RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 ZSWIM6Q9HCJ5 1215 aa6.91□□□□□ -1.3
MSH2-205ENST00000467323 MKRN1Q9UHC7 482 aaKnown RBP6.91□□□□□ -1.3
MSH2-205ENST00000467323 ANKRD33BA6NCL7 494 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 HAX1O00165 279 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 SMAPO00193 183 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 FBXO45P0C2W1 286 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 RASA1P20936 1047 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 SERPINB4P48594 390 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 SWI5Q1ZZU3 235 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 CRTC2Q53ET0 693 aaPredicted RBP6.9□□□□□ -1.3
MSH2-205ENST00000467323 ARSIQ5FYB1 569 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 DESI1Q6ICB0 168 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 PELP1Q8IZL8 1130 aaKnown RBP6.9□□□□□ -1.3
MSH2-205ENST00000467323 DCBLD2Q96PD2 775 aa6.9□□□□□ -1.3
MSH2-205ENST00000467323 POTEFA5A3E0 1075 aa6.89□□□□□ -1.31
MSH2-205ENST00000467323 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
MSH2-205ENST00000467323 FAM69CQ0P6D2 419 aa6.89□□□□□ -1.31
MSH2-205ENST00000467323 PTK7Q13308 1070 aa6.89□□□□□ -1.31
MSH2-205ENST00000467323 RETREG3Q86VR2 466 aa6.89□□□□□ -1.31
MSH2-205ENST00000467323 NPAS4Q8IUM7 802 aa6.89□□□□□ -1.31
MSH2-205ENST00000467323 ZC3H4Q9UPT8 1303 aaKnown RBP6.88□□□□□ -1.31
MSH2-205ENST00000467323 ATP6V1AP38606 617 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 ZC3H6P61129 1189 aaKnown RBP6.88□□□□□ -1.31
MSH2-205ENST00000467323 FUT2Q10981 343 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 SLFNL1Q499Z3 407 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 NOM1Q5C9Z4 860 aaKnown RBP6.88□□□□□ -1.31
MSH2-205ENST00000467323 SWT1Q5T5J6 900 aaKnown RBP6.88□□□□□ -1.31
MSH2-205ENST00000467323 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 C1orf216Q8TAB5 229 aa6.88□□□□□ -1.31
MSH2-205ENST00000467323 MCCD1P59942 119 aaPredicted RBP6.87□□□□□ -1.31
MSH2-205ENST00000467323 KHSRPQ92945 711 aaKnown RBP eCLIP6.87□□□□□ -1.31
MSH2-205ENST00000467323 EGFL7Q9UHF1 273 aa6.87□□□□□ -1.31
MSH2-205ENST00000467323 METRNQ9UJH8 293 aa6.87□□□□□ -1.31
MSH2-205ENST00000467323 LHX6Q9UPM6 363 aa6.87□□□□□ -1.31
MSH2-205ENST00000467323 NCOA4Q13772 614 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 SF3A1Q15459 793 aaKnown RBP6.86□□□□□ -1.31
MSH2-205ENST00000467323 Q3C1V9 767 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 RNF135Q8IUD6 432 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 FAM174AQ8TBP5 190 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 SYMPKQ92797 1274 aaKnown RBP6.86□□□□□ -1.31
MSH2-205ENST00000467323 KCNH8Q96L42 1107 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 SLAIN2Q9P270 581 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
MSH2-205ENST00000467323 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
MSH2-205ENST00000467323 UBXN4Q92575 508 aa6.85□□□□□ -1.31
MSH2-205ENST00000467323 CFHP08603 1231 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 DPYDQ12882 1025 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 EML3Q32P44 896 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 PROX2Q3B8N5 592 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 GPR153Q6NV75 609 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 KIAA1468Q9P260 1216 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
MSH2-205ENST00000467323 ZSCAN29Q8IWY8 852 aaPredicted RBP6.83□□□□□ -1.32
MSH2-205ENST00000467323 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
MSH2-205ENST00000467323 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
MSH2-205ENST00000467323 ABL1P00519 1130 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 MAPK1P28482 360 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 EVX2Q03828 476 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 COL19A1Q14993 1142 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 KMT5BQ4FZB7 885 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 FBXO33Q7Z6M2 555 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 GLYCTKQ8IVS8 523 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 OGFOD1Q8N543 542 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 GPSM3Q9Y4H4 160 aa6.82□□□□□ -1.32
MSH2-205ENST00000467323 H3BRB1 525 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 NAALADL2Q58DX5 795 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 SPATA32Q96LK8 384 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 ASB16Q96NS5 453 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 TUT1Q9H6E5 874 aaKnown RBP6.81□□□□□ -1.32
MSH2-205ENST00000467323 DNAAF2Q9NVR5 837 aaKnown RBP6.81□□□□□ -1.32
MSH2-205ENST00000467323 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
MSH2-205ENST00000467323 ICMTO60725 284 aa6.8□□□□□ -1.32
MSH2-205ENST00000467323 HOXB3P14651 431 aaPredicted RBP6.8□□□□□ -1.32
MSH2-205ENST00000467323 PTK2Q05397 1052 aa6.8□□□□□ -1.32
MSH2-205ENST00000467323 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
MSH2-205ENST00000467323 ZNF594Q96JF6 807 aaPredicted RBP6.8□□□□□ -1.32
MSH2-205ENST00000467323 KCNK17Q96T54 332 aa6.8□□□□□ -1.32
MSH2-205ENST00000467323 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
MSH2-205ENST00000467323 PPM1GO15355 546 aaPredicted RBP6.79□□□□□ -1.32
MSH2-205ENST00000467323 C21orf2O43822 256 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 GABBR2O75899 941 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 RECKO95980 971 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 NCLP19338 710 aaKnown RBP6.79□□□□□ -1.32
MSH2-205ENST00000467323 PHTF2Q8N3S3 785 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 ARMC2Q8NEN0 867 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 GPKOWQ92917 476 aaPredicted RBP eCLIP6.79□□□□□ -1.32
MSH2-205ENST00000467323 CXXC1Q9P0U4 656 aaPredicted RBP6.79□□□□□ -1.32
MSH2-205ENST00000467323 PPP1R1BQ9UD71 204 aaPredicted RBP6.79□□□□□ -1.32
MSH2-205ENST00000467323 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
MSH2-205ENST00000467323 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
MSH2-205ENST00000467323 PRMT3O60678 531 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
MSH2-205ENST00000467323 SCNN1AP37088 669 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 SEC13P55735 322 aa6.78□□□□□ -1.32
MSH2-205ENST00000467323 CLDN10P78369 228 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms