RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 PDGFDQ9GZP0 370 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF39-202ENST00000468876 STK26Q9P289 416 aa17.54■□□□□ 0.4
ARHGEF39-202ENST00000468876 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
ARHGEF39-202ENST00000468876 PTGER2P43116 358 aa17.53■□□□□ 0.4
ARHGEF39-202ENST00000468876 PPLO60437 1756 aa17.53■□□□□ 0.4
ARHGEF39-202ENST00000468876 CAPN15O75808 1086 aa17.52■□□□□ 0.4
ARHGEF39-202ENST00000468876 ANO8Q9HCE9 1232 aaPredicted RBP17.52■□□□□ 0.4
ARHGEF39-202ENST00000468876 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
ARHGEF39-202ENST00000468876 COL14A1Q05707 1796 aaKnown RBP17.51■□□□□ 0.39
ARHGEF39-202ENST00000468876 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
ARHGEF39-202ENST00000468876 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
ARHGEF39-202ENST00000468876 UTRNP46939 3433 aa17.51■□□□□ 0.39
ARHGEF39-202ENST00000468876 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF39-202ENST00000468876 STRN4Q9NRL3 753 aa17.5■□□□□ 0.39
ARHGEF39-202ENST00000468876 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
ARHGEF39-202ENST00000468876 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
ARHGEF39-202ENST00000468876 PELP1Q8IZL8 1130 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-202ENST00000468876 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
ARHGEF39-202ENST00000468876 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
ARHGEF39-202ENST00000468876 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
ARHGEF39-202ENST00000468876 HSPA6P17066 643 aa17.46■□□□□ 0.39
ARHGEF39-202ENST00000468876 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
ARHGEF39-202ENST00000468876 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
ARHGEF39-202ENST00000468876 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
ARHGEF39-202ENST00000468876 ARXQ96QS3 562 aa17.43■□□□□ 0.38
ARHGEF39-202ENST00000468876 TECPR2O15040 1411 aa17.43■□□□□ 0.38
ARHGEF39-202ENST00000468876 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
ARHGEF39-202ENST00000468876 MTFR1LQ9H019 292 aa17.42■□□□□ 0.38
ARHGEF39-202ENST00000468876 STK32BQ9NY57 414 aa17.42■□□□□ 0.38
ARHGEF39-202ENST00000468876 EVA1CP58658 441 aa17.41■□□□□ 0.38
ARHGEF39-202ENST00000468876 CHRNA2Q15822 529 aa17.41■□□□□ 0.38
ARHGEF39-202ENST00000468876 KLHL34Q8N239 644 aa17.41■□□□□ 0.38
ARHGEF39-202ENST00000468876 PLSCR1O15162 318 aa17.4■□□□□ 0.38
ARHGEF39-202ENST00000468876 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
ARHGEF39-202ENST00000468876 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
ARHGEF39-202ENST00000468876 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
ARHGEF39-202ENST00000468876 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
ARHGEF39-202ENST00000468876 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
ARHGEF39-202ENST00000468876 ADGRF5Q8IZF2 1346 aa17.38■□□□□ 0.37
ARHGEF39-202ENST00000468876 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
ARHGEF39-202ENST00000468876 RGPD8O14715 1765 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 TMEM132EQ6IEE7 984 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 SGIP1Q9BQI5 828 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 GPBP1L1Q9HC44 474 aaPredicted RBP17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 PIK3C2GO75747 1445 aa17.36■□□□□ 0.37
ARHGEF39-202ENST00000468876 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
ARHGEF39-202ENST00000468876 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
ARHGEF39-202ENST00000468876 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
ARHGEF39-202ENST00000468876 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
ARHGEF39-202ENST00000468876 KNDC1Q76NI1 1749 aa17.34■□□□□ 0.37
ARHGEF39-202ENST00000468876 ABCC11Q96J66 1382 aa17.34■□□□□ 0.37
ARHGEF39-202ENST00000468876 ATP10DQ9P241 1426 aa17.33■□□□□ 0.36
ARHGEF39-202ENST00000468876 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.36
ARHGEF39-202ENST00000468876 OVOS2A0A0G2JMS6 1433 aa17.32■□□□□ 0.36
ARHGEF39-202ENST00000468876 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
ARHGEF39-202ENST00000468876 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
ARHGEF39-202ENST00000468876 LARP1Q6PKG0 1096 aaKnown RBP17.32■□□□□ 0.36
ARHGEF39-202ENST00000468876 PROM2Q8N271 834 aa17.32■□□□□ 0.36
ARHGEF39-202ENST00000468876 SSH2Q76I76 1423 aa17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
ARHGEF39-202ENST00000468876 PRELPP51888 382 aa17.3■□□□□ 0.36
ARHGEF39-202ENST00000468876 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF39-202ENST00000468876 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
ARHGEF39-202ENST00000468876 TNS4Q8IZW8 715 aa17.3■□□□□ 0.36
ARHGEF39-202ENST00000468876 TXNRD1Q16881 649 aa17.29■□□□□ 0.36
ARHGEF39-202ENST00000468876 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
ARHGEF39-202ENST00000468876 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
ARHGEF39-202ENST00000468876 SLC34A2O95436 690 aa17.28■□□□□ 0.36
ARHGEF39-202ENST00000468876 ALS2Q96Q42 1657 aa17.28■□□□□ 0.36
ARHGEF39-202ENST00000468876 GRIN3BO60391 1043 aa17.27■□□□□ 0.36
ARHGEF39-202ENST00000468876 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
ARHGEF39-202ENST00000468876 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
ARHGEF39-202ENST00000468876 APLP1P51693 650 aa17.25■□□□□ 0.35
ARHGEF39-202ENST00000468876 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
ARHGEF39-202ENST00000468876 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
ARHGEF39-202ENST00000468876 POLD1P28340 1107 aa17.23■□□□□ 0.35
ARHGEF39-202ENST00000468876 NUTM2GQ5VZR2 741 aa17.23■□□□□ 0.35
ARHGEF39-202ENST00000468876 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
ARHGEF39-202ENST00000468876 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
ARHGEF39-202ENST00000468876 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
ARHGEF39-202ENST00000468876 DDB1Q16531 1140 aa17.22■□□□□ 0.35
ARHGEF39-202ENST00000468876 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
ARHGEF39-202ENST00000468876 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
ARHGEF39-202ENST00000468876 ADGRB1O14514 1584 aa17.22■□□□□ 0.35
ARHGEF39-202ENST00000468876 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
ARHGEF39-202ENST00000468876 POGKQ9P215 609 aa17.2■□□□□ 0.34
ARHGEF39-202ENST00000468876 PEAK1Q9H792 1746 aa17.2■□□□□ 0.34
ARHGEF39-202ENST00000468876 PARP4Q9UKK3 1724 aaKnown RBP17.2■□□□□ 0.34
ARHGEF39-202ENST00000468876 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
ARHGEF39-202ENST00000468876 ATP7BP35670 1465 aa17.18■□□□□ 0.34
ARHGEF39-202ENST00000468876 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
ARHGEF39-202ENST00000468876 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
ARHGEF39-202ENST00000468876 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms