RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 MAP3K4Q9Y6R4 1608 aa10.35□□□□□ -0.75
TMC1-203ENST00000469455 FGD6Q6ZV73 1430 aa10.34□□□□□ -0.75
TMC1-203ENST00000469455 PTPN23Q9H3S7 1636 aa10.34□□□□□ -0.75
TMC1-203ENST00000469455 FNBP4Q8N3X1 1017 aaPredicted RBP10.34□□□□□ -0.75
TMC1-203ENST00000469455 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
TMC1-203ENST00000469455 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
TMC1-203ENST00000469455 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
TMC1-203ENST00000469455 POM121Q96HA1 1249 aa10.33□□□□□ -0.76
TMC1-203ENST00000469455 TCOF1Q13428 1488 aaKnown RBP10.32□□□□□ -0.76
TMC1-203ENST00000469455 CCNB3Q8WWL7 1395 aa10.32□□□□□ -0.76
TMC1-203ENST00000469455 KDM4AO75164 1064 aa10.32□□□□□ -0.76
TMC1-203ENST00000469455 NDUFV2P19404 249 aa10.32□□□□□ -0.76
TMC1-203ENST00000469455 USP46P62068 366 aa10.32□□□□□ -0.76
TMC1-203ENST00000469455 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
TMC1-203ENST00000469455 LILRB3O75022 631 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 GCGRP47871 477 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 CSPP1Q1MSJ5 1256 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 SLC4A5Q9BY07 1137 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 RABGEF1Q9UJ41 708 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
TMC1-203ENST00000469455 SAMD9LQ8IVG5 1584 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
TMC1-203ENST00000469455 ARHGAP33O14559 1287 aa10.3□□□□□ -0.76
TMC1-203ENST00000469455 PSEN2P49810 448 aa10.3□□□□□ -0.76
TMC1-203ENST00000469455 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
TMC1-203ENST00000469455 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
TMC1-203ENST00000469455 PLCH2O75038 1416 aa10.3□□□□□ -0.76
TMC1-203ENST00000469455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMC1-203ENST00000469455 CROCC2H7BZ55 1655 aa10.29□□□□□ -0.76
TMC1-203ENST00000469455 SOCS7O14512 581 aa10.29□□□□□ -0.76
TMC1-203ENST00000469455 QPCTQ16769 361 aa10.29□□□□□ -0.76
TMC1-203ENST00000469455 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
TMC1-203ENST00000469455 ZNF777Q9ULD5 760 aaPredicted RBP10.29□□□□□ -0.76
TMC1-203ENST00000469455 CAMSAP2Q08AD1 1489 aa10.29□□□□□ -0.76
TMC1-203ENST00000469455 ARHGAP5Q13017 1502 aa10.28□□□□□ -0.76
TMC1-203ENST00000469455 TSPOAP1O95153 1857 aa10.28□□□□□ -0.76
TMC1-203ENST00000469455 HDGFP51858 240 aaKnown RBP10.28□□□□□ -0.76
TMC1-203ENST00000469455 ERBB3P21860 1342 aa10.28□□□□□ -0.76
TMC1-203ENST00000469455 DNMT1P26358 1616 aaKnown RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 NUTM2DQ5VT03 806 aaPredicted RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 NUTM2AQ8IVF1 878 aaPredicted RBP10.27□□□□□ -0.77
TMC1-203ENST00000469455 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
TMC1-203ENST00000469455 ABCC1P33527 1531 aa10.27□□□□□ -0.77
TMC1-203ENST00000469455 ARHGEF5Q12774 1597 aa10.26□□□□□ -0.77
TMC1-203ENST00000469455 CD109Q6YHK3 1445 aa10.26□□□□□ -0.77
TMC1-203ENST00000469455 HOXA2O43364 376 aa10.26□□□□□ -0.77
TMC1-203ENST00000469455 SLC10A3P09131 477 aa10.26□□□□□ -0.77
TMC1-203ENST00000469455 RTL5Q5HYW3 569 aaPredicted RBP10.26□□□□□ -0.77
TMC1-203ENST00000469455 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
TMC1-203ENST00000469455 FANCAO15360 1455 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 PLEKHH2Q8IVE3 1493 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 AP1G2O75843 785 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 FDX1P10109 184 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 SLC4A3P48751 1232 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
TMC1-203ENST00000469455 POTEEQ6S8J3 1075 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 ZBTB3Q9H5J0 574 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 PRM3Q9NNZ6 103 aa10.25□□□□□ -0.77
TMC1-203ENST00000469455 CFDP1Q9UEE9 299 aaPredicted RBP10.25□□□□□ -0.77
TMC1-203ENST00000469455 NEO1Q92859 1461 aa10.24□□□□□ -0.77
TMC1-203ENST00000469455 SYCP2Q9BX26 1530 aa10.24□□□□□ -0.77
TMC1-203ENST00000469455 PBX2P40425 430 aa10.24□□□□□ -0.77
TMC1-203ENST00000469455 FAM98CQ17RN3 349 aaKnown RBP10.24□□□□□ -0.77
TMC1-203ENST00000469455 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
TMC1-203ENST00000469455 ADGBQ8N7X0 1667 aa10.24□□□□□ -0.77
TMC1-203ENST00000469455 CABLES1Q8TDN4 633 aa10.23□□□□□ -0.77
TMC1-203ENST00000469455 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
TMC1-203ENST00000469455 KIAA1107Q9UPP5 1409 aa10.23□□□□□ -0.77
TMC1-203ENST00000469455 MBD5Q9P267 1494 aa10.23□□□□□ -0.77
TMC1-203ENST00000469455 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 DMRTA1Q5VZB9 504 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 GDPD2Q9HCC8 539 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 SERPINA10Q9UK55 444 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 TEX14Q8IWB6 1497 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 SHANK2Q9UPX8 1470 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 ARHGEF12Q9NZN5 1544 aa10.22□□□□□ -0.77
TMC1-203ENST00000469455 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 EFCAB2Q5VUJ9 269 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 SLF2Q8IX21 1173 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
TMC1-203ENST00000469455 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
TMC1-203ENST00000469455 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.78
TMC1-203ENST00000469455 DAPK1P53355 1430 aa10.21□□□□□ -0.78
TMC1-203ENST00000469455 ADGRL1O94910 1474 aa10.21□□□□□ -0.78
TMC1-203ENST00000469455 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
TMC1-203ENST00000469455 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
TMC1-203ENST00000469455 USP17L8P0C7I0 530 aa10.2□□□□□ -0.78
TMC1-203ENST00000469455 GRIPAP1Q4V328 841 aa10.2□□□□□ -0.78
TMC1-203ENST00000469455 DIEXFQ68CQ4 756 aaKnown RBP10.2□□□□□ -0.78
TMC1-203ENST00000469455 AKNAQ7Z591 1439 aa10.2□□□□□ -0.78
TMC1-203ENST00000469455 LAPTM4BQ86VI4 370 aa10.2□□□□□ -0.78
TMC1-203ENST00000469455 GCC2Q8IWJ2 1684 aa10.2□□□□□ -0.78
TMC1-203ENST00000469455 KDM5CP41229 1560 aa10.19□□□□□ -0.78
TMC1-203ENST00000469455 ABCC5O15440 1437 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms