RNA–Protein interactions for RNA: ENST00000467673.5

MACF1-211, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-211ENST00000467673 CABP1Q9NZU7 370 aa30.57■■■□□ 2.48
MACF1-211ENST00000467673 PAK3O75914 559 aaPredicted RBP30.56■■■□□ 2.48
MACF1-211ENST00000467673 SLIT2O94813 1529 aa30.55■■■□□ 2.48
MACF1-211ENST00000467673 PLEKHG5O94827 1062 aa30.54■■■□□ 2.48
MACF1-211ENST00000467673 RBM6P78332 1123 aaKnown RBP30.54■■■□□ 2.48
MACF1-211ENST00000467673 CDK12Q9NYV4 1490 aaPredicted RBP30.53■■■□□ 2.48
MACF1-211ENST00000467673 ATRNO75882 1429 aa30.53■■■□□ 2.48
MACF1-211ENST00000467673 CRYBG1Q9Y4K1 1723 aa30.53■■■□□ 2.48
MACF1-211ENST00000467673 TRPC5Q9UL62 973 aaPredicted RBP30.52■■■□□ 2.48
MACF1-211ENST00000467673 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
MACF1-211ENST00000467673 FAM83GA6ND36 823 aa30.49■■■□□ 2.47
MACF1-211ENST00000467673 TESK2Q96S53 571 aa30.48■■■□□ 2.47
MACF1-211ENST00000467673 BRD4O60885 1362 aaPredicted RBP30.48■■■□□ 2.47
MACF1-211ENST00000467673 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
MACF1-211ENST00000467673 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.47■■■□□ 2.47
MACF1-211ENST00000467673 USP6P35125 1406 aa30.47■■■□□ 2.47
MACF1-211ENST00000467673 SSH2Q76I76 1423 aa30.47■■■□□ 2.47
MACF1-211ENST00000467673 ATAD2Q6PL18 1390 aa30.46■■■□□ 2.47
MACF1-211ENST00000467673 ST20-MTHFSA0A0A6YYL1 179 aa30.46■■■□□ 2.47
MACF1-211ENST00000467673 CCER1Q8TC90 406 aaPredicted RBP30.45■■■□□ 2.47
MACF1-211ENST00000467673 NUTM2GQ5VZR2 741 aa30.44■■■□□ 2.46
MACF1-211ENST00000467673 RGS12O14924 1447 aa30.43■■■□□ 2.46
MACF1-211ENST00000467673 ABTB2Q8N961 1025 aa30.43■■■□□ 2.46
MACF1-211ENST00000467673 CPSF1Q10570 1443 aaKnown RBP30.42■■■□□ 2.46
MACF1-211ENST00000467673 PLCH1Q4KWH8 1693 aa30.42■■■□□ 2.46
MACF1-211ENST00000467673 GJD4Q96KN9 370 aaPredicted RBP30.41■■■□□ 2.46
MACF1-211ENST00000467673 PUS7Q96PZ0 661 aaKnown RBP30.41■■■□□ 2.46
MACF1-211ENST00000467673 ZNF692Q9BU19 519 aaPredicted RBP30.41■■■□□ 2.46
MACF1-211ENST00000467673 NWD2Q9ULI1 1742 aa30.41■■■□□ 2.46
MACF1-211ENST00000467673 USP19O94966 1318 aa30.4■■■□□ 2.46
MACF1-211ENST00000467673 PHRF1Q9P1Y6 1649 aaKnown RBP30.4■■■□□ 2.46
MACF1-211ENST00000467673 AKAP12Q02952 1782 aa30.38■■■□□ 2.45
MACF1-211ENST00000467673 USP47Q96K76 1375 aa30.37■■■□□ 2.45
MACF1-211ENST00000467673 COL14A1Q05707 1796 aaKnown RBP30.36■■■□□ 2.45
MACF1-211ENST00000467673 VPS72Q15906 364 aa30.36■■■□□ 2.45
MACF1-211ENST00000467673 NLRP13Q86W25 1043 aa30.36■■■□□ 2.45
MACF1-211ENST00000467673 CD163L1Q9NR16 1453 aa30.35■■■□□ 2.45
MACF1-211ENST00000467673 GLI3P10071 1580 aa30.35■■■□□ 2.45
MACF1-211ENST00000467673 KIAA0232Q92628 1395 aa30.34■■■□□ 2.45
MACF1-211ENST00000467673 TTC21BQ7Z4L5 1316 aa30.34■■■□□ 2.45
MACF1-211ENST00000467673 BTG4Q9NY30 223 aa30.34■■■□□ 2.45
MACF1-211ENST00000467673 SLC24A1O60721 1099 aa30.33■■■□□ 2.45
MACF1-211ENST00000467673 SLC12A5Q9H2X9 1139 aa30.33■■■□□ 2.45
MACF1-211ENST00000467673 NRAPQ86VF7 1730 aa30.33■■■□□ 2.45
MACF1-211ENST00000467673 NRKQ7Z2Y5 1582 aa30.32■■■□□ 2.45
MACF1-211ENST00000467673 ZC3H6P61129 1189 aaKnown RBP30.32■■■□□ 2.44
MACF1-211ENST00000467673 PRDM11Q9NQV5 511 aa30.32■■■□□ 2.44
MACF1-211ENST00000467673 PIK3C2AO00443 1686 aa30.31■■■□□ 2.44
MACF1-211ENST00000467673 GCP02774 474 aa30.31■■■□□ 2.44
MACF1-211ENST00000467673 KTN1Q86UP2 1357 aaKnown RBP30.3■■■□□ 2.44
MACF1-211ENST00000467673 NLRP6P59044 892 aa30.3■■■□□ 2.44
MACF1-211ENST00000467673 CPDO75976 1380 aa30.29■■■□□ 2.44
MACF1-211ENST00000467673 MON2Q7Z3U7 1717 aa30.29■■■□□ 2.44
MACF1-211ENST00000467673 CHRNA2Q15822 529 aa30.28■■■□□ 2.44
MACF1-211ENST00000467673 TMC1Q8TDI8 760 aa30.28■■■□□ 2.44
MACF1-211ENST00000467673 TTC21AQ8NDW8 1320 aa30.27■■■□□ 2.44
MACF1-211ENST00000467673 ONECUT3O60422 494 aaPredicted RBP30.27■■■□□ 2.44
MACF1-211ENST00000467673 UPF1Q92900 1129 aaKnown RBP eCLIP30.27■■■□□ 2.44
MACF1-211ENST00000467673 SLIT3O75094 1523 aa30.27■■■□□ 2.44
MACF1-211ENST00000467673 EP400Q96L91 3159 aa30.24■■■□□ 2.43
MACF1-211ENST00000467673 TMF1P82094 1093 aa30.22■■■□□ 2.43
MACF1-211ENST00000467673 A0A1W2PP64 1363 aa30.21■■■□□ 2.43
MACF1-211ENST00000467673 NINLQ9Y2I6 1382 aa30.21■■■□□ 2.43
MACF1-211ENST00000467673 HDGFL2Q7Z4V5 671 aaPredicted RBP30.21■■■□□ 2.43
MACF1-211ENST00000467673 SPATA31A5Q5VU36 1347 aa30.21■■■□□ 2.43
MACF1-211ENST00000467673 SPATA31A7Q8IWB4 1347 aa30.21■■■□□ 2.43
MACF1-211ENST00000467673 LMO7Q8WWI1 1683 aa30.2■■■□□ 2.43
MACF1-211ENST00000467673 CAMTA1Q9Y6Y1 1673 aa30.2■■■□□ 2.43
MACF1-211ENST00000467673 TERF2IPQ9NYB0 399 aa30.2■■■□□ 2.43
MACF1-211ENST00000467673 CCDC9Q9Y3X0 531 aaKnown RBP30.2■■■□□ 2.43
MACF1-211ENST00000467673 USP31Q70CQ4 1352 aa30.18■■■□□ 2.42
MACF1-211ENST00000467673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.18■■■□□ 2.423e-6■■■■□ 19.7
MACF1-211ENST00000467673 ZRANB1Q9UGI0 708 aa30.18■■■□□ 2.42
MACF1-211ENST00000467673 EDC4Q6P2E9 1401 aaKnown RBP30.17■■■□□ 2.42
MACF1-211ENST00000467673 SEPT12Q8IYM1 358 aa30.17■■■□□ 2.42
MACF1-211ENST00000467673 NME9Q86XW9 330 aa30.15■■■□□ 2.42
MACF1-211ENST00000467673 USP54Q70EL1 1684 aa30.14■■■□□ 2.42
MACF1-211ENST00000467673 BRWD3Q6RI45 1802 aa30.14■■■□□ 2.42
MACF1-211ENST00000467673 SPATA31A1Q5TZJ5 1347 aa30.14■■■□□ 2.42
MACF1-211ENST00000467673 AATKQ6ZMQ8 1374 aa30.14■■■□□ 2.41
MACF1-211ENST00000467673 COL18A1P39060 1754 aa30.13■■■□□ 2.41
MACF1-211ENST00000467673 ARHGEF25Q86VW2 580 aa30.13■■■□□ 2.41
MACF1-211ENST00000467673 KCNH5Q8NCM2 988 aa30.13■■■□□ 2.41
MACF1-211ENST00000467673 STRN4Q9NRL3 753 aa30.13■■■□□ 2.41
MACF1-211ENST00000467673 FAM98CQ17RN3 349 aaKnown RBP30.12■■■□□ 2.41
MACF1-211ENST00000467673 NFAT5O94916 1531 aa30.12■■■□□ 2.41
MACF1-211ENST00000467673 CDCA8Q53HL2 280 aa30.1■■■□□ 2.41
MACF1-211ENST00000467673 ANKRD36BQ8N2N9 1353 aa30.1■■■□□ 2.41
MACF1-211ENST00000467673 EVA1CP58658 441 aa30.09■■■□□ 2.41
MACF1-211ENST00000467673 LARP1Q6PKG0 1096 aaKnown RBP30.09■■■□□ 2.41
MACF1-211ENST00000467673 AXIN2Q9Y2T1 843 aa30.09■■■□□ 2.41
MACF1-211ENST00000467673 COL5A2P05997 1499 aaPredicted RBP30.08■■■□□ 2.41
MACF1-211ENST00000467673 HSPA5P11021 654 aaKnown RBP30.06■■■□□ 2.4
MACF1-211ENST00000467673 EIF4G2P78344 907 aaKnown RBP eCLIP30.06■■■□□ 2.42e-6■■■■■ 26.9
MACF1-211ENST00000467673 OVOS2A0A0J9YW53 1432 aa30.05■■■□□ 2.4
MACF1-211ENST00000467673 OVOS2Q6IE36 1432 aa30.05■■■□□ 2.4
MACF1-211ENST00000467673 THSD7AQ9UPZ6 1657 aa30.05■■■□□ 2.4
MACF1-211ENST00000467673 SOX12O15370 315 aa30.05■■■□□ 2.4
MACF1-211ENST00000467673 ZBTB7CA1YPR0 619 aa30.04■■■□□ 2.4
MACF1-211ENST00000467673 KRT27Q7Z3Y8 459 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms