RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 SPATA31A5Q5VU36 1347 aa26.43■■□□□ 1.82
COPS6-206ENST00000468499 SPATA31A7Q8IWB4 1347 aa26.43■■□□□ 1.82
COPS6-206ENST00000468499 ACIN1Q9UKV3 1341 aaKnown RBP26.42■■□□□ 1.82
COPS6-206ENST00000468499 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
COPS6-206ENST00000468499 PHRF1Q9P1Y6 1649 aaKnown RBP26.42■■□□□ 1.82
COPS6-206ENST00000468499 A0A0G2JS52 829 aa26.41■■□□□ 1.82
COPS6-206ENST00000468499 MYT1Q01538 1121 aa26.41■■□□□ 1.82
COPS6-206ENST00000468499 POGKQ9P215 609 aa26.37■■□□□ 1.81
COPS6-206ENST00000468499 MINK1Q8N4C8 1332 aaPredicted RBP26.37■■□□□ 1.81
COPS6-206ENST00000468499 ARHGEF28Q8N1W1 1705 aaKnown RBP26.36■■□□□ 1.81
COPS6-206ENST00000468499 RREB1Q92766 1687 aa26.36■■□□□ 1.81
COPS6-206ENST00000468499 R3HDM1Q15032 1099 aaKnown RBP26.36■■□□□ 1.81
COPS6-206ENST00000468499 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
COPS6-206ENST00000468499 ATP7BP35670 1465 aa26.35■■□□□ 1.81
COPS6-206ENST00000468499 GPRASP1Q5JY77 1395 aa26.34■■□□□ 1.81
COPS6-206ENST00000468499 EZH2Q15910 746 aaKnown RBP26.34■■□□□ 1.81
COPS6-206ENST00000468499 ITSN1Q15811 1721 aa26.33■■□□□ 1.81
COPS6-206ENST00000468499 NUP188Q5SRE5 1749 aa26.32■■□□□ 1.8
COPS6-206ENST00000468499 SPATA31A1Q5TZJ5 1347 aa26.32■■□□□ 1.8
COPS6-206ENST00000468499 WASLO00401 505 aaPredicted RBP26.31■■□□□ 1.8
COPS6-206ENST00000468499 CAMKK2Q96RR4 588 aa26.31■■□□□ 1.8
COPS6-206ENST00000468499 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
COPS6-206ENST00000468499 KIAA0232Q92628 1395 aa26.31■■□□□ 1.8
COPS6-206ENST00000468499 PRDM11Q9NQV5 511 aa26.28■■□□□ 1.8
COPS6-206ENST00000468499 EIF3AQ14152 1382 aaKnown RBP26.28■■□□□ 1.8
COPS6-206ENST00000468499 NRKQ7Z2Y5 1582 aa26.28■■□□□ 1.8
COPS6-206ENST00000468499 CHRNA2Q15822 529 aa26.27■■□□□ 1.8
COPS6-206ENST00000468499 LMO7Q8WWI1 1683 aa26.26■■□□□ 1.79
COPS6-206ENST00000468499 TRIM37O94972 964 aa26.25■■□□□ 1.79
COPS6-206ENST00000468499 PAK3O75914 559 aaPredicted RBP26.24■■□□□ 1.79
COPS6-206ENST00000468499 CAMTA1Q9Y6Y1 1673 aa26.23■■□□□ 1.79
COPS6-206ENST00000468499 NGDNQ8NEJ9 315 aaKnown RBP26.23■■□□□ 1.79
COPS6-206ENST00000468499 RAB3GAP2Q9H2M9 1393 aa26.21■■□□□ 1.79
COPS6-206ENST00000468499 SSH2Q76I76 1423 aa26.21■■□□□ 1.79
COPS6-206ENST00000468499 STRN4Q9NRL3 753 aa26.2■■□□□ 1.78
COPS6-206ENST00000468499 ZC3H6P61129 1189 aaKnown RBP26.19■■□□□ 1.78
COPS6-206ENST00000468499 NUDT16Q96DE0 195 aaKnown RBP26.19■■□□□ 1.78
COPS6-206ENST00000468499 POLR3AO14802 1390 aaPredicted RBP26.19■■□□□ 1.78
COPS6-206ENST00000468499 NUTM2GQ5VZR2 741 aa26.18■■□□□ 1.78
COPS6-206ENST00000468499 FAM196AQ6ZSG2 479 aa26.18■■□□□ 1.78
COPS6-206ENST00000468499 KDM2AQ9Y2K7 1162 aa26.18■■□□□ 1.78
COPS6-206ENST00000468499 DCAF11Q8TEB1 546 aa26.17■■□□□ 1.78
COPS6-206ENST00000468499 PARD3Q8TEW0 1356 aa26.17■■□□□ 1.78
COPS6-206ENST00000468499 PARP4Q9UKK3 1724 aaKnown RBP26.17■■□□□ 1.78
COPS6-206ENST00000468499 APBA3O96018 575 aa26.16■■□□□ 1.78
COPS6-206ENST00000468499 PEAK1Q9H792 1746 aa26.16■■□□□ 1.78
COPS6-206ENST00000468499 BARGINQ6ZT62 677 aa26.15■■□□□ 1.78
COPS6-206ENST00000468499 USP35Q9P2H5 1018 aa26.15■■□□□ 1.78
COPS6-206ENST00000468499 LARP1Q6PKG0 1096 aaKnown RBP26.13■■□□□ 1.77
COPS6-206ENST00000468499 ACEP12821 1306 aa26.12■■□□□ 1.77
COPS6-206ENST00000468499 USP19O94966 1318 aa26.11■■□□□ 1.77
COPS6-206ENST00000468499 CPDO75976 1380 aa26.1■■□□□ 1.77
COPS6-206ENST00000468499 CDK19Q9BWU1 502 aa26.1■■□□□ 1.77
COPS6-206ENST00000468499 SBF2Q86WG5 1849 aa26.09■■□□□ 1.77
COPS6-206ENST00000468499 NBPF8Q3BBV2 869 aa26.09■■□□□ 1.77
COPS6-206ENST00000468499 LRRC37A3O60309 1634 aa26.08■■□□□ 1.77
COPS6-206ENST00000468499 COL5A2P05997 1499 aaPredicted RBP26.08■■□□□ 1.77
COPS6-206ENST00000468499 RGPD3A6NKT7 1758 aaPredicted RBP26.07■■□□□ 1.76
COPS6-206ENST00000468499 RGPD4Q7Z3J3 1758 aa26.07■■□□□ 1.76
COPS6-206ENST00000468499 KIAA1210Q9ULL0 1709 aa26.06■■□□□ 1.76
COPS6-206ENST00000468499 PLEKHG3A1L390 1219 aa26.06■■□□□ 1.76
COPS6-206ENST00000468499 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
COPS6-206ENST00000468499 WNK3Q9BYP7 1800 aa26.05■■□□□ 1.76
COPS6-206ENST00000468499 TCP11L2Q8N4U5 519 aa26.05■■□□□ 1.76
COPS6-206ENST00000468499 PDE3BQ13370 1112 aa26.04■■□□□ 1.76
COPS6-206ENST00000468499 CCDC61Q9Y6R9 512 aa26.03■■□□□ 1.76
COPS6-206ENST00000468499 COL18A1P39060 1754 aa26.02■■□□□ 1.76
COPS6-206ENST00000468499 EVA1CP58658 441 aa26.02■■□□□ 1.76
COPS6-206ENST00000468499 ABTB2Q8N961 1025 aa26.01■■□□□ 1.75
COPS6-206ENST00000468499 UTRNP46939 3433 aa26.01■■□□□ 1.75
COPS6-206ENST00000468499 STAC3Q96MF2 364 aa26■■□□□ 1.75
COPS6-206ENST00000468499 SLIT3O75094 1523 aa25.99■■□□□ 1.75
COPS6-206ENST00000468499 YY1P25490 414 aa25.99■■□□□ 1.75
COPS6-206ENST00000468499 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
COPS6-206ENST00000468499 THRAP3Q9Y2W1 955 aaKnown RBP25.98■■□□□ 1.75
COPS6-206ENST00000468499 CRB1P82279 1406 aa25.97■■□□□ 1.75
COPS6-206ENST00000468499 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
COPS6-206ENST00000468499 PIK3C2AO00443 1686 aa25.97■■□□□ 1.75
COPS6-206ENST00000468499 GCP02774 474 aa25.97■■□□□ 1.75
COPS6-206ENST00000468499 ANO8Q9HCE9 1232 aaPredicted RBP25.97■■□□□ 1.75
COPS6-206ENST00000468499 NBPF14Q5TI25 921 aa25.96■■□□□ 1.75
COPS6-206ENST00000468499 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
COPS6-206ENST00000468499 OVOS2A0A0J9YW53 1432 aa25.96■■□□□ 1.75
COPS6-206ENST00000468499 OVOS2Q6IE36 1432 aa25.96■■□□□ 1.75
COPS6-206ENST00000468499 KCNQ2O43526 872 aa25.95■■□□□ 1.74
COPS6-206ENST00000468499 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.74
COPS6-206ENST00000468499 PDGFDQ9GZP0 370 aaPredicted RBP25.94■■□□□ 1.74
COPS6-206ENST00000468499 NINLQ9Y2I6 1382 aa25.94■■□□□ 1.74
COPS6-206ENST00000468499 QRICH2Q9H0J4 1663 aa25.93■■□□□ 1.74
COPS6-206ENST00000468499 SPON1Q9HCB6 807 aa25.93■■□□□ 1.74
COPS6-206ENST00000468499 MYOM1P52179 1685 aa25.93■■□□□ 1.74
COPS6-206ENST00000468499 RGPD5Q99666 1765 aa25.92■■□□□ 1.74
COPS6-206ENST00000468499 USP6P35125 1406 aa25.91■■□□□ 1.74
COPS6-206ENST00000468499 AKAP12Q02952 1782 aa25.91■■□□□ 1.74
COPS6-206ENST00000468499 NLRP13Q86W25 1043 aa25.9■■□□□ 1.74
COPS6-206ENST00000468499 CABP2Q9NPB3 220 aa25.9■■□□□ 1.74
COPS6-206ENST00000468499 AATKQ6ZMQ8 1374 aa25.9■■□□□ 1.74
COPS6-206ENST00000468499 PROM2Q8N271 834 aa25.89■■□□□ 1.74
COPS6-206ENST00000468499 PLSCR1O15162 318 aa25.88■■□□□ 1.73
COPS6-206ENST00000468499 AXIN2Q9Y2T1 843 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms