RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 FHDC1Q9C0D6 1143 aaPredicted RBP9.92□□□□□ -0.82
PTPRE-206ENST00000467366 IFT172Q9UG01 1749 aa9.92□□□□□ -0.82
PTPRE-206ENST00000467366 CRYBG1Q9Y4K1 1723 aa9.92□□□□□ -0.82
PTPRE-206ENST00000467366 RRBP1Q9P2E9 1410 aaKnown RBP9.91□□□□□ -0.82
PTPRE-206ENST00000467366 ARHGEF10O15013 1369 aa9.91□□□□□ -0.82
PTPRE-206ENST00000467366 ZBTB7AO95365 584 aa9.91□□□□□ -0.82
PTPRE-206ENST00000467366 ANO8Q9HCE9 1232 aaPredicted RBP9.91□□□□□ -0.82
PTPRE-206ENST00000467366 TRPM3Q9HCF6 1732 aaPredicted RBP9.9□□□□□ -0.82
PTPRE-206ENST00000467366 PLEKHH1Q9ULM0 1364 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 VGFO15240 615 aaPredicted RBP9.9□□□□□ -0.82
PTPRE-206ENST00000467366 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 ATF5Q9Y2D1 282 aaPredicted RBP9.9□□□□□ -0.82
PTPRE-206ENST00000467366 DLC1Q96QB1 1528 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 RGPD3A6NKT7 1758 aaPredicted RBP9.9□□□□□ -0.82
PTPRE-206ENST00000467366 PPLO60437 1756 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 RGPD4Q7Z3J3 1758 aa9.9□□□□□ -0.82
PTPRE-206ENST00000467366 NRXN1Q9ULB1 1477 aa9.9□□□□□ -0.83
PTPRE-206ENST00000467366 ALS2Q96Q42 1657 aa9.9□□□□□ -0.83
PTPRE-206ENST00000467366 KNDC1Q76NI1 1749 aa9.88□□□□□ -0.83
PTPRE-206ENST00000467366 FAM50AQ14320 339 aaKnown RBP9.88□□□□□ -0.83
PTPRE-206ENST00000467366 TECPR2O15040 1411 aa9.88□□□□□ -0.83
PTPRE-206ENST00000467366 PDE3BQ13370 1112 aa9.87□□□□□ -0.83
PTPRE-206ENST00000467366 STK26Q9P289 416 aa9.87□□□□□ -0.83
PTPRE-206ENST00000467366 SBF2Q86WG5 1849 aa9.86□□□□□ -0.83
PTPRE-206ENST00000467366 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
PTPRE-206ENST00000467366 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
PTPRE-206ENST00000467366 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
PTPRE-206ENST00000467366 PLSCR1O15162 318 aa9.84□□□□□ -0.83
PTPRE-206ENST00000467366 PMFBP1Q8TBY8 1022 aa9.84□□□□□ -0.83
PTPRE-206ENST00000467366 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
PTPRE-206ENST00000467366 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
PTPRE-206ENST00000467366 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
PTPRE-206ENST00000467366 PARP4Q9UKK3 1724 aaKnown RBP9.83□□□□□ -0.84
PTPRE-206ENST00000467366 HSPA6P17066 643 aa9.83□□□□□ -0.84
PTPRE-206ENST00000467366 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
PTPRE-206ENST00000467366 GPR162Q16538 588 aa9.83□□□□□ -0.84
PTPRE-206ENST00000467366 BARGINQ6ZT62 677 aa9.83□□□□□ -0.84
PTPRE-206ENST00000467366 TMEM132EQ6IEE7 984 aa9.82□□□□□ -0.84
PTPRE-206ENST00000467366 PROM2Q8N271 834 aa9.82□□□□□ -0.84
PTPRE-206ENST00000467366 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
PTPRE-206ENST00000467366 ROCK1Q13464 1354 aa9.82□□□□□ -0.84
PTPRE-206ENST00000467366 ABCC11Q96J66 1382 aa9.82□□□□□ -0.84
PTPRE-206ENST00000467366 RPGRIP1LQ68CZ1 1315 aa9.82□□□□□ -0.84
PTPRE-206ENST00000467366 KIAA0232Q92628 1395 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 MAP3K5Q99683 1374 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 CAPN15O75808 1086 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 PTF1AQ7RTS3 328 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 ARXQ96QS3 562 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 MTFR1LQ9H019 292 aa9.81□□□□□ -0.84
PTPRE-206ENST00000467366 SSH2Q76I76 1423 aa9.8□□□□□ -0.84
PTPRE-206ENST00000467366 ADGRF5Q8IZF2 1346 aa9.8□□□□□ -0.84
PTPRE-206ENST00000467366 SLC15A2Q16348 729 aa9.79□□□□□ -0.84
PTPRE-206ENST00000467366 OVOS2A0A0G2JMS6 1433 aa9.79□□□□□ -0.84
PTPRE-206ENST00000467366 OVOS2A0A0J9YW53 1432 aa9.79□□□□□ -0.84
PTPRE-206ENST00000467366 OVOS2Q6IE36 1432 aa9.79□□□□□ -0.84
PTPRE-206ENST00000467366 ZC3H6P61129 1189 aaKnown RBP9.78□□□□□ -0.84
PTPRE-206ENST00000467366 LARP1Q6PKG0 1096 aaKnown RBP9.78□□□□□ -0.84
PTPRE-206ENST00000467366 STK32BQ9NY57 414 aa9.78□□□□□ -0.84
PTPRE-206ENST00000467366 YTHDC2Q9H6S0 1430 aaKnown RBP9.78□□□□□ -0.84
PTPRE-206ENST00000467366 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
PTPRE-206ENST00000467366 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
PTPRE-206ENST00000467366 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.84
PTPRE-206ENST00000467366 TCP11L2Q8N4U5 519 aa9.77□□□□□ -0.85
PTPRE-206ENST00000467366 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
PTPRE-206ENST00000467366 ACIN1Q9UKV3 1341 aaKnown RBP9.77□□□□□ -0.85
PTPRE-206ENST00000467366 GPRASP1Q5JY77 1395 aa9.76□□□□□ -0.85
PTPRE-206ENST00000467366 ANKARQ7Z5J8 1434 aa9.76□□□□□ -0.85
PTPRE-206ENST00000467366 EVA1CP58658 441 aa9.76□□□□□ -0.85
PTPRE-206ENST00000467366 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
PTPRE-206ENST00000467366 ATP7BP35670 1465 aa9.76□□□□□ -0.85
PTPRE-206ENST00000467366 C11orf95C9JLR9 678 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-206ENST00000467366 PAK3O75914 559 aaPredicted RBP9.75□□□□□ -0.85
PTPRE-206ENST00000467366 SAFB2Q14151 953 aaKnown RBP eCLIP9.75□□□□□ -0.85
PTPRE-206ENST00000467366 TXNRD1Q16881 649 aa9.75□□□□□ -0.85
PTPRE-206ENST00000467366 SIRT1Q96EB6 747 aa9.75□□□□□ -0.85
PTPRE-206ENST00000467366 COL24A1Q17RW2 1714 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 AKAP12Q02952 1782 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 SLC34A2O95436 690 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 KLHL34Q8N239 644 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
PTPRE-206ENST00000467366 THRAP3Q9Y2W1 955 aaKnown RBP9.74□□□□□ -0.85
PTPRE-206ENST00000467366 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
PTPRE-206ENST00000467366 TOPAZ1Q8N9V7 1692 aa9.74□□□□□ -0.85
PTPRE-206ENST00000467366 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTPRE-206ENST00000467366 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
PTPRE-206ENST00000467366 NLGN2Q8NFZ4 835 aa9.73□□□□□ -0.85
PTPRE-206ENST00000467366 PRR36Q9H6K5 1346 aa9.73□□□□□ -0.85
PTPRE-206ENST00000467366 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
PTPRE-206ENST00000467366 WNK3Q9BYP7 1800 aa9.72□□□□□ -0.85
PTPRE-206ENST00000467366 ITGAEP38570 1179 aa9.72□□□□□ -0.85
PTPRE-206ENST00000467366 PRELPP51888 382 aa9.72□□□□□ -0.85
PTPRE-206ENST00000467366 NCBP3Q53F19 620 aaKnown RBP9.72□□□□□ -0.85
PTPRE-206ENST00000467366 ZNF526Q8TF50 670 aaPredicted RBP9.72□□□□□ -0.85
PTPRE-206ENST00000467366 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.86
PTPRE-206ENST00000467366 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
PTPRE-206ENST00000467366 PRAM1Q96QH2 718 aa9.71□□□□□ -0.86
PTPRE-206ENST00000467366 COL5A2P05997 1499 aaPredicted RBP9.71□□□□□ -0.86
PTPRE-206ENST00000467366 DDB1Q16531 1140 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms