RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
COL27A1-203ENST00000468565 PLCH1Q4KWH8 1693 aa20.57■□□□□ 0.88
COL27A1-203ENST00000468565 ATRNO75882 1429 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 PPIP5K1Q6PFW1 1433 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 SLIT2O94813 1529 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 ACEP12821 1306 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 EVC2Q86UK5 1308 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
COL27A1-203ENST00000468565 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-203ENST00000468565 TRPC5Q9UL62 973 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-203ENST00000468565 CABLES1Q8TDN4 633 aa20.55■□□□□ 0.88
COL27A1-203ENST00000468565 CARD11Q9BXL7 1154 aa20.55■□□□□ 0.88
COL27A1-203ENST00000468565 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
COL27A1-203ENST00000468565 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
COL27A1-203ENST00000468565 CLSPNQ9HAW4 1339 aa20.54■□□□□ 0.88
COL27A1-203ENST00000468565 PHRF1Q9P1Y6 1649 aaKnown RBP20.53■□□□□ 0.88
COL27A1-203ENST00000468565 PAK3O75914 559 aaPredicted RBP20.53■□□□□ 0.88
COL27A1-203ENST00000468565 RGS12O14924 1447 aa20.52■□□□□ 0.87
COL27A1-203ENST00000468565 BRD4O60885 1362 aaPredicted RBP20.51■□□□□ 0.87
COL27A1-203ENST00000468565 COL14A1Q05707 1796 aaKnown RBP20.51■□□□□ 0.87
COL27A1-203ENST00000468565 AKAP12Q02952 1782 aa20.51■□□□□ 0.87
COL27A1-203ENST00000468565 NRAPQ86VF7 1730 aa20.49■□□□□ 0.87
COL27A1-203ENST00000468565 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
COL27A1-203ENST00000468565 PLEKHG5O94827 1062 aa20.49■□□□□ 0.87
COL27A1-203ENST00000468565 CABP1Q9NZU7 370 aa20.47■□□□□ 0.87
COL27A1-203ENST00000468565 TIMELESSQ9UNS1 1208 aa20.47■□□□□ 0.87
COL27A1-203ENST00000468565 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
COL27A1-203ENST00000468565 USP6P35125 1406 aa20.46■□□□□ 0.87
COL27A1-203ENST00000468565 GLI3P10071 1580 aa20.46■□□□□ 0.87
COL27A1-203ENST00000468565 FAM83GA6ND36 823 aa20.45■□□□□ 0.86
COL27A1-203ENST00000468565 GJD4Q96KN9 370 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-203ENST00000468565 NRKQ7Z2Y5 1582 aa20.44■□□□□ 0.86
COL27A1-203ENST00000468565 MON2Q7Z3U7 1717 aa20.43■□□□□ 0.86
COL27A1-203ENST00000468565 ABTB2Q8N961 1025 aa20.43■□□□□ 0.86
COL27A1-203ENST00000468565 SSH2Q76I76 1423 aa20.42■□□□□ 0.86
COL27A1-203ENST00000468565 USP19O94966 1318 aa20.41■□□□□ 0.86
COL27A1-203ENST00000468565 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
COL27A1-203ENST00000468565 VPS72Q15906 364 aa20.41■□□□□ 0.86
COL27A1-203ENST00000468565 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
COL27A1-203ENST00000468565 ZNF692Q9BU19 519 aaPredicted RBP20.41■□□□□ 0.86
COL27A1-203ENST00000468565 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
COL27A1-203ENST00000468565 NLRP13Q86W25 1043 aa20.39■□□□□ 0.86
COL27A1-203ENST00000468565 PUS7Q96PZ0 661 aaKnown RBP20.39■□□□□ 0.85
COL27A1-203ENST00000468565 PRDM11Q9NQV5 511 aa20.39■□□□□ 0.85
COL27A1-203ENST00000468565 BTG4Q9NY30 223 aa20.39■□□□□ 0.85
COL27A1-203ENST00000468565 KIAA0232Q92628 1395 aa20.38■□□□□ 0.85
COL27A1-203ENST00000468565 BRWD3Q6RI45 1802 aa20.38■□□□□ 0.85
COL27A1-203ENST00000468565 SLC24A1O60721 1099 aa20.38■□□□□ 0.85
COL27A1-203ENST00000468565 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
COL27A1-203ENST00000468565 UPF1Q92900 1129 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL27A1-203ENST00000468565 SLIT3O75094 1523 aa20.37■□□□□ 0.85
COL27A1-203ENST00000468565 ST20-MTHFSA0A0A6YYL1 179 aa20.37■□□□□ 0.85
COL27A1-203ENST00000468565 TESK2Q96S53 571 aa20.37■□□□□ 0.85
COL27A1-203ENST00000468565 CPDO75976 1380 aa20.37■□□□□ 0.85
COL27A1-203ENST00000468565 USP47Q96K76 1375 aa20.35■□□□□ 0.85
COL27A1-203ENST00000468565 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
COL27A1-203ENST00000468565 CD163L1Q9NR16 1453 aa20.35■□□□□ 0.85
COL27A1-203ENST00000468565 TTC21BQ7Z4L5 1316 aa20.34■□□□□ 0.85
COL27A1-203ENST00000468565 TTC21AQ8NDW8 1320 aa20.34■□□□□ 0.85
COL27A1-203ENST00000468565 USP54Q70EL1 1684 aa20.34■□□□□ 0.85
COL27A1-203ENST00000468565 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
COL27A1-203ENST00000468565 ZC3H6P61129 1189 aaKnown RBP20.34■□□□□ 0.85
COL27A1-203ENST00000468565 CCDC9Q9Y3X0 531 aaKnown RBP20.33■□□□□ 0.85
COL27A1-203ENST00000468565 ONECUT3O60422 494 aaPredicted RBP20.33■□□□□ 0.84
COL27A1-203ENST00000468565 GCP02774 474 aa20.33■□□□□ 0.84
COL27A1-203ENST00000468565 NLRP6P59044 892 aa20.33■□□□□ 0.84
COL27A1-203ENST00000468565 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
COL27A1-203ENST00000468565 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
COL27A1-203ENST00000468565 SPATA31A5Q5VU36 1347 aa20.3■□□□□ 0.84
COL27A1-203ENST00000468565 SPATA31A7Q8IWB4 1347 aa20.3■□□□□ 0.84
COL27A1-203ENST00000468565 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
COL27A1-203ENST00000468565 TMC1Q8TDI8 760 aa20.29■□□□□ 0.84
COL27A1-203ENST00000468565 HDGFL2Q7Z4V5 671 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-203ENST00000468565 SLC12A5Q9H2X9 1139 aa20.29■□□□□ 0.84
COL27A1-203ENST00000468565 COL18A1P39060 1754 aa20.29■□□□□ 0.84
COL27A1-203ENST00000468565 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
COL27A1-203ENST00000468565 SEPT12Q8IYM1 358 aa20.28■□□□□ 0.84
COL27A1-203ENST00000468565 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
COL27A1-203ENST00000468565 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.84
COL27A1-203ENST00000468565 EP400Q96L91 3159 aa20.27■□□□□ 0.84
COL27A1-203ENST00000468565 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
COL27A1-203ENST00000468565 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
COL27A1-203ENST00000468565 TMF1P82094 1093 aa20.26■□□□□ 0.83
COL27A1-203ENST00000468565 KCNH5Q8NCM2 988 aa20.25■□□□□ 0.83
COL27A1-203ENST00000468565 NFAT5O94916 1531 aa20.25■□□□□ 0.83
COL27A1-203ENST00000468565 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
COL27A1-203ENST00000468565 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
COL27A1-203ENST00000468565 STRN4Q9NRL3 753 aa20.25■□□□□ 0.83
COL27A1-203ENST00000468565 FAM98CQ17RN3 349 aaKnown RBP20.24■□□□□ 0.83
COL27A1-203ENST00000468565 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
COL27A1-203ENST00000468565 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
COL27A1-203ENST00000468565 EVA1CP58658 441 aa20.23■□□□□ 0.83
COL27A1-203ENST00000468565 ABCC6O95255 1503 aa20.22■□□□□ 0.83
COL27A1-203ENST00000468565 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL27A1-203ENST00000468565 LTN1O94822 1766 aa20.22■□□□□ 0.83
COL27A1-203ENST00000468565 CDCA8Q53HL2 280 aa20.21■□□□□ 0.83
COL27A1-203ENST00000468565 KRT27Q7Z3Y8 459 aa20.21■□□□□ 0.83
COL27A1-203ENST00000468565 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
COL27A1-203ENST00000468565 A0A0G2JS52 829 aa20.2■□□□□ 0.82
COL27A1-203ENST00000468565 MYT1Q01538 1121 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms