RNA–Protein interactions for RNA: ENST00000469366.1

MACF1-212, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-212ENST00000469366 ATRNO75882 1429 aa16.78■□□□□ 0.28
MACF1-212ENST00000469366 PAK3O75914 559 aaPredicted RBP16.77■□□□□ 0.28
MACF1-212ENST00000469366 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.27
MACF1-212ENST00000469366 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
MACF1-212ENST00000469366 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
MACF1-212ENST00000469366 EVC2Q86UK5 1308 aa16.75■□□□□ 0.27
MACF1-212ENST00000469366 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.74■□□□□ 0.27
MACF1-212ENST00000469366 RGS12O14924 1447 aa16.74■□□□□ 0.27
MACF1-212ENST00000469366 FAM83GA6ND36 823 aa16.74■□□□□ 0.27
MACF1-212ENST00000469366 HAP1P54257 671 aaPredicted RBP16.74■□□□□ 0.27
MACF1-212ENST00000469366 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
MACF1-212ENST00000469366 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
MACF1-212ENST00000469366 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
MACF1-212ENST00000469366 NUTM2GQ5VZR2 741 aa16.72■□□□□ 0.27
MACF1-212ENST00000469366 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
MACF1-212ENST00000469366 NWD2Q9ULI1 1742 aa16.7■□□□□ 0.26
MACF1-212ENST00000469366 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
MACF1-212ENST00000469366 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
MACF1-212ENST00000469366 EP400Q96L91 3159 aa16.69■□□□□ 0.26
MACF1-212ENST00000469366 GLI3P10071 1580 aa16.69■□□□□ 0.26
MACF1-212ENST00000469366 USP6P35125 1406 aa16.69■□□□□ 0.26
MACF1-212ENST00000469366 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
MACF1-212ENST00000469366 ABTB2Q8N961 1025 aa16.68■□□□□ 0.26
MACF1-212ENST00000469366 TESK2Q96S53 571 aa16.68■□□□□ 0.26
MACF1-212ENST00000469366 TIMELESSQ9UNS1 1208 aa16.68■□□□□ 0.26
MACF1-212ENST00000469366 COL14A1Q05707 1796 aaKnown RBP16.68■□□□□ 0.26
MACF1-212ENST00000469366 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
MACF1-212ENST00000469366 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
MACF1-212ENST00000469366 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
MACF1-212ENST00000469366 VPS72Q15906 364 aa16.67■□□□□ 0.26
MACF1-212ENST00000469366 UPF1Q92900 1129 aaKnown RBP eCLIP16.67■□□□□ 0.26
MACF1-212ENST00000469366 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
MACF1-212ENST00000469366 USP19O94966 1318 aa16.67■□□□□ 0.26
MACF1-212ENST00000469366 CPSF1Q10570 1443 aaKnown RBP16.66■□□□□ 0.26
MACF1-212ENST00000469366 BTG4Q9NY30 223 aa16.66■□□□□ 0.26
MACF1-212ENST00000469366 ATAD2Q6PL18 1390 aa16.65■□□□□ 0.26
MACF1-212ENST00000469366 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
MACF1-212ENST00000469366 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
MACF1-212ENST00000469366 ZC3H6P61129 1189 aaKnown RBP16.64■□□□□ 0.25
MACF1-212ENST00000469366 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
MACF1-212ENST00000469366 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 TTC21BQ7Z4L5 1316 aa16.63■□□□□ 0.25
MACF1-212ENST00000469366 ONECUT3O60422 494 aaPredicted RBP16.62■□□□□ 0.25
MACF1-212ENST00000469366 GCP02774 474 aa16.62■□□□□ 0.25
MACF1-212ENST00000469366 PUS7Q96PZ0 661 aaKnown RBP16.62■□□□□ 0.25
MACF1-212ENST00000469366 NLRP6P59044 892 aa16.61■□□□□ 0.25
MACF1-212ENST00000469366 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
MACF1-212ENST00000469366 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
MACF1-212ENST00000469366 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
MACF1-212ENST00000469366 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
MACF1-212ENST00000469366 CPDO75976 1380 aa16.6■□□□□ 0.25
MACF1-212ENST00000469366 KTN1Q86UP2 1357 aaKnown RBP16.6■□□□□ 0.25
MACF1-212ENST00000469366 USP47Q96K76 1375 aa16.6■□□□□ 0.25
MACF1-212ENST00000469366 SLIT3O75094 1523 aa16.6■□□□□ 0.25
MACF1-212ENST00000469366 CCDC9Q9Y3X0 531 aaKnown RBP16.59■□□□□ 0.25
MACF1-212ENST00000469366 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
MACF1-212ENST00000469366 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
MACF1-212ENST00000469366 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.24
MACF1-212ENST00000469366 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
MACF1-212ENST00000469366 SPATA31A5Q5VU36 1347 aa16.58■□□□□ 0.24
MACF1-212ENST00000469366 SPATA31A7Q8IWB4 1347 aa16.58■□□□□ 0.24
MACF1-212ENST00000469366 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
MACF1-212ENST00000469366 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
MACF1-212ENST00000469366 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
MACF1-212ENST00000469366 FAM98CQ17RN3 349 aaKnown RBP16.55■□□□□ 0.24
MACF1-212ENST00000469366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
MACF1-212ENST00000469366 COL18A1P39060 1754 aa16.54■□□□□ 0.24
MACF1-212ENST00000469366 SPATA31A1Q5TZJ5 1347 aa16.54■□□□□ 0.24
MACF1-212ENST00000469366 SLC24A1O60721 1099 aa16.54■□□□□ 0.24
MACF1-212ENST00000469366 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
MACF1-212ENST00000469366 USP31Q70CQ4 1352 aa16.53■□□□□ 0.24
MACF1-212ENST00000469366 HDGFL2Q7Z4V5 671 aaPredicted RBP16.53■□□□□ 0.24
MACF1-212ENST00000469366 NME9Q86XW9 330 aa16.53■□□□□ 0.24
MACF1-212ENST00000469366 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
MACF1-212ENST00000469366 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
MACF1-212ENST00000469366 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
MACF1-212ENST00000469366 TMF1P82094 1093 aa16.52■□□□□ 0.24
MACF1-212ENST00000469366 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.24
MACF1-212ENST00000469366 ARHGEF25Q86VW2 580 aa16.52■□□□□ 0.24
MACF1-212ENST00000469366 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
MACF1-212ENST00000469366 EDC4Q6P2E9 1401 aaKnown RBP16.52■□□□□ 0.23
MACF1-212ENST00000469366 NFAT5O94916 1531 aa16.51■□□□□ 0.23
MACF1-212ENST00000469366 AXIN2Q9Y2T1 843 aa16.51■□□□□ 0.23
MACF1-212ENST00000469366 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
MACF1-212ENST00000469366 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
MACF1-212ENST00000469366 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
MACF1-212ENST00000469366 EVA1CP58658 441 aa16.5■□□□□ 0.23
MACF1-212ENST00000469366 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
MACF1-212ENST00000469366 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
MACF1-212ENST00000469366 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
MACF1-212ENST00000469366 SOX12O15370 315 aa16.49■□□□□ 0.23
MACF1-212ENST00000469366 A0A0G2JS52 829 aa16.47■□□□□ 0.23
MACF1-212ENST00000469366 MYT1Q01538 1121 aa16.47■□□□□ 0.23
MACF1-212ENST00000469366 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
MACF1-212ENST00000469366 OVOS2A0A0J9YW53 1432 aa16.46■□□□□ 0.23
MACF1-212ENST00000469366 OVOS2Q6IE36 1432 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms