RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PLCH1Q4KWH8 1693 aa21.6■■□□□ 1.05
ATG4B-215ENST00000468018 NGLY1Q96IV0 654 aa21.6■■□□□ 1.05
ATG4B-215ENST00000468018 PHRF1Q9P1Y6 1649 aaKnown RBP21.59■■□□□ 1.05
ATG4B-215ENST00000468018 ATRNO75882 1429 aa21.58■■□□□ 1.05
ATG4B-215ENST00000468018 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
ATG4B-215ENST00000468018 BRD4O60885 1362 aaPredicted RBP21.56■■□□□ 1.04
ATG4B-215ENST00000468018 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
ATG4B-215ENST00000468018 NRAPQ86VF7 1730 aa21.55■■□□□ 1.04
ATG4B-215ENST00000468018 USP21Q9UK80 565 aa21.55■■□□□ 1.04
ATG4B-215ENST00000468018 NRKQ7Z2Y5 1582 aa21.54■■□□□ 1.04
ATG4B-215ENST00000468018 RXRBP28702 533 aa21.54■■□□□ 1.04
ATG4B-215ENST00000468018 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
ATG4B-215ENST00000468018 MON2Q7Z3U7 1717 aa21.54■■□□□ 1.04
ATG4B-215ENST00000468018 USP6P35125 1406 aa21.54■■□□□ 1.04
ATG4B-215ENST00000468018 COL14A1Q05707 1796 aaKnown RBP21.53■■□□□ 1.04
ATG4B-215ENST00000468018 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
ATG4B-215ENST00000468018 LMOD2Q6P5Q4 547 aa21.53■■□□□ 1.04
ATG4B-215ENST00000468018 CABP1Q9NZU7 370 aa21.53■■□□□ 1.04
ATG4B-215ENST00000468018 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
ATG4B-215ENST00000468018 TESK2Q96S53 571 aa21.52■■□□□ 1.04
ATG4B-215ENST00000468018 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
ATG4B-215ENST00000468018 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
ATG4B-215ENST00000468018 RGS12O14924 1447 aa21.51■■□□□ 1.03
ATG4B-215ENST00000468018 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
ATG4B-215ENST00000468018 PAK3O75914 559 aaPredicted RBP21.5■■□□□ 1.03
ATG4B-215ENST00000468018 GLI3P10071 1580 aa21.49■■□□□ 1.03
ATG4B-215ENST00000468018 PUS7Q96PZ0 661 aaKnown RBP21.49■■□□□ 1.03
ATG4B-215ENST00000468018 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
ATG4B-215ENST00000468018 UNC5CLQ8IV45 518 aa21.48■■□□□ 1.03
ATG4B-215ENST00000468018 USP19O94966 1318 aa21.48■■□□□ 1.03
ATG4B-215ENST00000468018 ST20-MTHFSA0A0A6YYL1 179 aa21.47■■□□□ 1.03
ATG4B-215ENST00000468018 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
ATG4B-215ENST00000468018 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
ATG4B-215ENST00000468018 HAP1P54257 671 aaPredicted RBP21.46■■□□□ 1.03
ATG4B-215ENST00000468018 USP47Q96K76 1375 aa21.46■■□□□ 1.03
ATG4B-215ENST00000468018 SLIT3O75094 1523 aa21.45■■□□□ 1.02
ATG4B-215ENST00000468018 CCER1Q8TC90 406 aaPredicted RBP21.44■■□□□ 1.02
ATG4B-215ENST00000468018 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
ATG4B-215ENST00000468018 LMO7Q8WWI1 1683 aa21.44■■□□□ 1.02
ATG4B-215ENST00000468018 ABTB2Q8N961 1025 aa21.43■■□□□ 1.02
ATG4B-215ENST00000468018 GJD4Q96KN9 370 aaPredicted RBP21.43■■□□□ 1.02
ATG4B-215ENST00000468018 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
ATG4B-215ENST00000468018 CPDO75976 1380 aa21.41■■□□□ 1.02
ATG4B-215ENST00000468018 KIAA0232Q92628 1395 aa21.41■■□□□ 1.02
ATG4B-215ENST00000468018 SLC24A1O60721 1099 aa21.41■■□□□ 1.02
ATG4B-215ENST00000468018 VPS72Q15906 364 aa21.41■■□□□ 1.02
ATG4B-215ENST00000468018 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
ATG4B-215ENST00000468018 TTC21BQ7Z4L5 1316 aa21.4■■□□□ 1.02
ATG4B-215ENST00000468018 BRWD3Q6RI45 1802 aa21.4■■□□□ 1.02
ATG4B-215ENST00000468018 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
ATG4B-215ENST00000468018 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
ATG4B-215ENST00000468018 TTC21AQ8NDW8 1320 aa21.38■■□□□ 1.01
ATG4B-215ENST00000468018 COL18A1P39060 1754 aa21.38■■□□□ 1.01
ATG4B-215ENST00000468018 KTN1Q86UP2 1357 aaKnown RBP21.37■■□□□ 1.01
ATG4B-215ENST00000468018 BTG4Q9NY30 223 aa21.37■■□□□ 1.01
ATG4B-215ENST00000468018 SLC12A5Q9H2X9 1139 aa21.36■■□□□ 1.01
ATG4B-215ENST00000468018 PRDM11Q9NQV5 511 aa21.36■■□□□ 1.01
ATG4B-215ENST00000468018 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
ATG4B-215ENST00000468018 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
ATG4B-215ENST00000468018 ONECUT3O60422 494 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-215ENST00000468018 GCP02774 474 aa21.35■■□□□ 1.01
ATG4B-215ENST00000468018 MYOM1P52179 1685 aa21.34■■□□□ 1.01
ATG4B-215ENST00000468018 NLRP6P59044 892 aa21.34■■□□□ 1.01
ATG4B-215ENST00000468018 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
ATG4B-215ENST00000468018 USP31Q70CQ4 1352 aa21.34■■□□□ 1.01
ATG4B-215ENST00000468018 NFAT5O94916 1531 aa21.34■■□□□ 1.01
ATG4B-215ENST00000468018 ZC3H6P61129 1189 aaKnown RBP21.33■■□□□ 1.01
ATG4B-215ENST00000468018 THSD7AQ9UPZ6 1657 aa21.32■■□□□ 1
ATG4B-215ENST00000468018 TMF1P82094 1093 aa21.32■■□□□ 1
ATG4B-215ENST00000468018 UPF1Q92900 1129 aaKnown RBP eCLIP21.32■■□□□ 1
ATG4B-215ENST00000468018 CHRNA2Q15822 529 aa21.31■■□□□ 1
ATG4B-215ENST00000468018 TMC1Q8TDI8 760 aa21.31■■□□□ 1
ATG4B-215ENST00000468018 RGPD5Q99666 1765 aa21.31■■□□□ 1
ATG4B-215ENST00000468018 SPATA31A5Q5VU36 1347 aa21.3■■□□□ 1
ATG4B-215ENST00000468018 SPATA31A7Q8IWB4 1347 aa21.3■■□□□ 1
ATG4B-215ENST00000468018 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
ATG4B-215ENST00000468018 TERF2IPQ9NYB0 399 aa21.29■■□□□ 1
ATG4B-215ENST00000468018 EP400Q96L91 3159 aa21.29■■□□□ 1
ATG4B-215ENST00000468018 ABCC6O95255 1503 aa21.29■■□□□ 1
ATG4B-215ENST00000468018 LTN1O94822 1766 aa21.28■■□□□ 1
ATG4B-215ENST00000468018 COL5A2P05997 1499 aaPredicted RBP21.28■■□□□ 1
ATG4B-215ENST00000468018 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
ATG4B-215ENST00000468018 ANKRD36BQ8N2N9 1353 aa21.28■■□□□ 1
ATG4B-215ENST00000468018 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
ATG4B-215ENST00000468018 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
ATG4B-215ENST00000468018 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
ATG4B-215ENST00000468018 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
ATG4B-215ENST00000468018 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
ATG4B-215ENST00000468018 NME9Q86XW9 330 aa21.25■□□□□ 0.99
ATG4B-215ENST00000468018 SEPT12Q8IYM1 358 aa21.25■□□□□ 0.99
ATG4B-215ENST00000468018 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
ATG4B-215ENST00000468018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.24■□□□□ 0.991e-8■□□□□ 9.2
ATG4B-215ENST00000468018 ZRANB1Q9UGI0 708 aa21.24■□□□□ 0.99
ATG4B-215ENST00000468018 CCDC9Q9Y3X0 531 aaKnown RBP21.24■□□□□ 0.99
ATG4B-215ENST00000468018 WNK3Q9BYP7 1800 aa21.23■□□□□ 0.99
ATG4B-215ENST00000468018 KIF20BQ96Q89 1820 aa21.22■□□□□ 0.99
ATG4B-215ENST00000468018 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
ATG4B-215ENST00000468018 PARP4Q9UKK3 1724 aaKnown RBP21.21■□□□□ 0.99
ATG4B-215ENST00000468018 EIF4G2P78344 907 aaKnown RBP eCLIP21.2■□□□□ 0.98
ATG4B-215ENST00000468018 LARP1Q6PKG0 1096 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms