RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
PCOLCE-204ENST00000468214 USP47Q96K76 1375 aa20.86■□□□□ 0.93
PCOLCE-204ENST00000468214 EVC2Q86UK5 1308 aa20.86■□□□□ 0.93
PCOLCE-204ENST00000468214 PPIP5K1Q6PFW1 1433 aa20.86■□□□□ 0.93
PCOLCE-204ENST00000468214 POLR3AO14802 1390 aaPredicted RBP20.85■□□□□ 0.93
PCOLCE-204ENST00000468214 PLEKHG3A1L390 1219 aa20.85■□□□□ 0.93
PCOLCE-204ENST00000468214 ATRNO75882 1429 aa20.85■□□□□ 0.93
PCOLCE-204ENST00000468214 BCL9LQ86UU0 1499 aa20.84■□□□□ 0.93
PCOLCE-204ENST00000468214 RGS12O14924 1447 aa20.84■□□□□ 0.93
PCOLCE-204ENST00000468214 SLIT2O94813 1529 aa20.83■□□□□ 0.92
PCOLCE-204ENST00000468214 UNC5CLQ8IV45 518 aa20.82■□□□□ 0.92
PCOLCE-204ENST00000468214 SBNO2Q9Y2G9 1366 aa20.81■□□□□ 0.92
PCOLCE-204ENST00000468214 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
PCOLCE-204ENST00000468214 NUTM2GQ5VZR2 741 aa20.79■□□□□ 0.92
PCOLCE-204ENST00000468214 CABP1Q9NZU7 370 aa20.79■□□□□ 0.92
PCOLCE-204ENST00000468214 PLCH1Q4KWH8 1693 aa20.79■□□□□ 0.92
PCOLCE-204ENST00000468214 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
PCOLCE-204ENST00000468214 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
PCOLCE-204ENST00000468214 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
PCOLCE-204ENST00000468214 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
PCOLCE-204ENST00000468214 CCDC9Q9Y3X0 531 aaKnown RBP20.77■□□□□ 0.92
PCOLCE-204ENST00000468214 NWD2Q9ULI1 1742 aa20.77■□□□□ 0.92
PCOLCE-204ENST00000468214 PRDM11Q9NQV5 511 aa20.76■□□□□ 0.91
PCOLCE-204ENST00000468214 CRYBG1Q9Y4K1 1723 aa20.75■□□□□ 0.91
PCOLCE-204ENST00000468214 ATAD2Q6PL18 1390 aa20.74■□□□□ 0.91
PCOLCE-204ENST00000468214 BRD4O60885 1362 aaPredicted RBP20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 COL14A1Q05707 1796 aaKnown RBP20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 EIF4G2P78344 907 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 VPS72Q15906 364 aa20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
PCOLCE-204ENST00000468214 USP6P35125 1406 aa20.72■□□□□ 0.91
PCOLCE-204ENST00000468214 PHRF1Q9P1Y6 1649 aaKnown RBP20.72■□□□□ 0.91
PCOLCE-204ENST00000468214 AKAP12Q02952 1782 aa20.72■□□□□ 0.91
PCOLCE-204ENST00000468214 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
PCOLCE-204ENST00000468214 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
PCOLCE-204ENST00000468214 TESK2Q96S53 571 aa20.71■□□□□ 0.91
PCOLCE-204ENST00000468214 GLI3P10071 1580 aa20.71■□□□□ 0.91
PCOLCE-204ENST00000468214 KIAA0232Q92628 1395 aa20.71■□□□□ 0.91
PCOLCE-204ENST00000468214 HSPA5P11021 654 aaKnown RBP20.69■□□□□ 0.9
PCOLCE-204ENST00000468214 ZNF692Q9BU19 519 aaPredicted RBP20.69■□□□□ 0.9
PCOLCE-204ENST00000468214 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
PCOLCE-204ENST00000468214 CHRNA2Q15822 529 aa20.68■□□□□ 0.9
PCOLCE-204ENST00000468214 MYOM1P52179 1685 aa20.67■□□□□ 0.9
PCOLCE-204ENST00000468214 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
PCOLCE-204ENST00000468214 NLRP6P59044 892 aa20.67■□□□□ 0.9
PCOLCE-204ENST00000468214 USP19O94966 1318 aa20.67■□□□□ 0.9
PCOLCE-204ENST00000468214 A0A0G2JS52 829 aa20.66■□□□□ 0.9
PCOLCE-204ENST00000468214 MYT1Q01538 1121 aa20.66■□□□□ 0.9
PCOLCE-204ENST00000468214 TMC1Q8TDI8 760 aa20.66■□□□□ 0.9
PCOLCE-204ENST00000468214 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
PCOLCE-204ENST00000468214 MON2Q7Z3U7 1717 aa20.65■□□□□ 0.9
PCOLCE-204ENST00000468214 KTN1Q86UP2 1357 aaKnown RBP20.65■□□□□ 0.9
PCOLCE-204ENST00000468214 TMF1P82094 1093 aa20.65■□□□□ 0.9
PCOLCE-204ENST00000468214 GCP02774 474 aa20.64■□□□□ 0.89
PCOLCE-204ENST00000468214 SEPT12Q8IYM1 358 aa20.64■□□□□ 0.89
PCOLCE-204ENST00000468214 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
PCOLCE-204ENST00000468214 TTC21BQ7Z4L5 1316 aa20.63■□□□□ 0.89
PCOLCE-204ENST00000468214 STRN4Q9NRL3 753 aa20.63■□□□□ 0.89
PCOLCE-204ENST00000468214 CPSF1Q10570 1443 aaKnown RBP20.62■□□□□ 0.89
PCOLCE-204ENST00000468214 TTC21AQ8NDW8 1320 aa20.62■□□□□ 0.89
PCOLCE-204ENST00000468214 PIK3C2AO00443 1686 aa20.62■□□□□ 0.89
PCOLCE-204ENST00000468214 ZBTB7CA1YPR0 619 aa20.62■□□□□ 0.89
PCOLCE-204ENST00000468214 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
PCOLCE-204ENST00000468214 CPDO75976 1380 aa20.61■□□□□ 0.89
PCOLCE-204ENST00000468214 EVA1CP58658 441 aa20.61■□□□□ 0.89
PCOLCE-204ENST00000468214 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
PCOLCE-204ENST00000468214 SPATA31A5Q5VU36 1347 aa20.6■□□□□ 0.89
PCOLCE-204ENST00000468214 SPATA31A7Q8IWB4 1347 aa20.6■□□□□ 0.89
PCOLCE-204ENST00000468214 BRWD3Q6RI45 1802 aa20.6■□□□□ 0.89
PCOLCE-204ENST00000468214 PUS7Q96PZ0 661 aaKnown RBP20.59■□□□□ 0.89
PCOLCE-204ENST00000468214 SLC12A5Q9H2X9 1139 aa20.59■□□□□ 0.89
PCOLCE-204ENST00000468214 SLIT3O75094 1523 aa20.58■□□□□ 0.89
PCOLCE-204ENST00000468214 ONECUT3O60422 494 aaPredicted RBP20.58■□□□□ 0.89
PCOLCE-204ENST00000468214 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
PCOLCE-204ENST00000468214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.89
PCOLCE-204ENST00000468214 TERF2IPQ9NYB0 399 aa20.58■□□□□ 0.89
PCOLCE-204ENST00000468214 SOX12O15370 315 aa20.57■□□□□ 0.88
PCOLCE-204ENST00000468214 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
PCOLCE-204ENST00000468214 CAMTA1Q9Y6Y1 1673 aa20.56■□□□□ 0.88
PCOLCE-204ENST00000468214 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
PCOLCE-204ENST00000468214 KCNH5Q8NCM2 988 aa20.55■□□□□ 0.88
PCOLCE-204ENST00000468214 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
PCOLCE-204ENST00000468214 NINLQ9Y2I6 1382 aa20.55■□□□□ 0.88
PCOLCE-204ENST00000468214 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
PCOLCE-204ENST00000468214 SPATA31A1Q5TZJ5 1347 aa20.54■□□□□ 0.88
PCOLCE-204ENST00000468214 LARP1Q6PKG0 1096 aaKnown RBP20.53■□□□□ 0.88
PCOLCE-204ENST00000468214 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
PCOLCE-204ENST00000468214 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
PCOLCE-204ENST00000468214 AATKQ6ZMQ8 1374 aa20.52■□□□□ 0.88
PCOLCE-204ENST00000468214 NME9Q86XW9 330 aa20.52■□□□□ 0.88
PCOLCE-204ENST00000468214 CCDC125Q86Z20 511 aa20.52■□□□□ 0.88
PCOLCE-204ENST00000468214 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.88
PCOLCE-204ENST00000468214 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
PCOLCE-204ENST00000468214 EP400Q96L91 3159 aa20.51■□□□□ 0.87
PCOLCE-204ENST00000468214 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
PCOLCE-204ENST00000468214 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
PCOLCE-204ENST00000468214 THSD7AQ9UPZ6 1657 aa20.49■□□□□ 0.87
PCOLCE-204ENST00000468214 SF3B2Q13435 895 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms