RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 PAK3O75914 559 aaPredicted RBP27.65■■■□□ 2.02
COL1A2-204ENST00000467931 SF3B2Q13435 895 aaKnown RBP27.63■■■□□ 2.01
COL1A2-204ENST00000467931 HRCP23327 699 aa27.62■■■□□ 2.01
COL1A2-204ENST00000467931 SRCAPQ6ZRS2 3230 aa27.61■■■□□ 2.01
COL1A2-204ENST00000467931 BTG4Q9NY30 223 aa27.61■■■□□ 2.01
COL1A2-204ENST00000467931 KRT27Q7Z3Y8 459 aa27.6■■■□□ 2.01
COL1A2-204ENST00000467931 ATP7BP35670 1465 aa27.59■■■□□ 2.01
COL1A2-204ENST00000467931 KIAA1210Q9ULL0 1709 aa27.59■■■□□ 2.01
COL1A2-204ENST00000467931 PHRF1Q9P1Y6 1649 aaKnown RBP27.57■■■□□ 2
COL1A2-204ENST00000467931 FAM98CQ17RN3 349 aaKnown RBP27.57■■■□□ 2
COL1A2-204ENST00000467931 TOPAZ1Q8N9V7 1692 aa27.56■■■□□ 2
COL1A2-204ENST00000467931 DEFB132Q7Z7B7 95 aa27.56■■■□□ 2
COL1A2-204ENST00000467931 NUDT16Q96DE0 195 aaKnown RBP27.56■■■□□ 2
COL1A2-204ENST00000467931 ONECUT3O60422 494 aaPredicted RBP27.55■■■□□ 2
COL1A2-204ENST00000467931 PRDM11Q9NQV5 511 aa27.53■■■□□ 2
COL1A2-204ENST00000467931 CDK19Q9BWU1 502 aa27.51■■□□□ 1.99
COL1A2-204ENST00000467931 RGPD1P0DJD0 1748 aa27.5■■□□□ 1.99
COL1A2-204ENST00000467931 NUTM2GQ5VZR2 741 aa27.48■■□□□ 1.99
COL1A2-204ENST00000467931 KIAA0232Q92628 1395 aa27.47■■□□□ 1.99
COL1A2-204ENST00000467931 THSD7AQ9UPZ6 1657 aa27.46■■□□□ 1.99
COL1A2-204ENST00000467931 SPATA31A5Q5VU36 1347 aa27.46■■□□□ 1.99
COL1A2-204ENST00000467931 SPATA31A7Q8IWB4 1347 aa27.46■■□□□ 1.99
COL1A2-204ENST00000467931 BAG6P46379 1132 aa27.45■■□□□ 1.98
COL1A2-204ENST00000467931 CHRNA2Q15822 529 aa27.45■■□□□ 1.98
COL1A2-204ENST00000467931 ACEP12821 1306 aa27.44■■□□□ 1.98
COL1A2-204ENST00000467931 QRICH2Q9H0J4 1663 aa27.44■■□□□ 1.98
COL1A2-204ENST00000467931 STRN4Q9NRL3 753 aa27.44■■□□□ 1.98
COL1A2-204ENST00000467931 ZC3H6P61129 1189 aaKnown RBP27.43■■□□□ 1.98
COL1A2-204ENST00000467931 NBPF1Q3BBV0 1214 aa27.43■■□□□ 1.98
COL1A2-204ENST00000467931 CCDC61Q9Y6R9 512 aa27.43■■□□□ 1.98
COL1A2-204ENST00000467931 POLR3AO14802 1390 aaPredicted RBP27.43■■□□□ 1.98
COL1A2-204ENST00000467931 FAM182BQ5T319 152 aa27.42■■□□□ 1.98
COL1A2-204ENST00000467931 NRKQ7Z2Y5 1582 aa27.41■■□□□ 1.98
COL1A2-204ENST00000467931 NBPF8Q3BBV2 869 aa27.41■■□□□ 1.98
COL1A2-204ENST00000467931 SRPK2P78362 688 aaKnown RBP27.4■■□□□ 1.98
COL1A2-204ENST00000467931 TNS1Q9HBL0 1735 aaKnown RBP27.39■■□□□ 1.98
COL1A2-204ENST00000467931 CENPJQ9HC77 1338 aaPredicted RBP27.38■■□□□ 1.97
COL1A2-204ENST00000467931 PLEKHG3A1L390 1219 aa27.37■■□□□ 1.97
COL1A2-204ENST00000467931 PPIP5K1Q6PFW1 1433 aa27.37■■□□□ 1.97
COL1A2-204ENST00000467931 ABTB2Q8N961 1025 aa27.37■■□□□ 1.97
COL1A2-204ENST00000467931 SPATA31A1Q5TZJ5 1347 aa27.37■■□□□ 1.97
COL1A2-204ENST00000467931 EVA1CP58658 441 aa27.35■■□□□ 1.97
COL1A2-204ENST00000467931 USP35Q9P2H5 1018 aa27.35■■□□□ 1.97
COL1A2-204ENST00000467931 EN1Q05925 392 aaPredicted RBP27.34■■□□□ 1.97
COL1A2-204ENST00000467931 LRP5O75197 1615 aa27.34■■□□□ 1.97
COL1A2-204ENST00000467931 PSDA5PKW4 1024 aaPredicted RBP27.33■■□□□ 1.97
COL1A2-204ENST00000467931 CABP2Q9NPB3 220 aa27.33■■□□□ 1.97
COL1A2-204ENST00000467931 SSH2Q76I76 1423 aa27.32■■□□□ 1.96
COL1A2-204ENST00000467931 LMO7Q8WWI1 1683 aa27.31■■□□□ 1.96
COL1A2-204ENST00000467931 CAMTA1Q9Y6Y1 1673 aa27.3■■□□□ 1.96
COL1A2-204ENST00000467931 NLRP13Q86W25 1043 aa27.29■■□□□ 1.96
COL1A2-204ENST00000467931 TRPM1Q7Z4N2 1603 aa27.29■■□□□ 1.96
COL1A2-204ENST00000467931 USP19O94966 1318 aa27.28■■□□□ 1.96
COL1A2-204ENST00000467931 ZBTB7CA1YPR0 619 aa27.27■■□□□ 1.96
COL1A2-204ENST00000467931 CPDO75976 1380 aa27.26■■□□□ 1.95
COL1A2-204ENST00000467931 FAM196AQ6ZSG2 479 aa27.26■■□□□ 1.95
COL1A2-204ENST00000467931 TRIM37O94972 964 aa27.25■■□□□ 1.95
COL1A2-204ENST00000467931 LARP1Q6PKG0 1096 aaKnown RBP27.25■■□□□ 1.95
COL1A2-204ENST00000467931 L3MBTL2Q969R5 705 aa27.25■■□□□ 1.95
COL1A2-204ENST00000467931 DISP2A7MBM2 1401 aa27.24■■□□□ 1.95
COL1A2-204ENST00000467931 PDE3BQ13370 1112 aa27.24■■□□□ 1.95
COL1A2-204ENST00000467931 GCP02774 474 aa27.23■■□□□ 1.95
COL1A2-204ENST00000467931 BARGINQ6ZT62 677 aa27.23■■□□□ 1.95
COL1A2-204ENST00000467931 CABP1Q9NZU7 370 aa27.23■■□□□ 1.95
COL1A2-204ENST00000467931 USP6P35125 1406 aa27.23■■□□□ 1.95
COL1A2-204ENST00000467931 EZH2Q15910 746 aaKnown RBP27.22■■□□□ 1.95
COL1A2-204ENST00000467931 TCP11L2Q8N4U5 519 aa27.22■■□□□ 1.95
COL1A2-204ENST00000467931 BRD4O60885 1362 aaPredicted RBP27.22■■□□□ 1.95
COL1A2-204ENST00000467931 PIK3C2AO00443 1686 aa27.21■■□□□ 1.95
COL1A2-204ENST00000467931 PARP4Q9UKK3 1724 aaKnown RBP27.21■■□□□ 1.95
COL1A2-204ENST00000467931 COL5A2P05997 1499 aaPredicted RBP27.2■■□□□ 1.95
COL1A2-204ENST00000467931 NLRP6P59044 892 aa27.2■■□□□ 1.94
COL1A2-204ENST00000467931 R3HDM1Q15032 1099 aaKnown RBP27.2■■□□□ 1.94
COL1A2-204ENST00000467931 SIN3AQ96ST3 1273 aa27.2■■□□□ 1.94
COL1A2-204ENST00000467931 EVC2Q86UK5 1308 aa27.19■■□□□ 1.94
COL1A2-204ENST00000467931 NEUROD1Q13562 356 aa27.19■■□□□ 1.94
COL1A2-204ENST00000467931 AKAP12Q02952 1782 aa27.19■■□□□ 1.94
COL1A2-204ENST00000467931 APBA3O96018 575 aa27.18■■□□□ 1.94
COL1A2-204ENST00000467931 ROCK2O75116 1388 aaKnown RBP27.18■■□□□ 1.94
COL1A2-204ENST00000467931 RREB1Q92766 1687 aa27.17■■□□□ 1.94
COL1A2-204ENST00000467931 SLIT3O75094 1523 aa27.16■■□□□ 1.94
COL1A2-204ENST00000467931 THRAP3Q9Y2W1 955 aaKnown RBP27.16■■□□□ 1.94
COL1A2-204ENST00000467931 CRB1P82279 1406 aa27.15■■□□□ 1.94
COL1A2-204ENST00000467931 RGPD5Q99666 1765 aa27.14■■□□□ 1.94
COL1A2-204ENST00000467931 WNK3Q9BYP7 1800 aa27.14■■□□□ 1.94
COL1A2-204ENST00000467931 NUP188Q5SRE5 1749 aa27.14■■□□□ 1.94
COL1A2-204ENST00000467931 CAMKK2Q96RR4 588 aa27.14■■□□□ 1.94
COL1A2-204ENST00000467931 PARD3Q8TEW0 1356 aa27.12■■□□□ 1.93
COL1A2-204ENST00000467931 COL18A1P39060 1754 aa27.12■■□□□ 1.93
COL1A2-204ENST00000467931 LRRC37A3O60309 1634 aa27.11■■□□□ 1.93
COL1A2-204ENST00000467931 AATKQ6ZMQ8 1374 aa27.1■■□□□ 1.93
COL1A2-204ENST00000467931 SBF2Q86WG5 1849 aa27.1■■□□□ 1.93
COL1A2-204ENST00000467931 TOM1L2Q6ZVM7 507 aa27.08■■□□□ 1.93
COL1A2-204ENST00000467931 SOX12O15370 315 aa27.07■■□□□ 1.92
COL1A2-204ENST00000467931 PEAK1Q9H792 1746 aa27.06■■□□□ 1.92
COL1A2-204ENST00000467931 TTC21BQ7Z4L5 1316 aa27.06■■□□□ 1.92
COL1A2-204ENST00000467931 OVOS2A0A0G2JMS6 1433 aa27.06■■□□□ 1.92
COL1A2-204ENST00000467931 OVOS2A0A0J9YW53 1432 aa27.06■■□□□ 1.92
COL1A2-204ENST00000467931 CPSF1Q10570 1443 aaKnown RBP27.06■■□□□ 1.92
COL1A2-204ENST00000467931 OVOS2Q6IE36 1432 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms