RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
CPSF4-210ENST00000469897 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
CPSF4-210ENST00000469897 SRPK2P78362 688 aaKnown RBP19.17■□□□□ 0.66
CPSF4-210ENST00000469897 PRDM11Q9NQV5 511 aa19.17■□□□□ 0.66
CPSF4-210ENST00000469897 NEUROD1Q13562 356 aa19.16■□□□□ 0.66
CPSF4-210ENST00000469897 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
CPSF4-210ENST00000469897 DEFB132Q7Z7B7 95 aa19.16■□□□□ 0.66
CPSF4-210ENST00000469897 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
CPSF4-210ENST00000469897 MARF1Q9Y4F3 1742 aaKnown RBP19.16■□□□□ 0.66
CPSF4-210ENST00000469897 SF3B2Q13435 895 aaKnown RBP19.15■□□□□ 0.66
CPSF4-210ENST00000469897 ATP7BP35670 1465 aa19.15■□□□□ 0.66
CPSF4-210ENST00000469897 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
CPSF4-210ENST00000469897 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
CPSF4-210ENST00000469897 BLMP54132 1417 aaPredicted RBP19.13■□□□□ 0.65
CPSF4-210ENST00000469897 POLR3AO14802 1390 aaPredicted RBP19.12■□□□□ 0.65
CPSF4-210ENST00000469897 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
CPSF4-210ENST00000469897 SPATA31A5Q5VU36 1347 aa19.12■□□□□ 0.65
CPSF4-210ENST00000469897 SPATA31A7Q8IWB4 1347 aa19.12■□□□□ 0.65
CPSF4-210ENST00000469897 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
CPSF4-210ENST00000469897 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.11■□□□□ 0.65
CPSF4-210ENST00000469897 FAM182BQ5T319 152 aa19.11■□□□□ 0.65
CPSF4-210ENST00000469897 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CPSF4-210ENST00000469897 EVA1CP58658 441 aa19.1■□□□□ 0.65
CPSF4-210ENST00000469897 TRPM3Q9HCF6 1732 aaPredicted RBP19.1■□□□□ 0.65
CPSF4-210ENST00000469897 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.64
CPSF4-210ENST00000469897 NLRP13Q86W25 1043 aa19.07■□□□□ 0.64
CPSF4-210ENST00000469897 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
CPSF4-210ENST00000469897 ALS2Q96Q42 1657 aa19.07■□□□□ 0.64
CPSF4-210ENST00000469897 SPATA31A1Q5TZJ5 1347 aa19.06■□□□□ 0.64
CPSF4-210ENST00000469897 GCP02774 474 aa19.06■□□□□ 0.64
CPSF4-210ENST00000469897 PPIP5K1Q6PFW1 1433 aa19.06■□□□□ 0.64
CPSF4-210ENST00000469897 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
CPSF4-210ENST00000469897 ABCA3Q99758 1704 aa19.04■□□□□ 0.64
CPSF4-210ENST00000469897 NWD2Q9ULI1 1742 aa19.04■□□□□ 0.64
CPSF4-210ENST00000469897 BAG6P46379 1132 aa19.03■□□□□ 0.64
CPSF4-210ENST00000469897 NLRP6P59044 892 aa19.03■□□□□ 0.64
CPSF4-210ENST00000469897 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
CPSF4-210ENST00000469897 COL14A1Q05707 1796 aaKnown RBP19.03■□□□□ 0.64
CPSF4-210ENST00000469897 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
CPSF4-210ENST00000469897 EN1Q05925 392 aaPredicted RBP19.02■□□□□ 0.64
CPSF4-210ENST00000469897 EP400Q96L91 3159 aa19.02■□□□□ 0.64
CPSF4-210ENST00000469897 KIAA1210Q9ULL0 1709 aa19.01■□□□□ 0.63
CPSF4-210ENST00000469897 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
CPSF4-210ENST00000469897 USP19O94966 1318 aa19■□□□□ 0.63
CPSF4-210ENST00000469897 ROCK2O75116 1388 aaKnown RBP19■□□□□ 0.63
CPSF4-210ENST00000469897 CPDO75976 1380 aa18.98■□□□□ 0.63
CPSF4-210ENST00000469897 BARGINQ6ZT62 677 aa18.98■□□□□ 0.63
CPSF4-210ENST00000469897 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
CPSF4-210ENST00000469897 TRIM37O94972 964 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 FAM196AQ6ZSG2 479 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
CPSF4-210ENST00000469897 BRD4O60885 1362 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-210ENST00000469897 ZNF692Q9BU19 519 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-210ENST00000469897 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
CPSF4-210ENST00000469897 ITSN1Q15811 1721 aa18.95■□□□□ 0.62
CPSF4-210ENST00000469897 USP6P35125 1406 aa18.95■□□□□ 0.62
CPSF4-210ENST00000469897 EZH2Q15910 746 aaKnown RBP18.95■□□□□ 0.62
CPSF4-210ENST00000469897 CAMTA1Q9Y6Y1 1673 aa18.95■□□□□ 0.62
CPSF4-210ENST00000469897 CRYBG1Q9Y4K1 1723 aa18.94■□□□□ 0.62
CPSF4-210ENST00000469897 TOPAZ1Q8N9V7 1692 aa18.93■□□□□ 0.62
CPSF4-210ENST00000469897 APBA3O96018 575 aa18.93■□□□□ 0.62
CPSF4-210ENST00000469897 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
CPSF4-210ENST00000469897 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
CPSF4-210ENST00000469897 TTC21BQ7Z4L5 1316 aa18.93■□□□□ 0.62
CPSF4-210ENST00000469897 SOX12O15370 315 aa18.92■□□□□ 0.62
CPSF4-210ENST00000469897 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
CPSF4-210ENST00000469897 SRCAPQ6ZRS2 3230 aa18.91■□□□□ 0.62
CPSF4-210ENST00000469897 CAMKK2Q96RR4 588 aa18.91■□□□□ 0.62
CPSF4-210ENST00000469897 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
CPSF4-210ENST00000469897 R3HDM1Q15032 1099 aaKnown RBP18.89■□□□□ 0.61
CPSF4-210ENST00000469897 TOM1L2Q6ZVM7 507 aa18.89■□□□□ 0.61
CPSF4-210ENST00000469897 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
CPSF4-210ENST00000469897 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
CPSF4-210ENST00000469897 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.61
CPSF4-210ENST00000469897 ARHGEF25Q86VW2 580 aa18.88■□□□□ 0.61
CPSF4-210ENST00000469897 THSD7AQ9UPZ6 1657 aa18.88■□□□□ 0.61
CPSF4-210ENST00000469897 TMC1Q8TDI8 760 aa18.87■□□□□ 0.61
CPSF4-210ENST00000469897 QRICH2Q9H0J4 1663 aa18.86■□□□□ 0.61
CPSF4-210ENST00000469897 COL5A2P05997 1499 aaPredicted RBP18.86■□□□□ 0.61
CPSF4-210ENST00000469897 KTN1Q86UP2 1357 aaKnown RBP18.86■□□□□ 0.61
CPSF4-210ENST00000469897 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
CPSF4-210ENST00000469897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
CPSF4-210ENST00000469897 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
CPSF4-210ENST00000469897 CRB1P82279 1406 aa18.85■□□□□ 0.61
CPSF4-210ENST00000469897 TONSLQ96HA7 1378 aa18.85■□□□□ 0.61
CPSF4-210ENST00000469897 SLC12A5Q9H2X9 1139 aa18.85■□□□□ 0.61
CPSF4-210ENST00000469897 CPSF1Q10570 1443 aaKnown RBP18.84■□□□□ 0.61
CPSF4-210ENST00000469897 DISP2A7MBM2 1401 aa18.83■□□□□ 0.61
CPSF4-210ENST00000469897 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
CPSF4-210ENST00000469897 DDB1Q16531 1140 aa18.83■□□□□ 0.6
CPSF4-210ENST00000469897 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
CPSF4-210ENST00000469897 SLIT3O75094 1523 aa18.82■□□□□ 0.6
CPSF4-210ENST00000469897 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
CPSF4-210ENST00000469897 NME9Q86XW9 330 aa18.81■□□□□ 0.6
CPSF4-210ENST00000469897 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
CPSF4-210ENST00000469897 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
CPSF4-210ENST00000469897 C11orf95C9JLR9 678 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms