RNA–Protein interactions for RNA: ENST00000470065.3

RN7SL401P-201, Transcript of RNA, 7SL, cytoplasmic 401, pseudogene, humanhuman

BASIC

Gene RN7SL401P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL401P-201ENST00000470065 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
RN7SL401P-201ENST00000470065 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
RN7SL401P-201ENST00000470065 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
RN7SL401P-201ENST00000470065 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
RN7SL401P-201ENST00000470065 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
RN7SL401P-201ENST00000470065 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
RN7SL401P-201ENST00000470065 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 PLCH1Q4KWH8 1693 aa12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 TOPAZ1Q8N9V7 1692 aa12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 ALS2Q96Q42 1657 aa12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
RN7SL401P-201ENST00000470065 SLIT2O94813 1529 aa12.52□□□□□ -0.4
RN7SL401P-201ENST00000470065 FAM83GA6ND36 823 aa12.52□□□□□ -0.41
RN7SL401P-201ENST00000470065 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
RN7SL401P-201ENST00000470065 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
RN7SL401P-201ENST00000470065 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
RN7SL401P-201ENST00000470065 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
RN7SL401P-201ENST00000470065 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
RN7SL401P-201ENST00000470065 POLR3AO14802 1390 aaPredicted RBP12.51□□□□□ -0.41
RN7SL401P-201ENST00000470065 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
RN7SL401P-201ENST00000470065 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
RN7SL401P-201ENST00000470065 VPS72Q15906 364 aa12.5□□□□□ -0.41
RN7SL401P-201ENST00000470065 RALGAPBQ86X10 1494 aa12.5□□□□□ -0.41
RN7SL401P-201ENST00000470065 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
RN7SL401P-201ENST00000470065 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
RN7SL401P-201ENST00000470065 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
RN7SL401P-201ENST00000470065 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
RN7SL401P-201ENST00000470065 EVA1CP58658 441 aa12.48□□□□□ -0.41
RN7SL401P-201ENST00000470065 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
RN7SL401P-201ENST00000470065 NLRP6P59044 892 aa12.47□□□□□ -0.41
RN7SL401P-201ENST00000470065 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
RN7SL401P-201ENST00000470065 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
RN7SL401P-201ENST00000470065 PHRF1Q9P1Y6 1649 aaKnown RBP12.47□□□□□ -0.41
RN7SL401P-201ENST00000470065 GLI3P10071 1580 aa12.47□□□□□ -0.41
RN7SL401P-201ENST00000470065 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.41
RN7SL401P-201ENST00000470065 USP6P35125 1406 aa12.45□□□□□ -0.42
RN7SL401P-201ENST00000470065 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
RN7SL401P-201ENST00000470065 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
RN7SL401P-201ENST00000470065 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
RN7SL401P-201ENST00000470065 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
RN7SL401P-201ENST00000470065 SOX12O15370 315 aa12.44□□□□□ -0.42
RN7SL401P-201ENST00000470065 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
RN7SL401P-201ENST00000470065 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 NRAPQ86VF7 1730 aa12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 GCP02774 474 aa12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 KRT27Q7Z3Y8 459 aa12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
RN7SL401P-201ENST00000470065 SBNO2Q9Y2G9 1366 aa12.42□□□□□ -0.42
RN7SL401P-201ENST00000470065 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 USP19O94966 1318 aa12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 CCER1Q8TC90 406 aaPredicted RBP12.41□□□□□ -0.42
RN7SL401P-201ENST00000470065 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
RN7SL401P-201ENST00000470065 ST20-MTHFSA0A0A6YYL1 179 aa12.4□□□□□ -0.42
RN7SL401P-201ENST00000470065 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
RN7SL401P-201ENST00000470065 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
RN7SL401P-201ENST00000470065 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
RN7SL401P-201ENST00000470065 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
RN7SL401P-201ENST00000470065 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
RN7SL401P-201ENST00000470065 CPDO75976 1380 aa12.39□□□□□ -0.43
RN7SL401P-201ENST00000470065 PIK3C2AO00443 1686 aa12.38□□□□□ -0.43
RN7SL401P-201ENST00000470065 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
RN7SL401P-201ENST00000470065 SSH2Q76I76 1423 aa12.38□□□□□ -0.43
RN7SL401P-201ENST00000470065 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 TMF1P82094 1093 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 PDE3BQ13370 1112 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 SLC12A5Q9H2X9 1139 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 USP47Q96K76 1375 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
RN7SL401P-201ENST00000470065 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
RN7SL401P-201ENST00000470065 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
RN7SL401P-201ENST00000470065 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
RN7SL401P-201ENST00000470065 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
RN7SL401P-201ENST00000470065 CPSF1Q10570 1443 aaKnown RBP12.36□□□□□ -0.43
RN7SL401P-201ENST00000470065 CAMTA1Q9Y6Y1 1673 aa12.35□□□□□ -0.43
RN7SL401P-201ENST00000470065 EP400Q96L91 3159 aa12.35□□□□□ -0.43
RN7SL401P-201ENST00000470065 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
RN7SL401P-201ENST00000470065 TIMELESSQ9UNS1 1208 aa12.35□□□□□ -0.43
RN7SL401P-201ENST00000470065 SLIT3O75094 1523 aa12.35□□□□□ -0.43
RN7SL401P-201ENST00000470065 BAG6P46379 1132 aa12.34□□□□□ -0.43
RN7SL401P-201ENST00000470065 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
RN7SL401P-201ENST00000470065 NME9Q86XW9 330 aa12.34□□□□□ -0.43
RN7SL401P-201ENST00000470065 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
RN7SL401P-201ENST00000470065 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 LMO7Q8WWI1 1683 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 TESK2Q96S53 571 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
RN7SL401P-201ENST00000470065 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms