RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
LCA5-203ENST00000467898 MYCBPQ99417 103 aaPredicted RBP11.48□□□□□ -0.57
LCA5-203ENST00000467898 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
LCA5-203ENST00000467898 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
LCA5-203ENST00000467898 RBM25P49756 843 aaKnown RBP11.47□□□□□ -0.57
LCA5-203ENST00000467898 FAM9BQ8IZU0 186 aa11.47□□□□□ -0.57
LCA5-203ENST00000467898 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
LCA5-203ENST00000467898 EXOC6Q8TAG9 804 aa11.47□□□□□ -0.57
LCA5-203ENST00000467898 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
LCA5-203ENST00000467898 ZNF518AQ6AHZ1 1483 aa11.47□□□□□ -0.57
LCA5-203ENST00000467898 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
LCA5-203ENST00000467898 SATB1Q01826 763 aa11.46□□□□□ -0.57
LCA5-203ENST00000467898 BANK1Q8NDB2 785 aa11.46□□□□□ -0.57
LCA5-203ENST00000467898 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.57
LCA5-203ENST00000467898 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
LCA5-203ENST00000467898 CD109Q6YHK3 1445 aa11.46□□□□□ -0.58
LCA5-203ENST00000467898 POGZQ7Z3K3 1410 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
LCA5-203ENST00000467898 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 MADDQ8WXG6 1647 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 ATP2B3Q16720 1220 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
LCA5-203ENST00000467898 MAP3K4Q9Y6R4 1608 aa11.44□□□□□ -0.58
LCA5-203ENST00000467898 BRPF1P55201 1214 aaPredicted RBP11.44□□□□□ -0.58
LCA5-203ENST00000467898 NCAPGQ9BPX3 1015 aa11.44□□□□□ -0.58
LCA5-203ENST00000467898 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
LCA5-203ENST00000467898 HECW2Q9P2P5 1572 aa11.44□□□□□ -0.58
LCA5-203ENST00000467898 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 PPRC1Q5VV67 1664 aaKnown RBP11.43□□□□□ -0.58
LCA5-203ENST00000467898 CAPN2P17655 700 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 NBPF11Q86T75 865 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
LCA5-203ENST00000467898 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 CENPQQ7L2Z9 268 aaPredicted RBP11.43□□□□□ -0.58
LCA5-203ENST00000467898 PSMD1Q99460 953 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 EFCAB6Q5THR3 1501 aa11.43□□□□□ -0.58
LCA5-203ENST00000467898 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
LCA5-203ENST00000467898 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
LCA5-203ENST00000467898 ZKSCAN5Q9Y2L8 839 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 RAD50Q92878 1312 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
LCA5-203ENST00000467898 SMC4Q9NTJ3 1288 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 OGFRQ9NZT2 677 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 ZNF710Q8N1W2 664 aa11.42□□□□□ -0.58
LCA5-203ENST00000467898 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 NEO1Q92859 1461 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 HSP90AB1P08238 724 aaKnown RBP11.41□□□□□ -0.58
LCA5-203ENST00000467898 NASPP49321 788 aaPredicted RBP11.41□□□□□ -0.58
LCA5-203ENST00000467898 RICTORQ6R327 1708 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 IQGAP1P46940 1657 aa11.41□□□□□ -0.58
LCA5-203ENST00000467898 GLI2P10070 1586 aa11.4□□□□□ -0.58
LCA5-203ENST00000467898 LOC102724159A0A0B4J2E5 919 aa11.4□□□□□ -0.58
LCA5-203ENST00000467898 TTC36A6NLP5 189 aa11.4□□□□□ -0.58
LCA5-203ENST00000467898 PWP2Q15269 919 aaKnown RBP11.4□□□□□ -0.58
LCA5-203ENST00000467898 RGL3Q3MIN7 710 aa11.4□□□□□ -0.58
LCA5-203ENST00000467898 CHMP5Q9NZZ3 219 aa11.4□□□□□ -0.58
LCA5-203ENST00000467898 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
LCA5-203ENST00000467898 ST20-MTHFSA0A0A6YYL1 179 aa11.39□□□□□ -0.59
LCA5-203ENST00000467898 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
LCA5-203ENST00000467898 KIF1CO43896 1103 aaKnown RBP11.39□□□□□ -0.59
LCA5-203ENST00000467898 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
LCA5-203ENST00000467898 KIF3BO15066 747 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
LCA5-203ENST00000467898 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 PDLIM2Q96JY6 352 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 UGGT1Q9NYU2 1555 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 SH3BP1Q9Y3L3 701 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 KANK1Q14678 1352 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
LCA5-203ENST00000467898 FEZ2Q9UHY8 353 aaPredicted RBP11.38□□□□□ -0.59
LCA5-203ENST00000467898 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 KIF16BQ96L93 1317 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 DIP2CQ9Y2E4 1556 aa11.38□□□□□ -0.59
LCA5-203ENST00000467898 XPCQ01831 940 aaPredicted RBP11.38□□□□□ -0.59
LCA5-203ENST00000467898 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
LCA5-203ENST00000467898 NLRP1Q9C000 1473 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 COL17A1Q9UMD9 1497 aaPredicted RBP11.37□□□□□ -0.59
LCA5-203ENST00000467898 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
LCA5-203ENST00000467898 GTF2A1P52655 376 aaPredicted RBP11.37□□□□□ -0.59
LCA5-203ENST00000467898 RCAN3Q9UKA8 241 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 KIF1BO60333 1816 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 USP19O94966 1318 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 TMEM132AQ24JP5 1023 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
LCA5-203ENST00000467898 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.37□□□□□ -0.59
LCA5-203ENST00000467898 IGSF3O75054 1194 aa11.36□□□□□ -0.59
LCA5-203ENST00000467898 PRR29P0C7W0 189 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms