RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 FYB1O15117 783 aa23.84■■□□□ 1.41
RPL39-202ENST00000468844 RALBP1Q15311 655 aa23.84■■□□□ 1.41
RPL39-202ENST00000468844 USP54Q70EL1 1684 aa23.83■■□□□ 1.41
RPL39-202ENST00000468844 FOXO3O43524 673 aa23.83■■□□□ 1.41
RPL39-202ENST00000468844 MAP2P11137 1827 aaKnown RBP23.83■■□□□ 1.41
RPL39-202ENST00000468844 TTC21BQ7Z4L5 1316 aa23.83■■□□□ 1.41
RPL39-202ENST00000468844 NHSL1Q5SYE7 1610 aa23.82■■□□□ 1.4
RPL39-202ENST00000468844 ROBO1Q9Y6N7 1651 aa23.82■■□□□ 1.4
RPL39-202ENST00000468844 GGNBP2Q9H3C7 697 aa23.82■■□□□ 1.4
RPL39-202ENST00000468844 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
RPL39-202ENST00000468844 NME9Q86XW9 330 aa23.8■■□□□ 1.4
RPL39-202ENST00000468844 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
RPL39-202ENST00000468844 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
RPL39-202ENST00000468844 PSME1Q06323 249 aa23.78■■□□□ 1.4
RPL39-202ENST00000468844 BRD4O60885 1362 aaPredicted RBP23.78■■□□□ 1.4
RPL39-202ENST00000468844 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
RPL39-202ENST00000468844 IQSEC2Q5JU85 1478 aa23.77■■□□□ 1.4
RPL39-202ENST00000468844 PXDNQ92626 1479 aa23.77■■□□□ 1.4
RPL39-202ENST00000468844 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
RPL39-202ENST00000468844 DDX17Q92841 729 aaKnown RBP23.76■■□□□ 1.39
RPL39-202ENST00000468844 OVOS2A0A0J9YW53 1432 aa23.76■■□□□ 1.39
RPL39-202ENST00000468844 OVOS2Q6IE36 1432 aa23.76■■□□□ 1.39
RPL39-202ENST00000468844 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
RPL39-202ENST00000468844 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
RPL39-202ENST00000468844 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
RPL39-202ENST00000468844 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
RPL39-202ENST00000468844 PAK3O75914 559 aaPredicted RBP23.74■■□□□ 1.39
RPL39-202ENST00000468844 CCDC184Q52MB2 194 aa23.73■■□□□ 1.39
RPL39-202ENST00000468844 KRT28Q7Z3Y7 464 aa23.73■■□□□ 1.39
RPL39-202ENST00000468844 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
RPL39-202ENST00000468844 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
RPL39-202ENST00000468844 USP31Q70CQ4 1352 aa23.71■■□□□ 1.39
RPL39-202ENST00000468844 COG3Q96JB2 828 aa23.71■■□□□ 1.39
RPL39-202ENST00000468844 NLRP13Q86W25 1043 aa23.7■■□□□ 1.38
RPL39-202ENST00000468844 ABTB2Q8N961 1025 aa23.7■■□□□ 1.38
RPL39-202ENST00000468844 CRYBG1Q9Y4K1 1723 aa23.68■■□□□ 1.38
RPL39-202ENST00000468844 LTN1O94822 1766 aa23.68■■□□□ 1.38
RPL39-202ENST00000468844 AHDC1Q5TGY3 1603 aaPredicted RBP23.68■■□□□ 1.38
RPL39-202ENST00000468844 CERKQ8TCT0 537 aa23.68■■□□□ 1.38
RPL39-202ENST00000468844 SBNO1A3KN83 1393 aa23.67■■□□□ 1.38
RPL39-202ENST00000468844 TOM1O60784 492 aa23.67■■□□□ 1.38
RPL39-202ENST00000468844 NLRP6P59044 892 aa23.67■■□□□ 1.38
RPL39-202ENST00000468844 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
RPL39-202ENST00000468844 SOS2Q07890 1332 aaPredicted RBP23.66■■□□□ 1.38
RPL39-202ENST00000468844 SCAF1Q9H7N4 1312 aaKnown RBP23.66■■□□□ 1.38
RPL39-202ENST00000468844 TNS3Q68CZ2 1445 aa23.66■■□□□ 1.38
RPL39-202ENST00000468844 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
RPL39-202ENST00000468844 PHLPP1O60346 1717 aa23.65■■□□□ 1.38
RPL39-202ENST00000468844 FBLN1P23142 703 aa23.65■■□□□ 1.38
RPL39-202ENST00000468844 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
RPL39-202ENST00000468844 AATKQ6ZMQ8 1374 aa23.63■■□□□ 1.37
RPL39-202ENST00000468844 MED1Q15648 1581 aaPredicted RBP23.62■■□□□ 1.37
RPL39-202ENST00000468844 SLIT3O75094 1523 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 SHPRHQ149N8 1683 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 SPATA31A3Q5VYP0 1347 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 UBAP1LF5GYI3 381 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 ABCA3Q99758 1704 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
RPL39-202ENST00000468844 LMOD2Q6P5Q4 547 aa23.61■■□□□ 1.37
RPL39-202ENST00000468844 NFAT5O94916 1531 aa23.61■■□□□ 1.37
RPL39-202ENST00000468844 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
RPL39-202ENST00000468844 COL16A1Q07092 1604 aaPredicted RBP23.6■■□□□ 1.37
RPL39-202ENST00000468844 MTHFSP49914 203 aa23.6■■□□□ 1.37
RPL39-202ENST00000468844 PIP4K2BP78356 416 aa23.59■■□□□ 1.37
RPL39-202ENST00000468844 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
RPL39-202ENST00000468844 SOX12O15370 315 aa23.58■■□□□ 1.37
RPL39-202ENST00000468844 USP19O94966 1318 aa23.58■■□□□ 1.36
RPL39-202ENST00000468844 RRS1Q15050 365 aaKnown RBP23.57■■□□□ 1.36
RPL39-202ENST00000468844 ARHGEF10O15013 1369 aa23.57■■□□□ 1.36
RPL39-202ENST00000468844 EMILIN1Q9Y6C2 1016 aa23.57■■□□□ 1.36
RPL39-202ENST00000468844 COL3A1P02461 1466 aaPredicted RBP23.56■■□□□ 1.36
RPL39-202ENST00000468844 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
RPL39-202ENST00000468844 RGPD5Q99666 1765 aa23.54■■□□□ 1.36
RPL39-202ENST00000468844 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
RPL39-202ENST00000468844 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
RPL39-202ENST00000468844 COL22A1Q8NFW1 1626 aaPredicted RBP23.53■■□□□ 1.36
RPL39-202ENST00000468844 PLEKHG5O94827 1062 aa23.52■■□□□ 1.36
RPL39-202ENST00000468844 PPM1GO15355 546 aaPredicted RBP23.51■■□□□ 1.35
RPL39-202ENST00000468844 GCP02774 474 aa23.51■■□□□ 1.35
RPL39-202ENST00000468844 KCNH5Q8NCM2 988 aa23.51■■□□□ 1.35
RPL39-202ENST00000468844 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
RPL39-202ENST00000468844 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
RPL39-202ENST00000468844 INSRP06213 1382 aa23.5■■□□□ 1.35
RPL39-202ENST00000468844 CABLES1Q8TDN4 633 aa23.49■■□□□ 1.35
RPL39-202ENST00000468844 LRRC59Q96AG4 307 aaKnown RBP23.49■■□□□ 1.35
RPL39-202ENST00000468844 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
RPL39-202ENST00000468844 COL18A1P39060 1754 aa23.47■■□□□ 1.35
RPL39-202ENST00000468844 FLT4P35916 1363 aa23.47■■□□□ 1.35
RPL39-202ENST00000468844 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
RPL39-202ENST00000468844 RGPD2P0DJD1 1756 aa23.44■■□□□ 1.34
RPL39-202ENST00000468844 RGPD1P0DJD0 1748 aa23.44■■□□□ 1.34
RPL39-202ENST00000468844 RTL1A6NKG5 1358 aa23.44■■□□□ 1.34
RPL39-202ENST00000468844 HSP90AB2PQ58FF8 381 aa23.43■■□□□ 1.34
RPL39-202ENST00000468844 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
RPL39-202ENST00000468844 AMPHP49418 695 aa23.42■■□□□ 1.34
RPL39-202ENST00000468844 DIAPH1O60610 1272 aaKnown RBP23.41■■□□□ 1.34
RPL39-202ENST00000468844 HOXC9P31274 260 aa23.41■■□□□ 1.34
RPL39-202ENST00000468844 ZC3H6P61129 1189 aaKnown RBP23.41■■□□□ 1.34
RPL39-202ENST00000468844 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
RPL39-202ENST00000468844 YTHDC1Q96MU7 727 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms