RNA–Protein interactions for RNA: ENST00000467706.1

NOD1-207, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 905 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-207ENST00000467706 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
NOD1-207ENST00000467706 ESCO1Q5FWF5 840 aa16.48■□□□□ 0.23
NOD1-207ENST00000467706 CADPS2Q86UW7 1296 aa16.48■□□□□ 0.23
NOD1-207ENST00000467706 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
NOD1-207ENST00000467706 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
NOD1-207ENST00000467706 MST1RQ04912 1400 aa16.47■□□□□ 0.23
NOD1-207ENST00000467706 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
NOD1-207ENST00000467706 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
NOD1-207ENST00000467706 NME9Q86XW9 330 aa16.46■□□□□ 0.23
NOD1-207ENST00000467706 FAM9BQ8IZU0 186 aa16.46■□□□□ 0.23
NOD1-207ENST00000467706 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
NOD1-207ENST00000467706 COG3Q96JB2 828 aa16.44■□□□□ 0.22
NOD1-207ENST00000467706 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
NOD1-207ENST00000467706 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
NOD1-207ENST00000467706 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
NOD1-207ENST00000467706 PIK3C2AO00443 1686 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 PSME1Q06323 249 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
NOD1-207ENST00000467706 PAK3O75914 559 aaPredicted RBP16.39■□□□□ 0.21
NOD1-207ENST00000467706 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
NOD1-207ENST00000467706 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
NOD1-207ENST00000467706 USP54Q70EL1 1684 aa16.38■□□□□ 0.21
NOD1-207ENST00000467706 FOXO3O43524 673 aa16.38■□□□□ 0.21
NOD1-207ENST00000467706 MTHFSP49914 203 aa16.38■□□□□ 0.21
NOD1-207ENST00000467706 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
NOD1-207ENST00000467706 AATKQ6ZMQ8 1374 aa16.37■□□□□ 0.21
NOD1-207ENST00000467706 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
NOD1-207ENST00000467706 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
NOD1-207ENST00000467706 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
NOD1-207ENST00000467706 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
NOD1-207ENST00000467706 NLRP6P59044 892 aa16.35■□□□□ 0.21
NOD1-207ENST00000467706 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
NOD1-207ENST00000467706 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
NOD1-207ENST00000467706 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
NOD1-207ENST00000467706 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
NOD1-207ENST00000467706 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
NOD1-207ENST00000467706 MAP2P11137 1827 aaKnown RBP16.34■□□□□ 0.21
NOD1-207ENST00000467706 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
NOD1-207ENST00000467706 NPHP3Q7Z494 1330 aa16.34■□□□□ 0.21
NOD1-207ENST00000467706 BRINP3Q76B58 766 aa16.33■□□□□ 0.2
NOD1-207ENST00000467706 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
NOD1-207ENST00000467706 INSRP06213 1382 aa16.33■□□□□ 0.2
NOD1-207ENST00000467706 COL3A1P02461 1466 aaPredicted RBP16.33■□□□□ 0.2
NOD1-207ENST00000467706 FBLN1P23142 703 aa16.32■□□□□ 0.2
NOD1-207ENST00000467706 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
NOD1-207ENST00000467706 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
NOD1-207ENST00000467706 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
NOD1-207ENST00000467706 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
NOD1-207ENST00000467706 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
NOD1-207ENST00000467706 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 PXDNQ92626 1479 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 PNPLA6Q8IY17 1366 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 SOX12O15370 315 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
NOD1-207ENST00000467706 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
NOD1-207ENST00000467706 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
NOD1-207ENST00000467706 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
NOD1-207ENST00000467706 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
NOD1-207ENST00000467706 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
NOD1-207ENST00000467706 NHSL1Q5SYE7 1610 aa16.27■□□□□ 0.2
NOD1-207ENST00000467706 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
NOD1-207ENST00000467706 SLIT3O75094 1523 aa16.27■□□□□ 0.2
NOD1-207ENST00000467706 PEAK1Q9H792 1746 aa16.26■□□□□ 0.19
NOD1-207ENST00000467706 KCNH5Q8NCM2 988 aa16.26■□□□□ 0.19
NOD1-207ENST00000467706 NFAT5O94916 1531 aa16.25■□□□□ 0.19
NOD1-207ENST00000467706 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
NOD1-207ENST00000467706 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
NOD1-207ENST00000467706 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 USP19O94966 1318 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 SPATA31A3Q5VYP0 1347 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 U2SURPO15042 1029 aaKnown RBP16.24■□□□□ 0.19
NOD1-207ENST00000467706 U2AF1L5P0DN76 240 aaPredicted RBP16.24■□□□□ 0.19
NOD1-207ENST00000467706 U2AF1Q01081 240 aaKnown RBP eCLIP16.24■□□□□ 0.19
NOD1-207ENST00000467706 ARHGEF10O15013 1369 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 FLT4P35916 1363 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 KIF24Q5T7B8 1368 aa16.24■□□□□ 0.19
NOD1-207ENST00000467706 LTN1O94822 1766 aa16.23■□□□□ 0.19
NOD1-207ENST00000467706 SOS2Q07890 1332 aaPredicted RBP16.23■□□□□ 0.19
NOD1-207ENST00000467706 AMPHP49418 695 aa16.23■□□□□ 0.19
NOD1-207ENST00000467706 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
NOD1-207ENST00000467706 RTL1A6NKG5 1358 aa16.22■□□□□ 0.19
NOD1-207ENST00000467706 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.19
NOD1-207ENST00000467706 PHRF1Q9P1Y6 1649 aaKnown RBP16.21■□□□□ 0.19
NOD1-207ENST00000467706 PLEKHG5O94827 1062 aa16.21■□□□□ 0.19
NOD1-207ENST00000467706 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
NOD1-207ENST00000467706 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
NOD1-207ENST00000467706 GCP02774 474 aa16.2■□□□□ 0.18
NOD1-207ENST00000467706 IL13P35225 146 aa16.2■□□□□ 0.18
NOD1-207ENST00000467706 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
NOD1-207ENST00000467706 IQSEC2Q5JU85 1478 aa16.2■□□□□ 0.18
NOD1-207ENST00000467706 CRYBG1Q9Y4K1 1723 aa16.19■□□□□ 0.18
NOD1-207ENST00000467706 TOM1O60784 492 aa16.19■□□□□ 0.18
NOD1-207ENST00000467706 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
NOD1-207ENST00000467706 ZBTB7CA1YPR0 619 aa16.18■□□□□ 0.18
NOD1-207ENST00000467706 HOXC9P31274 260 aa16.18■□□□□ 0.18
NOD1-207ENST00000467706 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms