721 aa19.57■□□□□ 0.72
ABCA4-204ENST00000470771 ABTB2Q8N961 1025 aa19.57■□□□□ 0.72
ABCA4-204ENST00000470771 POLR3AO14802 1390 aaPredicted RBP19.57■□□□□ 0.72
ABCA4-204ENST00000470771 A0A0G2JS52 829 aa19.56■□□□□ 0.72
ABCA4-204ENST00000470771 MYT1Q01538 1121 aa19.56■□□□□ 0.72
ABCA4-204ENST00000470771 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
ABCA4-204ENST00000470771 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
ABCA4-204ENST00000470771 TRPM3Q9HCF6 1732 aaPredicted RBP19.55■□□□□ 0.72
ABCA4-204ENST00000470771 ROCK2O75116 1388 aaKnown RBP19.55■□□□□ 0.72
ABCA4-204ENST00000470771 NWD2Q9ULI1 1742 aa19.54■□□□□ 0.72
ABCA4-204ENST00000470771 SF3B2Q13435 895 aaKnown RBP19.54■□□□□ 0.72
ABCA4-204ENST00000470771 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
ABCA4-204ENST00000470771 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
ABCA4-204ENST00000470771 BRD4O60885 1362 aaPredicted RBP19.53■□□□□ 0.72
ABCA4-204ENST00000470771 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
ABCA4-204ENST00000470771 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
ABCA4-204ENST00000470771 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
ABCA4-204ENST00000470771 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
ABCA4-204ENST00000470771 EVA1CP58658 441 aa19.51■□□□□ 0.71
ABCA4-204ENST00000470771 ZC3H6P61129 1189 aaKnown RBP19.51■□□□□ 0.71
ABCA4-204ENST00000470771 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
ABCA4-204ENST00000470771 FAM98CQ17RN3 349 aaKnown RBP19.51■□□□□ 0.71
ABCA4-204ENST00000470771 GLI3P10071 1580 aa19.51■□□□□ 0.71
ABCA4-204ENST00000470771 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
ABCA4-204ENST00000470771 COL14A1Q05707 1796 aaKnown RBP19.49■□□□□ 0.71
ABCA4-204ENST00000470771 PLCH1Q4KWH8 1693 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 SRCAPQ6ZRS2 3230 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 ZRANB1Q9UGI0 708 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 SPATA31A5Q5VU36 1347 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 SPATA31A7Q8IWB4 1347 aa19.49■□□□□ 0.71
ABCA4-204ENST00000470771 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
ABCA4-204ENST00000470771 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
ABCA4-204ENST00000470771 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
ABCA4-204ENST00000470771 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
ABCA4-204ENST00000470771 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.71
ABCA4-204ENST00000470771 GCP02774 474 aa19.46■□□□□ 0.71
ABCA4-204ENST00000470771 CARD11Q9BXL7 1154 aa19.46■□□□□ 0.71
ABCA4-204ENST00000470771 NLRP6P59044 892 aa19.45■□□□□ 0.7
ABCA4-204ENST00000470771 TOPAZ1Q8N9V7 1692 aa19.44■□□□□ 0.7
ABCA4-204ENST00000470771 QRICH2Q9H0J4 1663 aa19.44■□□□□ 0.7
ABCA4-204ENST00000470771 TRPM1Q7Z4N2 1603 aa19.43■□□□□ 0.7
ABCA4-204ENST00000470771 USP19O94966 1318 aa19.43■□□□□ 0.7
ABCA4-204ENST00000470771 CPDO75976 1380 aa19.43■□□□□ 0.7
ABCA4-204ENST00000470771 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
ABCA4-204ENST00000470771 USP6P35125 1406 aa19.42■□□□□ 0.7
ABCA4-204ENST00000470771 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
ABCA4-204ENST00000470771 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
ABCA4-204ENST00000470771 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
ABCA4-204ENST00000470771 BAG6P46379 1132 aa19.38■□□□□ 0.69
ABCA4-204ENST00000470771 NRAPQ86VF7 1730 aa19.38■□□□□ 0.69
ABCA4-204ENST00000470771 KCNH5Q8NCM2 988 aa19.38■□□□□ 0.69
ABCA4-204ENST00000470771 CRYBG1Q9Y4K1 1723 aa19.37■□□□□ 0.69
ABCA4-204ENST00000470771 PDE3BQ13370 1112 aa19.37■□□□□ 0.69
ABCA4-204ENST00000470771 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
ABCA4-204ENST00000470771 TCP11L2Q8N4U5 519 aa19.37■□□□□ 0.69
ABCA4-204ENST00000470771 THRAP3Q9Y2W1 955 aaKnown RBP19.37■□□□□ 0.69
ABCA4-204ENST00000470771 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
ABCA4-204ENST00000470771 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
ABCA4-204ENST00000470771 SBNO2Q9Y2G9 1366 aa19.36■□□□□ 0.69
ABCA4-204ENST00000470771 TTC21AQ8NDW8 1320 aa19.36■□□□□ 0.69
ABCA4-204ENST00000470771 LARP1Q6PKG0 1096 aaKnown RBP19.36■□□□□ 0.69
ABCA4-204ENST00000470771 FAM196AQ6ZSG2 479 aa19.36■□□□□ 0.69
ABCA4-204ENST00000470771 DEFB132Q7Z7B7 95 aa19.36■□□□□ 0.69
ABCA4-204ENST00000470771 SSH2Q76I76 1423 aa19.35■□□□□ 0.69
ABCA4-204ENST00000470771 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
ABCA4-204ENST00000470771 KTN1Q86UP2 1357 aaKnown RBP19.34■□□□□ 0.69
ABCA4-204ENST00000470771 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
ABCA4-204ENST00000470771 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.69
ABCA4-204ENST00000470771 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.68
ABCA4-204ENST00000470771 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
ABCA4-204ENST00000470771 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
ABCA4-204ENST00000470771 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
ABCA4-204ENST00000470771 TERF2IPQ9NYB0 399 aa19.32■□□□□ 0.68
ABCA4-204ENST00000470771 CAMTA1Q9Y6Y1 1673 aa19.32■□□□□ 0.68
ABCA4-204ENST00000470771 C11orf95C9JLR9 678 aaPredicted RBP19.31■□□□□ 0.68
ABCA4-204ENST00000470771 CPSF1Q10570 1443 aaKnown RBP19.3■□□□□ 0.68
ABCA4-204ENST00000470771 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
ABCA4-204ENST00000470771 SOX12O15370 315 aa19.28■□□□□ 0.68
ABCA4-204ENST00000470771 ARHGEF25Q86VW2 580 aa19.28■□□□□ 0.68
ABCA4-204ENST00000470771 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.28■□□□□ 0.68
ABCA4-204ENST00000470771 CRB1P82279 1406 aa19.27■□□□□ 0.68
ABCA4-204ENST00000470771 TRIM37O94972 964 aa19.27■□□□□ 0.68
ABCA4-204ENST00000470771 SLC12A5Q9H2X9 1139 aa19.27■□□□□ 0.68
ABCA4-204ENST00000470771 COL5A2P05997 1499 aaPredicted RBP19.27■□□□□ 0.67
ABCA4-204ENST00000470771 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.67
ABCA4-204ENST00000470771 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
ABCA4-204ENST00000470771 CSB-PGBD3P0DP91 1061 aa19.26■□□□□ 0.67
ABCA4-204ENST00000470771 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
ABCA4-204ENST00000470771 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
ABCA4-204ENST00000470771 SLIT3O75094 1523 aa19.25■□□□□ 0.67
ABCA4-204ENST00000470771 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
ABCA4-204ENST00000470771 LMO7Q8WWI1 1683 aa19.24■□□□□ 0.67
ABCA4-204ENST00000470771 APBA3O96018 575 aa19.24■□□□□ 0.67
ABCA4-204ENST00000470771 AXIN2Q9Y2T1 843 aa19.24■□□□□ 0.67
ABCA4-204ENST00000470771 DDB1Q16531 1140 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms