RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
SDCCAG3-209ENST00000468963 SIN3AQ96ST3 1273 aa21.39■■□□□ 1.01
SDCCAG3-209ENST00000468963 BTG4Q9NY30 223 aa21.39■■□□□ 1.01
SDCCAG3-209ENST00000468963 POLR3AO14802 1390 aaPredicted RBP21.37■■□□□ 1.01
SDCCAG3-209ENST00000468963 ACEP12821 1306 aa21.37■■□□□ 1.01
SDCCAG3-209ENST00000468963 CCDC9Q9Y3X0 531 aaKnown RBP21.37■■□□□ 1.01
SDCCAG3-209ENST00000468963 PLCH1Q4KWH8 1693 aa21.37■■□□□ 1.01
SDCCAG3-209ENST00000468963 SRCAPQ6ZRS2 3230 aa21.35■■□□□ 1.01
SDCCAG3-209ENST00000468963 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
SDCCAG3-209ENST00000468963 ITSN1Q15811 1721 aa21.34■■□□□ 1.01
SDCCAG3-209ENST00000468963 BRWD3Q6RI45 1802 aa21.33■■□□□ 1.01
SDCCAG3-209ENST00000468963 KRT27Q7Z3Y8 459 aa21.32■■□□□ 1
SDCCAG3-209ENST00000468963 CABP2Q9NPB3 220 aa21.32■■□□□ 1
SDCCAG3-209ENST00000468963 PRDM11Q9NQV5 511 aa21.32■■□□□ 1
SDCCAG3-209ENST00000468963 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
SDCCAG3-209ENST00000468963 SRPK2P78362 688 aaKnown RBP21.31■■□□□ 1
SDCCAG3-209ENST00000468963 NEUROD1Q13562 356 aa21.31■■□□□ 1
SDCCAG3-209ENST00000468963 NUTM2GQ5VZR2 741 aa21.31■■□□□ 1
SDCCAG3-209ENST00000468963 CRYBG1Q9Y4K1 1723 aa21.31■■□□□ 1
SDCCAG3-209ENST00000468963 SPATA31A5Q5VU36 1347 aa21.3■■□□□ 1
SDCCAG3-209ENST00000468963 SPATA31A7Q8IWB4 1347 aa21.3■■□□□ 1
SDCCAG3-209ENST00000468963 NRAPQ86VF7 1730 aa21.3■■□□□ 1
SDCCAG3-209ENST00000468963 FAM98CQ17RN3 349 aaKnown RBP21.3■■□□□ 1
SDCCAG3-209ENST00000468963 BLMP54132 1417 aaPredicted RBP21.29■■□□□ 1
SDCCAG3-209ENST00000468963 TOPAZ1Q8N9V7 1692 aa21.29■■□□□ 1
SDCCAG3-209ENST00000468963 KIAA0232Q92628 1395 aa21.29■■□□□ 1
SDCCAG3-209ENST00000468963 ZC3H6P61129 1189 aaKnown RBP21.28■■□□□ 1
SDCCAG3-209ENST00000468963 CHRNA2Q15822 529 aa21.28■■□□□ 1
SDCCAG3-209ENST00000468963 ABTB2Q8N961 1025 aa21.28■■□□□ 1
SDCCAG3-209ENST00000468963 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
SDCCAG3-209ENST00000468963 DEFB132Q7Z7B7 95 aa21.26■□□□□ 0.99
SDCCAG3-209ENST00000468963 CABP1Q9NZU7 370 aa21.26■□□□□ 0.99
SDCCAG3-209ENST00000468963 PPIP5K1Q6PFW1 1433 aa21.26■□□□□ 0.99
SDCCAG3-209ENST00000468963 A0A0G2JS52 829 aa21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 MYT1Q01538 1121 aa21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 USP19O94966 1318 aa21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 SPATA31A1Q5TZJ5 1347 aa21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 BRD4O60885 1362 aaPredicted RBP21.23■□□□□ 0.99
SDCCAG3-209ENST00000468963 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
SDCCAG3-209ENST00000468963 GCP02774 474 aa21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 SF3B2Q13435 895 aaKnown RBP21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 STRN4Q9NRL3 753 aa21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 PHRF1Q9P1Y6 1649 aaKnown RBP21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 QRICH2Q9H0J4 1663 aa21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 CPDO75976 1380 aa21.21■□□□□ 0.99
SDCCAG3-209ENST00000468963 ROCK2O75116 1388 aaKnown RBP21.2■□□□□ 0.98
SDCCAG3-209ENST00000468963 EVA1CP58658 441 aa21.19■□□□□ 0.98
SDCCAG3-209ENST00000468963 FAM182BQ5T319 152 aa21.18■□□□□ 0.98
SDCCAG3-209ENST00000468963 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
SDCCAG3-209ENST00000468963 USP6P35125 1406 aa21.17■□□□□ 0.98
SDCCAG3-209ENST00000468963 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
SDCCAG3-209ENST00000468963 NLRP6P59044 892 aa21.16■□□□□ 0.98
SDCCAG3-209ENST00000468963 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
SDCCAG3-209ENST00000468963 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
SDCCAG3-209ENST00000468963 BARGINQ6ZT62 677 aa21.15■□□□□ 0.98
SDCCAG3-209ENST00000468963 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
SDCCAG3-209ENST00000468963 NRKQ7Z2Y5 1582 aa21.14■□□□□ 0.98
SDCCAG3-209ENST00000468963 BAG6P46379 1132 aa21.13■□□□□ 0.97
SDCCAG3-209ENST00000468963 USP35Q9P2H5 1018 aa21.13■□□□□ 0.97
SDCCAG3-209ENST00000468963 TTC21BQ7Z4L5 1316 aa21.11■□□□□ 0.97
SDCCAG3-209ENST00000468963 TCP11L2Q8N4U5 519 aa21.11■□□□□ 0.97
SDCCAG3-209ENST00000468963 LMO7Q8WWI1 1683 aa21.11■□□□□ 0.97
SDCCAG3-209ENST00000468963 FAM196AQ6ZSG2 479 aa21.1■□□□□ 0.97
SDCCAG3-209ENST00000468963 EN1Q05925 392 aaPredicted RBP21.09■□□□□ 0.97
SDCCAG3-209ENST00000468963 CARD11Q9BXL7 1154 aa21.09■□□□□ 0.97
SDCCAG3-209ENST00000468963 THRAP3Q9Y2W1 955 aaKnown RBP21.09■□□□□ 0.97
SDCCAG3-209ENST00000468963 AATKQ6ZMQ8 1374 aa21.09■□□□□ 0.97
SDCCAG3-209ENST00000468963 CPSF1Q10570 1443 aaKnown RBP21.08■□□□□ 0.97
SDCCAG3-209ENST00000468963 SLIT3O75094 1523 aa21.08■□□□□ 0.96
SDCCAG3-209ENST00000468963 SBNO2Q9Y2G9 1366 aa21.08■□□□□ 0.96
SDCCAG3-209ENST00000468963 COL5A2P05997 1499 aaPredicted RBP21.07■□□□□ 0.96
SDCCAG3-209ENST00000468963 TRIM37O94972 964 aa21.06■□□□□ 0.96
SDCCAG3-209ENST00000468963 PDE3BQ13370 1112 aa21.06■□□□□ 0.96
SDCCAG3-209ENST00000468963 AXIN2Q9Y2T1 843 aa21.06■□□□□ 0.96
SDCCAG3-209ENST00000468963 TTC21AQ8NDW8 1320 aa21.05■□□□□ 0.96
SDCCAG3-209ENST00000468963 ZBTB7CA1YPR0 619 aa21.05■□□□□ 0.96
SDCCAG3-209ENST00000468963 ARHGEF25Q86VW2 580 aa21.05■□□□□ 0.96
SDCCAG3-209ENST00000468963 DISP2A7MBM2 1401 aa21.04■□□□□ 0.96
SDCCAG3-209ENST00000468963 PIK3C2AO00443 1686 aa21.04■□□□□ 0.96
SDCCAG3-209ENST00000468963 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
SDCCAG3-209ENST00000468963 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
SDCCAG3-209ENST00000468963 CAMKK2Q96RR4 588 aa21.03■□□□□ 0.96
SDCCAG3-209ENST00000468963 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
SDCCAG3-209ENST00000468963 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 TRIM26Q12899 539 aaPredicted RBP21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 EZH2Q15910 746 aaKnown RBP21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 COL18A1P39060 1754 aa21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 AKAP12Q02952 1782 aa21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 CRB1P82279 1406 aa21.02■□□□□ 0.96
SDCCAG3-209ENST00000468963 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
SDCCAG3-209ENST00000468963 APBA3O96018 575 aa21■□□□□ 0.95
SDCCAG3-209ENST00000468963 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
SDCCAG3-209ENST00000468963 SLC12A5Q9H2X9 1139 aa21■□□□□ 0.95
SDCCAG3-209ENST00000468963 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
SDCCAG3-209ENST00000468963 TNS1Q9HBL0 1735 aaKnown RBP20.98■□□□□ 0.95
SDCCAG3-209ENST00000468963 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
SDCCAG3-209ENST00000468963 WDR17Q8IZU2 1322 aa20.98■□□□□ 0.95
SDCCAG3-209ENST00000468963 USP31Q70CQ4 1352 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms