RNA–Protein interactions for RNA: ENST00000468532.5

CHKB-205, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,052 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-205ENST00000468532 CDK12Q9NYV4 1490 aaPredicted RBP44.24■■■■■ 4.67
CHKB-205ENST00000468532 TRPC5Q9UL62 973 aaPredicted RBP44.24■■■■■ 4.67
CHKB-205ENST00000468532 BCL9LQ86UU0 1499 aa44.22■■■■■ 4.67
CHKB-205ENST00000468532 ATRNO75882 1429 aa44.21■■■■■ 4.67
CHKB-205ENST00000468532 SLIT2O94813 1529 aa44.19■■■■■ 4.66
CHKB-205ENST00000468532 TNKS1BP1Q9C0C2 1729 aaKnown RBP44.17■■■■■ 4.66
CHKB-205ENST00000468532 CRYBG1Q9Y4K1 1723 aa44.17■■■■■ 4.66
CHKB-205ENST00000468532 CABP1Q9NZU7 370 aa44.15■■■■■ 4.66
CHKB-205ENST00000468532 PLCH1Q4KWH8 1693 aa44.15■■■■■ 4.66
CHKB-205ENST00000468532 RGS12O14924 1447 aa44.15■■■■■ 4.66
CHKB-205ENST00000468532 CLSPNQ9HAW4 1339 aa44.14■■■■■ 4.66
CHKB-205ENST00000468532 SBNO2Q9Y2G9 1366 aa44.14■■■■■ 4.66
CHKB-205ENST00000468532 UNC5CLQ8IV45 518 aa44.11■■■■■ 4.65
CHKB-205ENST00000468532 NWD2Q9ULI1 1742 aa44.09■■■■■ 4.65
CHKB-205ENST00000468532 NUTM2GQ5VZR2 741 aa44.07■■■■■ 4.65
CHKB-205ENST00000468532 PHRF1Q9P1Y6 1649 aaKnown RBP44.06■■■■■ 4.64
CHKB-205ENST00000468532 FAM83GA6ND36 823 aa44.05■■■■■ 4.64
CHKB-205ENST00000468532 ATAD2Q6PL18 1390 aa44.04■■■■■ 4.64
CHKB-205ENST00000468532 USP6P35125 1406 aa44.03■■■■■ 4.64
CHKB-205ENST00000468532 ABTB2Q8N961 1025 aa44.03■■■■■ 4.64
CHKB-205ENST00000468532 GJD4Q96KN9 370 aaPredicted RBP44.02■■■■■ 4.64
CHKB-205ENST00000468532 COL14A1Q05707 1796 aaKnown RBP44.02■■■■■ 4.64
CHKB-205ENST00000468532 BRD4O60885 1362 aaPredicted RBP44.02■■■■■ 4.64
CHKB-205ENST00000468532 TIMELESSQ9UNS1 1208 aa43.99■■■■■ 4.63
CHKB-205ENST00000468532 AKAP12Q02952 1782 aa43.97■■■■■ 4.63
CHKB-205ENST00000468532 GLI3P10071 1580 aa43.96■■■■■ 4.63
CHKB-205ENST00000468532 NRAPQ86VF7 1730 aa43.95■■■■■ 4.63
CHKB-205ENST00000468532 CCER1Q8TC90 406 aaPredicted RBP43.94■■■■■ 4.62
CHKB-205ENST00000468532 PRDM11Q9NQV5 511 aa43.94■■■■■ 4.62
CHKB-205ENST00000468532 VPS72Q15906 364 aa43.93■■■■■ 4.62
CHKB-205ENST00000468532 BTG4Q9NY30 223 aa43.93■■■■■ 4.62
CHKB-205ENST00000468532 NRKQ7Z2Y5 1582 aa43.92■■■■■ 4.62
CHKB-205ENST00000468532 ST20-MTHFSA0A0A6YYL1 179 aa43.92■■■■■ 4.62
CHKB-205ENST00000468532 KIAA0232Q92628 1395 aa43.92■■■■■ 4.62
CHKB-205ENST00000468532 NLRP13Q86W25 1043 aa43.91■■■■■ 4.62
CHKB-205ENST00000468532 USP19O94966 1318 aa43.91■■■■■ 4.62
CHKB-205ENST00000468532 SSH2Q76I76 1423 aa43.9■■■■■ 4.62
CHKB-205ENST00000468532 ZNF692Q9BU19 519 aaPredicted RBP43.89■■■■■ 4.62
CHKB-205ENST00000468532 CCDC9Q9Y3X0 531 aaKnown RBP43.89■■■■■ 4.62
CHKB-205ENST00000468532 ZC3H6P61129 1189 aaKnown RBP43.88■■■■■ 4.62
CHKB-205ENST00000468532 TESK2Q96S53 571 aa43.87■■■■■ 4.61
CHKB-205ENST00000468532 CPSF1Q10570 1443 aaKnown RBP43.86■■■■■ 4.61
CHKB-205ENST00000468532 UPF1Q92900 1129 aaKnown RBP eCLIP43.86■■■■■ 4.61
CHKB-205ENST00000468532 PIK3C2AO00443 1686 aa43.85■■■■■ 4.61
CHKB-205ENST00000468532 USP47Q96K76 1375 aa43.85■■■■■ 4.61
CHKB-205ENST00000468532 CHRNA2Q15822 529 aa43.84■■■■■ 4.61
CHKB-205ENST00000468532 NLRP6P59044 892 aa43.83■■■■■ 4.61
CHKB-205ENST00000468532 MON2Q7Z3U7 1717 aa43.82■■■■■ 4.61
CHKB-205ENST00000468532 KTN1Q86UP2 1357 aaKnown RBP43.82■■■■■ 4.61
CHKB-205ENST00000468532 TMC1Q8TDI8 760 aa43.82■■■■■ 4.61
CHKB-205ENST00000468532 TTC21BQ7Z4L5 1316 aa43.81■■■■■ 4.6
CHKB-205ENST00000468532 GCP02774 474 aa43.78■■■■■ 4.6
CHKB-205ENST00000468532 PUS7Q96PZ0 661 aaKnown RBP43.78■■■■■ 4.6
CHKB-205ENST00000468532 CPDO75976 1380 aa43.77■■■■■ 4.6
CHKB-205ENST00000468532 CD163L1Q9NR16 1453 aa43.76■■■■■ 4.6
CHKB-205ENST00000468532 SLC24A1O60721 1099 aa43.76■■■■■ 4.6
CHKB-205ENST00000468532 SLIT3O75094 1523 aa43.76■■■■■ 4.6
CHKB-205ENST00000468532 TTC21AQ8NDW8 1320 aa43.75■■■■■ 4.59
CHKB-205ENST00000468532 SLC12A5Q9H2X9 1139 aa43.75■■■■■ 4.59
CHKB-205ENST00000468532 BRWD3Q6RI45 1802 aa43.71■■■■■ 4.59
CHKB-205ENST00000468532 HDGFL2Q7Z4V5 671 aaPredicted RBP43.71■■■■■ 4.59
CHKB-205ENST00000468532 SEPT12Q8IYM1 358 aa43.7■■■■■ 4.59
CHKB-205ENST00000468532 LMO7Q8WWI1 1683 aa43.69■■■■■ 4.58
CHKB-205ENST00000468532 STRN4Q9NRL3 753 aa43.69■■■■■ 4.58
CHKB-205ENST00000468532 SPATA31A5Q5VU36 1347 aa43.69■■■■■ 4.58
CHKB-205ENST00000468532 SPATA31A7Q8IWB4 1347 aa43.69■■■■■ 4.58
CHKB-205ENST00000468532 ONECUT3O60422 494 aaPredicted RBP43.67■■■■■ 4.58
CHKB-205ENST00000468532 CAMTA1Q9Y6Y1 1673 aa43.66■■■■■ 4.58
CHKB-205ENST00000468532 TMF1P82094 1093 aa43.66■■■■■ 4.58
CHKB-205ENST00000468532 SUGP2Q8IX01 1082 aaKnown RBP eCLIP43.66■■■■■ 4.58
CHKB-205ENST00000468532 TERF2IPQ9NYB0 399 aa43.66■■■■■ 4.58
CHKB-205ENST00000468532 ZBTB7CA1YPR0 619 aa43.65■■■■■ 4.58
CHKB-205ENST00000468532 FAM98CQ17RN3 349 aaKnown RBP43.65■■■■■ 4.58
CHKB-205ENST00000468532 A0A1W2PP64 1363 aa43.65■■■■■ 4.58
CHKB-205ENST00000468532 A0A0G2JS52 829 aa43.64■■■■■ 4.58
CHKB-205ENST00000468532 MYT1Q01538 1121 aa43.64■■■■■ 4.58
CHKB-205ENST00000468532 NINLQ9Y2I6 1382 aa43.64■■■■■ 4.58
CHKB-205ENST00000468532 EVA1CP58658 441 aa43.61■■■■■ 4.57
CHKB-205ENST00000468532 EDC4Q6P2E9 1401 aaKnown RBP43.61■■■■■ 4.57
CHKB-205ENST00000468532 SPATA31A1Q5TZJ5 1347 aa43.58■■■■■ 4.57
CHKB-205ENST00000468532 KCNH5Q8NCM2 988 aa43.58■■■■■ 4.57
CHKB-205ENST00000468532 SOX12O15370 315 aa43.57■■■■■ 4.57
CHKB-205ENST00000468532 NME9Q86XW9 330 aa43.57■■■■■ 4.57
CHKB-205ENST00000468532 USP54Q70EL1 1684 aa43.56■■■■■ 4.56
CHKB-205ENST00000468532 ZRANB1Q9UGI0 708 aa43.56■■■■■ 4.56
CHKB-205ENST00000468532 AATKQ6ZMQ8 1374 aa43.55■■■■■ 4.56
CHKB-205ENST00000468532 USP31Q70CQ4 1352 aa43.55■■■■■ 4.56
CHKB-205ENST00000468532 EP400Q96L91 3159 aa43.55■■■■■ 4.56
CHKB-205ENST00000468532 COL5A2P05997 1499 aaPredicted RBP43.53■■■■■ 4.56
CHKB-205ENST00000468532 NFAT5O94916 1531 aa43.53■■■■■ 4.56
CHKB-205ENST00000468532 THSD7AQ9UPZ6 1657 aa43.53■■■■■ 4.56
CHKB-205ENST00000468532 COL18A1P39060 1754 aa43.52■■■■■ 4.56
CHKB-205ENST00000468532 LARP1Q6PKG0 1096 aaKnown RBP43.52■■■■■ 4.56
CHKB-205ENST00000468532 KRT27Q7Z3Y8 459 aa43.52■■■■■ 4.56
CHKB-205ENST00000468532 USP35Q9P2H5 1018 aa43.51■■■■■ 4.56
CHKB-205ENST00000468532 CDCA8Q53HL2 280 aa43.5■■■■■ 4.55
CHKB-205ENST00000468532 ARHGEF25Q86VW2 580 aa43.49■■■■■ 4.55
CHKB-205ENST00000468532 ANKRD36BQ8N2N9 1353 aa43.47■■■■■ 4.55
CHKB-205ENST00000468532 RGPD5Q99666 1765 aa43.42■■■■■ 4.54
CHKB-205ENST00000468532 AXIN2Q9Y2T1 843 aa43.42■■■■■ 4.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms