RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SRRT-208ENST00000469602 CABLES1Q8TDN4 633 aa13.73□□□□□ -0.21
SRRT-208ENST00000469602 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
SRRT-208ENST00000469602 TESK2Q96S53 571 aa13.72□□□□□ -0.21
SRRT-208ENST00000469602 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.21
SRRT-208ENST00000469602 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
SRRT-208ENST00000469602 PLEKHG5O94827 1062 aa13.71□□□□□ -0.21
SRRT-208ENST00000469602 FNBP4Q8N3X1 1017 aaPredicted RBP13.71□□□□□ -0.21
SRRT-208ENST00000469602 USP6P35125 1406 aa13.71□□□□□ -0.22
SRRT-208ENST00000469602 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
SRRT-208ENST00000469602 MON2Q7Z3U7 1717 aa13.7□□□□□ -0.22
SRRT-208ENST00000469602 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.7□□□□□ -0.22
SRRT-208ENST00000469602 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
SRRT-208ENST00000469602 SOCS7O14512 581 aa13.69□□□□□ -0.22
SRRT-208ENST00000469602 PUS7Q96PZ0 661 aaKnown RBP13.69□□□□□ -0.22
SRRT-208ENST00000469602 USP21Q9UK80 565 aa13.69□□□□□ -0.22
SRRT-208ENST00000469602 NWD2Q9ULI1 1742 aa13.69□□□□□ -0.22
SRRT-208ENST00000469602 BCL9LQ86UU0 1499 aa13.68□□□□□ -0.22
SRRT-208ENST00000469602 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
SRRT-208ENST00000469602 CPSF1Q10570 1443 aaKnown RBP13.68□□□□□ -0.22
SRRT-208ENST00000469602 SSH2Q76I76 1423 aa13.68□□□□□ -0.22
SRRT-208ENST00000469602 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
SRRT-208ENST00000469602 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
SRRT-208ENST00000469602 SLIT2O94813 1529 aa13.68□□□□□ -0.22
SRRT-208ENST00000469602 PIK3C2AO00443 1686 aa13.67□□□□□ -0.22
SRRT-208ENST00000469602 RXRBP28702 533 aa13.67□□□□□ -0.22
SRRT-208ENST00000469602 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
SRRT-208ENST00000469602 COL14A1Q05707 1796 aaKnown RBP13.67□□□□□ -0.22
SRRT-208ENST00000469602 NUTM2GQ5VZR2 741 aa13.66□□□□□ -0.22
SRRT-208ENST00000469602 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
SRRT-208ENST00000469602 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
SRRT-208ENST00000469602 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
SRRT-208ENST00000469602 CD163L1Q9NR16 1453 aa13.66□□□□□ -0.22
SRRT-208ENST00000469602 ATRNO75882 1429 aa13.65□□□□□ -0.22
SRRT-208ENST00000469602 FAM83GA6ND36 823 aa13.65□□□□□ -0.22
SRRT-208ENST00000469602 TMF1P82094 1093 aa13.65□□□□□ -0.22
SRRT-208ENST00000469602 NINLQ9Y2I6 1382 aa13.65□□□□□ -0.22
SRRT-208ENST00000469602 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
SRRT-208ENST00000469602 USP19O94966 1318 aa13.64□□□□□ -0.23
SRRT-208ENST00000469602 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
SRRT-208ENST00000469602 NLRP13Q86W25 1043 aa13.64□□□□□ -0.23
SRRT-208ENST00000469602 SLC12A5Q9H2X9 1139 aa13.64□□□□□ -0.23
SRRT-208ENST00000469602 UNC5CLQ8IV45 518 aa13.63□□□□□ -0.23
SRRT-208ENST00000469602 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
SRRT-208ENST00000469602 TTC21BQ7Z4L5 1316 aa13.63□□□□□ -0.23
SRRT-208ENST00000469602 TTC21AQ8NDW8 1320 aa13.63□□□□□ -0.23
SRRT-208ENST00000469602 KIAA0232Q92628 1395 aa13.62□□□□□ -0.23
SRRT-208ENST00000469602 NLRP6P59044 892 aa13.62□□□□□ -0.23
SRRT-208ENST00000469602 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
SRRT-208ENST00000469602 HDGFL2Q7Z4V5 671 aaPredicted RBP13.62□□□□□ -0.23
SRRT-208ENST00000469602 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
SRRT-208ENST00000469602 A0A1W2PP64 1363 aa13.61□□□□□ -0.23
SRRT-208ENST00000469602 SLIT3O75094 1523 aa13.61□□□□□ -0.23
SRRT-208ENST00000469602 PRDM11Q9NQV5 511 aa13.61□□□□□ -0.23
SRRT-208ENST00000469602 CPDO75976 1380 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 USP54Q70EL1 1684 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 RGS12O14924 1447 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 GCP02774 474 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 GLI3P10071 1580 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
SRRT-208ENST00000469602 EIF4G2P78344 907 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRRT-208ENST00000469602 EDC4Q6P2E9 1401 aaKnown RBP13.6□□□□□ -0.23
SRRT-208ENST00000469602 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
SRRT-208ENST00000469602 BTG4Q9NY30 223 aa13.6□□□□□ -0.23
SRRT-208ENST00000469602 MYOM1P52179 1685 aa13.59□□□□□ -0.23
SRRT-208ENST00000469602 VPS72Q15906 364 aa13.59□□□□□ -0.23
SRRT-208ENST00000469602 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
SRRT-208ENST00000469602 CHRNA2Q15822 529 aa13.58□□□□□ -0.24
SRRT-208ENST00000469602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.24
SRRT-208ENST00000469602 LMO7Q8WWI1 1683 aa13.58□□□□□ -0.24
SRRT-208ENST00000469602 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
SRRT-208ENST00000469602 EP400Q96L91 3159 aa13.57□□□□□ -0.24
SRRT-208ENST00000469602 USP31Q70CQ4 1352 aa13.57□□□□□ -0.24
SRRT-208ENST00000469602 NME9Q86XW9 330 aa13.56□□□□□ -0.24
SRRT-208ENST00000469602 KCNH5Q8NCM2 988 aa13.56□□□□□ -0.24
SRRT-208ENST00000469602 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
SRRT-208ENST00000469602 CAMTA1Q9Y6Y1 1673 aa13.56□□□□□ -0.24
SRRT-208ENST00000469602 NFAT5O94916 1531 aa13.55□□□□□ -0.24
SRRT-208ENST00000469602 COL18A1P39060 1754 aa13.55□□□□□ -0.24
SRRT-208ENST00000469602 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
SRRT-208ENST00000469602 LTN1O94822 1766 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 RGPD5Q99666 1765 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 BRWD3Q6RI45 1802 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 SPATA31A5Q5VU36 1347 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 SPATA31A7Q8IWB4 1347 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
SRRT-208ENST00000469602 ZBTB7CA1YPR0 619 aa13.52□□□□□ -0.25
SRRT-208ENST00000469602 SOX12O15370 315 aa13.52□□□□□ -0.25
SRRT-208ENST00000469602 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
SRRT-208ENST00000469602 ARHGEF25Q86VW2 580 aa13.52□□□□□ -0.25
SRRT-208ENST00000469602 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
SRRT-208ENST00000469602 ABCC6O95255 1503 aa13.51□□□□□ -0.25
SRRT-208ENST00000469602 EVA1CP58658 441 aa13.51□□□□□ -0.25
SRRT-208ENST00000469602 SPATA31A1Q5TZJ5 1347 aa13.5□□□□□ -0.25
SRRT-208ENST00000469602 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
SRRT-208ENST00000469602 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms