RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 PSME1Q06323 249 aa15.54■□□□□ 0.08
MSH5-214ENST00000468602 NGDNQ8NEJ9 315 aaKnown RBP15.54■□□□□ 0.08
MSH5-214ENST00000468602 TMC1Q8TDI8 760 aa15.54■□□□□ 0.08
MSH5-214ENST00000468602 PANK3Q9H999 370 aa15.54■□□□□ 0.08
MSH5-214ENST00000468602 ALS2Q96Q42 1657 aa15.54■□□□□ 0.08
MSH5-214ENST00000468602 FOXO3O43524 673 aa15.53■□□□□ 0.08
MSH5-214ENST00000468602 PMFBP1Q8TBY8 1022 aa15.53■□□□□ 0.08
MSH5-214ENST00000468602 HSPA1LP34931 641 aa15.52■□□□□ 0.08
MSH5-214ENST00000468602 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.08
MSH5-214ENST00000468602 SPATA31A3Q5VYP0 1347 aa15.51■□□□□ 0.07
MSH5-214ENST00000468602 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
MSH5-214ENST00000468602 KRT28Q7Z3Y7 464 aa15.51■□□□□ 0.07
MSH5-214ENST00000468602 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
MSH5-214ENST00000468602 TNS3Q68CZ2 1445 aa15.5■□□□□ 0.07
MSH5-214ENST00000468602 NSD3Q9BZ95 1437 aa15.5■□□□□ 0.07
MSH5-214ENST00000468602 ARHGEF10O15013 1369 aa15.49■□□□□ 0.07
MSH5-214ENST00000468602 CGNL1Q0VF96 1302 aa15.49■□□□□ 0.07
MSH5-214ENST00000468602 LRRC59Q96AG4 307 aaKnown RBP15.49■□□□□ 0.07
MSH5-214ENST00000468602 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
MSH5-214ENST00000468602 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
MSH5-214ENST00000468602 FYB1O15117 783 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 KNSTRNQ9Y448 316 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 OVOS2A0A0J9YW53 1432 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 OVOS2Q6IE36 1432 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
MSH5-214ENST00000468602 ANKRD26Q9UPS8 1709 aa15.47■□□□□ 0.07
MSH5-214ENST00000468602 USP19O94966 1318 aa15.46■□□□□ 0.07
MSH5-214ENST00000468602 MARF1Q9Y4F3 1742 aaKnown RBP15.46■□□□□ 0.07
MSH5-214ENST00000468602 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
MSH5-214ENST00000468602 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
MSH5-214ENST00000468602 SLIT3O75094 1523 aa15.46■□□□□ 0.07
MSH5-214ENST00000468602 CRYBG1Q9Y4K1 1723 aa15.46■□□□□ 0.06
MSH5-214ENST00000468602 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
MSH5-214ENST00000468602 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
MSH5-214ENST00000468602 PIP4K2BP78356 416 aa15.44■□□□□ 0.06
MSH5-214ENST00000468602 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
MSH5-214ENST00000468602 DDX17Q92841 729 aaKnown RBP15.43■□□□□ 0.06
MSH5-214ENST00000468602 AATKQ6ZMQ8 1374 aa15.43■□□□□ 0.06
MSH5-214ENST00000468602 PNPLA6Q8IY17 1366 aa15.43■□□□□ 0.06
MSH5-214ENST00000468602 PARD3Q8TEW0 1356 aa15.42■□□□□ 0.06
MSH5-214ENST00000468602 JCADQ9P266 1359 aa15.41■□□□□ 0.06
MSH5-214ENST00000468602 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
MSH5-214ENST00000468602 KIF24Q5T7B8 1368 aa15.4■□□□□ 0.06
MSH5-214ENST00000468602 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
MSH5-214ENST00000468602 ABCC6O95255 1503 aa15.4■□□□□ 0.06
MSH5-214ENST00000468602 NME9Q86XW9 330 aa15.4■□□□□ 0.06
MSH5-214ENST00000468602 CPDO75976 1380 aa15.39■□□□□ 0.05
MSH5-214ENST00000468602 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
MSH5-214ENST00000468602 RALBP1Q15311 655 aa15.39■□□□□ 0.05
MSH5-214ENST00000468602 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
MSH5-214ENST00000468602 NFAT5O94916 1531 aa15.38■□□□□ 0.05
MSH5-214ENST00000468602 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
MSH5-214ENST00000468602 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
MSH5-214ENST00000468602 NLRP6P59044 892 aa15.38■□□□□ 0.05
MSH5-214ENST00000468602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.38■□□□□ 0.05
MSH5-214ENST00000468602 COG3Q96JB2 828 aa15.38■□□□□ 0.05
MSH5-214ENST00000468602 SPATA31A6Q5VVP1 1343 aa15.38■□□□□ 0.05
MSH5-214ENST00000468602 INSRP06213 1382 aa15.36■□□□□ 0.05
MSH5-214ENST00000468602 PAK3O75914 559 aaPredicted RBP15.36■□□□□ 0.05
MSH5-214ENST00000468602 GGNBP2Q9H3C7 697 aa15.36■□□□□ 0.05
MSH5-214ENST00000468602 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
MSH5-214ENST00000468602 GCP02774 474 aa15.35■□□□□ 0.05
MSH5-214ENST00000468602 RGS17Q9UGC6 210 aaPredicted RBP15.34■□□□□ 0.05
MSH5-214ENST00000468602 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
MSH5-214ENST00000468602 MORC1Q86VD1 984 aa15.33■□□□□ 0.04
MSH5-214ENST00000468602 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
MSH5-214ENST00000468602 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
MSH5-214ENST00000468602 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
MSH5-214ENST00000468602 COL18A1P39060 1754 aa15.31■□□□□ 0.04
MSH5-214ENST00000468602 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
MSH5-214ENST00000468602 CC2D1BQ5T0F9 858 aaKnown RBP15.3■□□□□ 0.04
MSH5-214ENST00000468602 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
MSH5-214ENST00000468602 POLKQ9UBT6 870 aa15.3■□□□□ 0.04
MSH5-214ENST00000468602 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
MSH5-214ENST00000468602 CDK12Q9NYV4 1490 aaPredicted RBP15.29■□□□□ 0.04
MSH5-214ENST00000468602 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
MSH5-214ENST00000468602 BLMP54132 1417 aaPredicted RBP15.28■□□□□ 0.04
MSH5-214ENST00000468602 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
MSH5-214ENST00000468602 LTN1O94822 1766 aa15.27■□□□□ 0.04
MSH5-214ENST00000468602 COL14A1Q05707 1796 aaKnown RBP15.27■□□□□ 0.04
MSH5-214ENST00000468602 MAP3K19Q56UN5 1328 aa15.27■□□□□ 0.04
MSH5-214ENST00000468602 ANP32CO43423 234 aa15.27■□□□□ 0.04
MSH5-214ENST00000468602 NUTM2GQ5VZR2 741 aa15.27■□□□□ 0.04
MSH5-214ENST00000468602 LMOD2Q6P5Q4 547 aa15.27■□□□□ 0.04
MSH5-214ENST00000468602 FLT4P35916 1363 aa15.26■□□□□ 0.03
MSH5-214ENST00000468602 IP6K1Q92551 441 aa15.26■□□□□ 0.03
MSH5-214ENST00000468602 PEAK1Q9H792 1746 aa15.26■□□□□ 0.03
MSH5-214ENST00000468602 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
MSH5-214ENST00000468602 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
MSH5-214ENST00000468602 LRP6O75581 1613 aa15.25■□□□□ 0.03
MSH5-214ENST00000468602 CABLES1Q8TDN4 633 aa15.25■□□□□ 0.03
MSH5-214ENST00000468602 SLIT2O94813 1529 aa15.25■□□□□ 0.03
MSH5-214ENST00000468602 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
MSH5-214ENST00000468602 COL3A1P02461 1466 aaPredicted RBP15.24■□□□□ 0.03
MSH5-214ENST00000468602 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
MSH5-214ENST00000468602 HOXC9P31274 260 aa15.23■□□□□ 0.03
MSH5-214ENST00000468602 NCAPD2Q15021 1401 aa15.23■□□□□ 0.03
MSH5-214ENST00000468602 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
MSH5-214ENST00000468602 FAM83GA6ND36 823 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms