RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 VPS72Q15906 364 aa24.39■■□□□ 1.49
C4A-250ENST00000469975 COL14A1Q05707 1796 aaKnown RBP24.39■■□□□ 1.49
C4A-250ENST00000469975 SIN3AQ96ST3 1273 aa24.38■■□□□ 1.49
C4A-250ENST00000469975 QRICH2Q9H0J4 1663 aa24.37■■□□□ 1.49
C4A-250ENST00000469975 SEPT12Q8IYM1 358 aa24.36■■□□□ 1.49
C4A-250ENST00000469975 PHRF1Q9P1Y6 1649 aaKnown RBP24.35■■□□□ 1.49
C4A-250ENST00000469975 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
C4A-250ENST00000469975 BTG4Q9NY30 223 aa24.35■■□□□ 1.49
C4A-250ENST00000469975 NUTM2GQ5VZR2 741 aa24.34■■□□□ 1.49
C4A-250ENST00000469975 ACEP12821 1306 aa24.33■■□□□ 1.48
C4A-250ENST00000469975 NEUROD1Q13562 356 aa24.31■■□□□ 1.48
C4A-250ENST00000469975 TRPM1Q7Z4N2 1603 aa24.31■■□□□ 1.48
C4A-250ENST00000469975 CENPJQ9HC77 1338 aaPredicted RBP24.31■■□□□ 1.48
C4A-250ENST00000469975 POLR3AO14802 1390 aaPredicted RBP24.3■■□□□ 1.48
C4A-250ENST00000469975 NBPF8Q3BBV2 869 aa24.3■■□□□ 1.48
C4A-250ENST00000469975 CCDC61Q9Y6R9 512 aa24.3■■□□□ 1.48
C4A-250ENST00000469975 CABP2Q9NPB3 220 aa24.29■■□□□ 1.48
C4A-250ENST00000469975 A0A0G2JS52 829 aa24.28■■□□□ 1.48
C4A-250ENST00000469975 ONECUT3O60422 494 aaPredicted RBP24.28■■□□□ 1.48
C4A-250ENST00000469975 SRPK2P78362 688 aaKnown RBP24.28■■□□□ 1.48
C4A-250ENST00000469975 MYT1Q01538 1121 aa24.28■■□□□ 1.48
C4A-250ENST00000469975 FAM98CQ17RN3 349 aaKnown RBP24.28■■□□□ 1.48
C4A-250ENST00000469975 PRDM11Q9NQV5 511 aa24.28■■□□□ 1.48
C4A-250ENST00000469975 KIAA0232Q92628 1395 aa24.28■■□□□ 1.48
C4A-250ENST00000469975 PLEKHG3A1L390 1219 aa24.27■■□□□ 1.48
C4A-250ENST00000469975 CHRNA2Q15822 529 aa24.27■■□□□ 1.48
C4A-250ENST00000469975 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
C4A-250ENST00000469975 ZC3H6P61129 1189 aaKnown RBP24.25■■□□□ 1.47
C4A-250ENST00000469975 KRT27Q7Z3Y8 459 aa24.25■■□□□ 1.47
C4A-250ENST00000469975 CCDC125Q86Z20 511 aa24.25■■□□□ 1.47
C4A-250ENST00000469975 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
C4A-250ENST00000469975 NRKQ7Z2Y5 1582 aa24.24■■□□□ 1.47
C4A-250ENST00000469975 DEFB132Q7Z7B7 95 aa24.23■■□□□ 1.47
C4A-250ENST00000469975 SPATA31A5Q5VU36 1347 aa24.23■■□□□ 1.47
C4A-250ENST00000469975 SPATA31A7Q8IWB4 1347 aa24.23■■□□□ 1.47
C4A-250ENST00000469975 THSD7AQ9UPZ6 1657 aa24.21■■□□□ 1.47
C4A-250ENST00000469975 FAM182BQ5T319 152 aa24.2■■□□□ 1.46
C4A-250ENST00000469975 ABTB2Q8N961 1025 aa24.2■■□□□ 1.46
C4A-250ENST00000469975 STRN4Q9NRL3 753 aa24.2■■□□□ 1.46
C4A-250ENST00000469975 ZRANB1Q9UGI0 708 aa24.18■■□□□ 1.46
C4A-250ENST00000469975 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
C4A-250ENST00000469975 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
C4A-250ENST00000469975 USP19O94966 1318 aa24.15■■□□□ 1.46
C4A-250ENST00000469975 SPATA31A1Q5TZJ5 1347 aa24.15■■□□□ 1.46
C4A-250ENST00000469975 LMO7Q8WWI1 1683 aa24.15■■□□□ 1.46
C4A-250ENST00000469975 CAMTA1Q9Y6Y1 1673 aa24.15■■□□□ 1.46
C4A-250ENST00000469975 SF3B2Q13435 895 aaKnown RBP24.14■■□□□ 1.45
C4A-250ENST00000469975 USP6P35125 1406 aa24.13■■□□□ 1.45
C4A-250ENST00000469975 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
C4A-250ENST00000469975 EVC2Q86UK5 1308 aa24.12■■□□□ 1.45
C4A-250ENST00000469975 PIK3C2AO00443 1686 aa24.12■■□□□ 1.45
C4A-250ENST00000469975 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
C4A-250ENST00000469975 RGPD1P0DJD0 1748 aa24.12■■□□□ 1.45
C4A-250ENST00000469975 AKAP12Q02952 1782 aa24.11■■□□□ 1.45
C4A-250ENST00000469975 GCP02774 474 aa24.1■■□□□ 1.45
C4A-250ENST00000469975 EVA1CP58658 441 aa24.1■■□□□ 1.45
C4A-250ENST00000469975 NLRP13Q86W25 1043 aa24.1■■□□□ 1.45
C4A-250ENST00000469975 CPDO75976 1380 aa24.1■■□□□ 1.45
C4A-250ENST00000469975 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
C4A-250ENST00000469975 ZBTB7CA1YPR0 619 aa24.09■■□□□ 1.45
C4A-250ENST00000469975 LARP1Q6PKG0 1096 aaKnown RBP24.09■■□□□ 1.45
C4A-250ENST00000469975 NLRP6P59044 892 aa24.07■■□□□ 1.44
C4A-250ENST00000469975 SLIT3O75094 1523 aa24.06■■□□□ 1.44
C4A-250ENST00000469975 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
C4A-250ENST00000469975 COL5A2P05997 1499 aaPredicted RBP24.04■■□□□ 1.44
C4A-250ENST00000469975 COL18A1P39060 1754 aa24.03■■□□□ 1.44
C4A-250ENST00000469975 SRCAPQ6ZRS2 3230 aa24.03■■□□□ 1.44
C4A-250ENST00000469975 BAG6P46379 1132 aa24.03■■□□□ 1.44
C4A-250ENST00000469975 EN1Q05925 392 aaPredicted RBP24.03■■□□□ 1.44
C4A-250ENST00000469975 RGPD5Q99666 1765 aa24.03■■□□□ 1.44
C4A-250ENST00000469975 TTC21BQ7Z4L5 1316 aa24.01■■□□□ 1.43
C4A-250ENST00000469975 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
C4A-250ENST00000469975 BARGINQ6ZT62 677 aa24■■□□□ 1.43
C4A-250ENST00000469975 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
C4A-250ENST00000469975 PSDA5PKW4 1024 aaPredicted RBP23.99■■□□□ 1.43
C4A-250ENST00000469975 SOX12O15370 315 aa23.99■■□□□ 1.43
C4A-250ENST00000469975 TCP11L2Q8N4U5 519 aa23.99■■□□□ 1.43
C4A-250ENST00000469975 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
C4A-250ENST00000469975 TRIM37O94972 964 aa23.98■■□□□ 1.43
C4A-250ENST00000469975 PARP4Q9UKK3 1724 aaKnown RBP23.98■■□□□ 1.43
C4A-250ENST00000469975 CPSF1Q10570 1443 aaKnown RBP23.97■■□□□ 1.43
C4A-250ENST00000469975 AATKQ6ZMQ8 1374 aa23.96■■□□□ 1.43
C4A-250ENST00000469975 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
C4A-250ENST00000469975 FAM196AQ6ZSG2 479 aa23.96■■□□□ 1.43
C4A-250ENST00000469975 ZNF692Q9BU19 519 aaPredicted RBP23.96■■□□□ 1.43
C4A-250ENST00000469975 CRB1P82279 1406 aa23.95■■□□□ 1.42
C4A-250ENST00000469975 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
C4A-250ENST00000469975 AXIN2Q9Y2T1 843 aa23.95■■□□□ 1.42
C4A-250ENST00000469975 WNK3Q9BYP7 1800 aa23.95■■□□□ 1.42
C4A-250ENST00000469975 EZH2Q15910 746 aaKnown RBP23.94■■□□□ 1.42
C4A-250ENST00000469975 DISP2A7MBM2 1401 aa23.93■■□□□ 1.42
C4A-250ENST00000469975 SBNO2Q9Y2G9 1366 aa23.93■■□□□ 1.42
C4A-250ENST00000469975 NFAT5O94916 1531 aa23.93■■□□□ 1.42
C4A-250ENST00000469975 CD163L1Q9NR16 1453 aa23.93■■□□□ 1.42
C4A-250ENST00000469975 LRRC37A3O60309 1634 aa23.92■■□□□ 1.42
C4A-250ENST00000469975 TTC21AQ8NDW8 1320 aa23.92■■□□□ 1.42
C4A-250ENST00000469975 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
C4A-250ENST00000469975 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.91■■□□□ 1.42
C4A-250ENST00000469975 APBA3O96018 575 aa23.9■■□□□ 1.42
C4A-250ENST00000469975 TOM1L2Q6ZVM7 507 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 570.2 ms