RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
TGFBR3-205ENST00000468996 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
TGFBR3-205ENST00000468996 PRDM11Q9NQV5 511 aa15.23■□□□□ 0.03
TGFBR3-205ENST00000468996 ATP7BP35670 1465 aa15.22■□□□□ 0.03
TGFBR3-205ENST00000468996 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
TGFBR3-205ENST00000468996 CABP1Q9NZU7 370 aa15.21■□□□□ 0.03
TGFBR3-205ENST00000468996 KIAA1210Q9ULL0 1709 aa15.2■□□□□ 0.02
TGFBR3-205ENST00000468996 CHRNA2Q15822 529 aa15.2■□□□□ 0.02
TGFBR3-205ENST00000468996 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-205ENST00000468996 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-205ENST00000468996 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-205ENST00000468996 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-205ENST00000468996 CCDC125Q86Z20 511 aa15.19■□□□□ 0.02
TGFBR3-205ENST00000468996 TRPM3Q9HCF6 1732 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-205ENST00000468996 EVA1CP58658 441 aa15.18■□□□□ 0.02
TGFBR3-205ENST00000468996 STRN4Q9NRL3 753 aa15.18■□□□□ 0.02
TGFBR3-205ENST00000468996 POLR3AO14802 1390 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-205ENST00000468996 EVC2Q86UK5 1308 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 PPIP5K1Q6PFW1 1433 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 GLI3P10071 1580 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 KRT27Q7Z3Y8 459 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 NLRP13Q86W25 1043 aa15.17■□□□□ 0.02
TGFBR3-205ENST00000468996 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
TGFBR3-205ENST00000468996 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
TGFBR3-205ENST00000468996 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
TGFBR3-205ENST00000468996 USP35Q9P2H5 1018 aa15.15■□□□□ 0.02
TGFBR3-205ENST00000468996 ALS2Q96Q42 1657 aa15.15■□□□□ 0.02
TGFBR3-205ENST00000468996 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
TGFBR3-205ENST00000468996 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.14■□□□□ 0.01
TGFBR3-205ENST00000468996 NLRP6P59044 892 aa15.14■□□□□ 0.01
TGFBR3-205ENST00000468996 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
TGFBR3-205ENST00000468996 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
TGFBR3-205ENST00000468996 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
TGFBR3-205ENST00000468996 PLCH1Q4KWH8 1693 aa15.13■□□□□ 0.01
TGFBR3-205ENST00000468996 GCP02774 474 aa15.13■□□□□ 0.01
TGFBR3-205ENST00000468996 ABCA3Q99758 1704 aa15.13■□□□□ 0.01
TGFBR3-205ENST00000468996 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
TGFBR3-205ENST00000468996 FAM182BQ5T319 152 aa15.12■□□□□ 0.01
TGFBR3-205ENST00000468996 EP400Q96L91 3159 aa15.12■□□□□ 0.01
TGFBR3-205ENST00000468996 NWD2Q9ULI1 1742 aa15.12■□□□□ 0.01
TGFBR3-205ENST00000468996 COL14A1Q05707 1796 aaKnown RBP15.11■□□□□ 0.01
TGFBR3-205ENST00000468996 DEFB132Q7Z7B7 95 aa15.11■□□□□ 0.01
TGFBR3-205ENST00000468996 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
TGFBR3-205ENST00000468996 SPATA31A1Q5TZJ5 1347 aa15.1■□□□□ 0.01
TGFBR3-205ENST00000468996 TRPM1Q7Z4N2 1603 aa15.1■□□□□ 0.01
TGFBR3-205ENST00000468996 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
TGFBR3-205ENST00000468996 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
TGFBR3-205ENST00000468996 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
TGFBR3-205ENST00000468996 SOX12O15370 315 aa15.08■□□□□ 0
TGFBR3-205ENST00000468996 TMC1Q8TDI8 760 aa15.08■□□□□ 0
TGFBR3-205ENST00000468996 TOPAZ1Q8N9V7 1692 aa15.08■□□□□ 0
TGFBR3-205ENST00000468996 USP19O94966 1318 aa15.08■□□□□ 0
TGFBR3-205ENST00000468996 USP6P35125 1406 aa15.08■□□□□ 0
TGFBR3-205ENST00000468996 BRWD3Q6RI45 1802 aa15.07■□□□□ 0
TGFBR3-205ENST00000468996 BRD4O60885 1362 aaPredicted RBP15.07■□□□□ 0
TGFBR3-205ENST00000468996 TTC21BQ7Z4L5 1316 aa15.06■□□□□ 0
TGFBR3-205ENST00000468996 PDE3BQ13370 1112 aa15.05■□□□□ -0
TGFBR3-205ENST00000468996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
TGFBR3-205ENST00000468996 TCP11L2Q8N4U5 519 aa15.05■□□□□ -0
TGFBR3-205ENST00000468996 CPDO75976 1380 aa15.05■□□□□ -0
TGFBR3-205ENST00000468996 NRAPQ86VF7 1730 aa15.05■□□□□ -0
TGFBR3-205ENST00000468996 CRYBG1Q9Y4K1 1723 aa15.04■□□□□ -0
TGFBR3-205ENST00000468996 BAG6P46379 1132 aa15.04■□□□□ -0
TGFBR3-205ENST00000468996 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
TGFBR3-205ENST00000468996 SSH2Q76I76 1423 aa15.03■□□□□ -0
TGFBR3-205ENST00000468996 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
TGFBR3-205ENST00000468996 BARGINQ6ZT62 677 aa15.03■□□□□ -0
TGFBR3-205ENST00000468996 SLC12A5Q9H2X9 1139 aa15.03■□□□□ -0
TGFBR3-205ENST00000468996 PHRF1Q9P1Y6 1649 aaKnown RBP15.03■□□□□ -0
TGFBR3-205ENST00000468996 TRIM37O94972 964 aa15.02■□□□□ -0
TGFBR3-205ENST00000468996 EN1Q05925 392 aaPredicted RBP15.02■□□□□ -0
TGFBR3-205ENST00000468996 FAM196AQ6ZSG2 479 aa15.02■□□□□ -0
TGFBR3-205ENST00000468996 KCNH5Q8NCM2 988 aa15.02■□□□□ -0
TGFBR3-205ENST00000468996 PCGF6Q9BYE7 350 aa15.02■□□□□ -0
TGFBR3-205ENST00000468996 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
TGFBR3-205ENST00000468996 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
TGFBR3-205ENST00000468996 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
TGFBR3-205ENST00000468996 AXIN2Q9Y2T1 843 aa15.01□□□□□ -0.01
TGFBR3-205ENST00000468996 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
TGFBR3-205ENST00000468996 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
TGFBR3-205ENST00000468996 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
TGFBR3-205ENST00000468996 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
TGFBR3-205ENST00000468996 CSB-PGBD3P0DP91 1061 aa14.99□□□□□ -0.01
TGFBR3-205ENST00000468996 ARHGEF25Q86VW2 580 aa14.99□□□□□ -0.01
TGFBR3-205ENST00000468996 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
TGFBR3-205ENST00000468996 CPSF1Q10570 1443 aaKnown RBP14.99□□□□□ -0.01
TGFBR3-205ENST00000468996 SBNO2Q9Y2G9 1366 aa14.98□□□□□ -0.01
TGFBR3-205ENST00000468996 APBA3O96018 575 aa14.98□□□□□ -0.01
TGFBR3-205ENST00000468996 NME9Q86XW9 330 aa14.98□□□□□ -0.01
TGFBR3-205ENST00000468996 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
TGFBR3-205ENST00000468996 PSDA5PKW4 1024 aaPredicted RBP14.97□□□□□ -0.01
TGFBR3-205ENST00000468996 COL5A2P05997 1499 aaPredicted RBP14.96□□□□□ -0.01
TGFBR3-205ENST00000468996 CRB1P82279 1406 aa14.96□□□□□ -0.01
TGFBR3-205ENST00000468996 EZH2Q15910 746 aaKnown RBP14.96□□□□□ -0.01
TGFBR3-205ENST00000468996 TESK2Q96S53 571 aa14.96□□□□□ -0.01
TGFBR3-205ENST00000468996 SLC24A1O60721 1099 aa14.95□□□□□ -0.02
TGFBR3-205ENST00000468996 PUS7Q96PZ0 661 aaKnown RBP14.95□□□□□ -0.02
TGFBR3-205ENST00000468996 THSD7AQ9UPZ6 1657 aa14.95□□□□□ -0.02
TGFBR3-205ENST00000468996 WDR17Q8IZU2 1322 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms