RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 SKOR1P84550 965 aa8.47□□□□□ -1.05
BRCA2-202ENST00000470094 FOXC1Q12948 553 aa8.47□□□□□ -1.05
BRCA2-202ENST00000470094 MTMR14Q8NCE2 650 aa8.47□□□□□ -1.05
BRCA2-202ENST00000470094 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
BRCA2-202ENST00000470094 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
BRCA2-202ENST00000470094 SH3BP2P78314 561 aa8.46□□□□□ -1.06
BRCA2-202ENST00000470094 EPS8L1Q8TE68 723 aa8.46□□□□□ -1.06
BRCA2-202ENST00000470094 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.06
BRCA2-202ENST00000470094 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
BRCA2-202ENST00000470094 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.06
BRCA2-202ENST00000470094 WNT7AO00755 349 aa8.45□□□□□ -1.06
BRCA2-202ENST00000470094 MCM6Q14566 821 aa8.45□□□□□ -1.06
BRCA2-202ENST00000470094 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
BRCA2-202ENST00000470094 EHBP1Q8NDI1 1231 aa8.45□□□□□ -1.06
BRCA2-202ENST00000470094 ZC3H4Q9UPT8 1303 aaKnown RBP8.45□□□□□ -1.06
BRCA2-202ENST00000470094 AGERQ15109 404 aa8.44□□□□□ -1.06
BRCA2-202ENST00000470094 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
BRCA2-202ENST00000470094 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
BRCA2-202ENST00000470094 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
BRCA2-202ENST00000470094 FLIIQ13045 1269 aa8.43□□□□□ -1.06
BRCA2-202ENST00000470094 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
BRCA2-202ENST00000470094 PKD2L1Q9P0L9 805 aa8.43□□□□□ -1.06
BRCA2-202ENST00000470094 NDUFB9Q9Y6M9 179 aa8.43□□□□□ -1.06
BRCA2-202ENST00000470094 GDF9O60383 454 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PRR20EP86478 221 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PRR20CP86479 221 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PRR20DP86480 221 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PRR20BP86481 221 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PRR20AP86496 221 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 PDXDC2PQ6P474 469 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 MRGPRX2Q96LB1 330 aa8.42□□□□□ -1.06
BRCA2-202ENST00000470094 VARSP26640 1264 aaKnown RBP8.41□□□□□ -1.06
BRCA2-202ENST00000470094 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 GFRA3O60609 400 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 PTK2Q05397 1052 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 LAPTM4AQ15012 233 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 SH3BP5LQ7L8J4 393 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 CYP4X1Q8N118 509 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 ARHGAP9Q9BRR9 750 aa8.4□□□□□ -1.06
BRCA2-202ENST00000470094 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
BRCA2-202ENST00000470094 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
BRCA2-202ENST00000470094 CARD14Q9BXL6 1004 aa8.39□□□□□ -1.07
BRCA2-202ENST00000470094 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
BRCA2-202ENST00000470094 TTC24A2A3L6 582 aaPredicted RBP8.38□□□□□ -1.07
BRCA2-202ENST00000470094 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
BRCA2-202ENST00000470094 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
BRCA2-202ENST00000470094 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
BRCA2-202ENST00000470094 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
BRCA2-202ENST00000470094 UBTFP17480 764 aaKnown RBP8.37□□□□□ -1.07
BRCA2-202ENST00000470094 SNIP1Q8TAD8 396 aaKnown RBP8.37□□□□□ -1.07
BRCA2-202ENST00000470094 SIAH2O43255 324 aa8.36□□□□□ -1.07
BRCA2-202ENST00000470094 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
BRCA2-202ENST00000470094 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
BRCA2-202ENST00000470094 ZBBXA8MT70 800 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 RAD21O60216 631 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 GPR37L1O60883 481 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 C1QTNF2Q9BXJ5 285 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
BRCA2-202ENST00000470094 ABL2P42684 1182 aa8.34□□□□□ -1.07
BRCA2-202ENST00000470094 ARID5BQ14865 1188 aa8.34□□□□□ -1.07
BRCA2-202ENST00000470094 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
BRCA2-202ENST00000470094 ADAM32Q8TC27 787 aa8.34□□□□□ -1.07
BRCA2-202ENST00000470094 FAM187AA6NFU0 413 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 TRMT44Q8IYL2 757 aaKnown RBP8.33□□□□□ -1.08
BRCA2-202ENST00000470094 MPNDQ8N594 471 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 SLC10A4Q96EP9 437 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 OCSTAMPQ9BR26 566 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 COG6Q9Y2V7 657 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 GTF3C3Q9Y5Q9 886 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
BRCA2-202ENST00000470094 NR1H3Q13133 447 aa8.32□□□□□ -1.08
BRCA2-202ENST00000470094 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
BRCA2-202ENST00000470094 WWC1Q8IX03 1113 aa8.32□□□□□ -1.08
BRCA2-202ENST00000470094 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
BRCA2-202ENST00000470094 J3QL48 77 aa8.31□□□□□ -1.08
BRCA2-202ENST00000470094 VASH1Q7L8A9 365 aaPredicted RBP8.31□□□□□ -1.08
BRCA2-202ENST00000470094 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
BRCA2-202ENST00000470094 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
BRCA2-202ENST00000470094 CDK15Q96Q40 435 aa8.31□□□□□ -1.08
BRCA2-202ENST00000470094 CDV3Q9UKY7 258 aaKnown RBP8.31□□□□□ -1.08
BRCA2-202ENST00000470094 DGAT1O75907 488 aa8.3□□□□□ -1.08
BRCA2-202ENST00000470094 ADH1CP00326 375 aa8.3□□□□□ -1.08
BRCA2-202ENST00000470094 SMPD1P17405 629 aa8.3□□□□□ -1.08
BRCA2-202ENST00000470094 IRF5Q13568 498 aa8.3□□□□□ -1.08
BRCA2-202ENST00000470094 MAP4K5Q9Y4K4 846 aa8.3□□□□□ -1.08
BRCA2-202ENST00000470094 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
BRCA2-202ENST00000470094 Q6ZNB5 142 aa8.29□□□□□ -1.08
BRCA2-202ENST00000470094 ZNF592Q92610 1267 aa8.29□□□□□ -1.08
BRCA2-202ENST00000470094 PCDHB9Q9Y5E1 797 aa8.29□□□□□ -1.08
BRCA2-202ENST00000470094 NBPF20Q3BBV1 942 aa8.28□□□□□ -1.08
BRCA2-202ENST00000470094 FSHRP23945 695 aa8.27□□□□□ -1.09
BRCA2-202ENST00000470094 VAC14Q08AM6 782 aa8.27□□□□□ -1.09
BRCA2-202ENST00000470094 NR5A1Q13285 461 aa8.27□□□□□ -1.09
BRCA2-202ENST00000470094 NNTQ13423 1086 aa8.27□□□□□ -1.09
BRCA2-202ENST00000470094 MCCD1P59942 119 aaPredicted RBP8.26□□□□□ -1.09
BRCA2-202ENST00000470094 EIF4G2P78344 907 aaKnown RBP eCLIP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms