RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-204ENST00000467852 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
VPS26A-204ENST00000467852 CASZ1Q86V15 1759 aa18.15■□□□□ 0.5
VPS26A-204ENST00000467852 PTGER2P43116 358 aa18.15■□□□□ 0.5
VPS26A-204ENST00000467852 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-204ENST00000467852 RRBP1Q9P2E9 1410 aaKnown RBP18.14■□□□□ 0.49
VPS26A-204ENST00000467852 GPR162Q16538 588 aa18.13■□□□□ 0.49
VPS26A-204ENST00000467852 PHF8Q9UPP1 1060 aa18.13■□□□□ 0.49
VPS26A-204ENST00000467852 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
VPS26A-204ENST00000467852 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
VPS26A-204ENST00000467852 NUP155O75694 1391 aa18.11■□□□□ 0.49
VPS26A-204ENST00000467852 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
VPS26A-204ENST00000467852 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
VPS26A-204ENST00000467852 HSPA6P17066 643 aa18.1■□□□□ 0.49
VPS26A-204ENST00000467852 PDGFDQ9GZP0 370 aaPredicted RBP18.1■□□□□ 0.49
VPS26A-204ENST00000467852 KIF1BO60333 1816 aa18.09■□□□□ 0.49
VPS26A-204ENST00000467852 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
VPS26A-204ENST00000467852 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.48
VPS26A-204ENST00000467852 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
VPS26A-204ENST00000467852 ANO8Q9HCE9 1232 aaPredicted RBP18.07■□□□□ 0.48
VPS26A-204ENST00000467852 C11orf95C9JLR9 678 aaPredicted RBP18.06■□□□□ 0.48
VPS26A-204ENST00000467852 PLSCR1O15162 318 aa18.06■□□□□ 0.48
VPS26A-204ENST00000467852 CAPN15O75808 1086 aa18.05■□□□□ 0.48
VPS26A-204ENST00000467852 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
VPS26A-204ENST00000467852 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
VPS26A-204ENST00000467852 USP35Q9P2H5 1018 aa18.05■□□□□ 0.48
VPS26A-204ENST00000467852 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
VPS26A-204ENST00000467852 MTFR1LQ9H019 292 aa18.04■□□□□ 0.48
VPS26A-204ENST00000467852 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
VPS26A-204ENST00000467852 STK26Q9P289 416 aa18.04■□□□□ 0.48
VPS26A-204ENST00000467852 RGPD3A6NKT7 1758 aaPredicted RBP18.04■□□□□ 0.48
VPS26A-204ENST00000467852 RGPD4Q7Z3J3 1758 aa18.04■□□□□ 0.48
VPS26A-204ENST00000467852 BARGINQ6ZT62 677 aa18.03■□□□□ 0.48
VPS26A-204ENST00000467852 ARXQ96QS3 562 aa18.03■□□□□ 0.48
VPS26A-204ENST00000467852 NRXN1Q9ULB1 1477 aa18.02■□□□□ 0.48
VPS26A-204ENST00000467852 CLTCL1P53675 1640 aa18.02■□□□□ 0.48
VPS26A-204ENST00000467852 STK32BQ9NY57 414 aa18.01■□□□□ 0.47
VPS26A-204ENST00000467852 RPGRIP1LQ68CZ1 1315 aa18■□□□□ 0.47
VPS26A-204ENST00000467852 APLP2Q06481 763 aa18■□□□□ 0.47
VPS26A-204ENST00000467852 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
VPS26A-204ENST00000467852 MAP3K5Q99683 1374 aa18■□□□□ 0.47
VPS26A-204ENST00000467852 SGIP1Q9BQI5 828 aa17.99■□□□□ 0.47
VPS26A-204ENST00000467852 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
VPS26A-204ENST00000467852 TECPR2O15040 1411 aa17.98■□□□□ 0.47
VPS26A-204ENST00000467852 EVA1CP58658 441 aa17.98■□□□□ 0.47
VPS26A-204ENST00000467852 PLEKHH1Q9ULM0 1364 aa17.97■□□□□ 0.47
VPS26A-204ENST00000467852 SLC34A2O95436 690 aa17.97■□□□□ 0.47
VPS26A-204ENST00000467852 IFT172Q9UG01 1749 aa17.97■□□□□ 0.47
VPS26A-204ENST00000467852 PRELPP51888 382 aa17.96■□□□□ 0.47
VPS26A-204ENST00000467852 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
VPS26A-204ENST00000467852 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
VPS26A-204ENST00000467852 GPBP1L1Q9HC44 474 aaPredicted RBP17.96■□□□□ 0.47
VPS26A-204ENST00000467852 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
VPS26A-204ENST00000467852 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
VPS26A-204ENST00000467852 ABCC11Q96J66 1382 aa17.94■□□□□ 0.46
VPS26A-204ENST00000467852 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
VPS26A-204ENST00000467852 SBF2Q86WG5 1849 aa17.93■□□□□ 0.46
VPS26A-204ENST00000467852 ALS2Q96Q42 1657 aa17.93■□□□□ 0.46
VPS26A-204ENST00000467852 GPRASP1Q5JY77 1395 aa17.93■□□□□ 0.46
VPS26A-204ENST00000467852 TRPM3Q9HCF6 1732 aaPredicted RBP17.93■□□□□ 0.46
VPS26A-204ENST00000467852 PROM2Q8N271 834 aa17.93■□□□□ 0.46
VPS26A-204ENST00000467852 PPLO60437 1756 aa17.93■□□□□ 0.46
VPS26A-204ENST00000467852 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 OVOS2A0A0J9YW53 1432 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 OVOS2Q6IE36 1432 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 GRIN3BO60391 1043 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 COL13A1Q5TAT6 717 aaPredicted RBP17.91■□□□□ 0.46
VPS26A-204ENST00000467852 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
VPS26A-204ENST00000467852 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
VPS26A-204ENST00000467852 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
VPS26A-204ENST00000467852 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.46
VPS26A-204ENST00000467852 APLP1P51693 650 aa17.89■□□□□ 0.45
VPS26A-204ENST00000467852 TNS4Q8IZW8 715 aa17.89■□□□□ 0.45
VPS26A-204ENST00000467852 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
VPS26A-204ENST00000467852 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
VPS26A-204ENST00000467852 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
VPS26A-204ENST00000467852 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
VPS26A-204ENST00000467852 PARP4Q9UKK3 1724 aaKnown RBP17.87■□□□□ 0.45
VPS26A-204ENST00000467852 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
VPS26A-204ENST00000467852 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
VPS26A-204ENST00000467852 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
VPS26A-204ENST00000467852 PEAK1Q9H792 1746 aa17.85■□□□□ 0.45
VPS26A-204ENST00000467852 PCDH10Q9P2E7 1040 aa17.85■□□□□ 0.45
VPS26A-204ENST00000467852 DHX57Q6P158 1386 aaKnown RBP17.84■□□□□ 0.45
VPS26A-204ENST00000467852 DNAJC5GQ8N7S2 189 aa17.84■□□□□ 0.45
VPS26A-204ENST00000467852 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.45
VPS26A-204ENST00000467852 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
VPS26A-204ENST00000467852 POLD1P28340 1107 aa17.83■□□□□ 0.44
VPS26A-204ENST00000467852 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.44
VPS26A-204ENST00000467852 ZNF526Q8TF50 670 aaPredicted RBP17.83■□□□□ 0.44
VPS26A-204ENST00000467852 YTHDC2Q9H6S0 1430 aaKnown RBP17.82■□□□□ 0.44
VPS26A-204ENST00000467852 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
VPS26A-204ENST00000467852 DDB1Q16531 1140 aa17.81■□□□□ 0.44
VPS26A-204ENST00000467852 NGDNQ8NEJ9 315 aaKnown RBP17.8■□□□□ 0.44
VPS26A-204ENST00000467852 ATP7BP35670 1465 aa17.8■□□□□ 0.44
VPS26A-204ENST00000467852 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS26A-204ENST00000467852 SAFB2Q14151 953 aaKnown RBP eCLIP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms