RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 RAB3GAP1Q15042 981 aa19.55■□□□□ 0.72
CHD1L-205ENST00000467213 NUCB1Q02818 461 aa19.54■□□□□ 0.72
CHD1L-205ENST00000467213 ZBTB40Q9NUA8 1239 aa19.54■□□□□ 0.72
CHD1L-205ENST00000467213 CDC42BPGQ6DT37 1551 aa19.53■□□□□ 0.72
CHD1L-205ENST00000467213 HSP90AA1P07900 732 aaKnown RBP19.53■□□□□ 0.72
CHD1L-205ENST00000467213 TRIM27P14373 513 aa19.53■□□□□ 0.72
CHD1L-205ENST00000467213 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
CHD1L-205ENST00000467213 ALDH1L2Q3SY69 923 aa19.53■□□□□ 0.72
CHD1L-205ENST00000467213 CHMP4BQ9H444 224 aaKnown RBP19.53■□□□□ 0.72
CHD1L-205ENST00000467213 RRP7AQ9Y3A4 280 aaKnown RBP19.53■□□□□ 0.72
CHD1L-205ENST00000467213 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
CHD1L-205ENST00000467213 BMP2KLQ5H9B9 411 aa19.52■□□□□ 0.72
CHD1L-205ENST00000467213 GLI2P10070 1586 aa19.52■□□□□ 0.72
CHD1L-205ENST00000467213 IPO8O15397 1037 aaKnown RBP19.52■□□□□ 0.72
CHD1L-205ENST00000467213 PLEKHF1Q96S99 279 aa19.52■□□□□ 0.72
CHD1L-205ENST00000467213 KIDINS220Q9ULH0 1771 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 AFAP1Q8N556 730 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 TPM2P07951 284 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 CD109Q6YHK3 1445 aa19.51■□□□□ 0.71
CHD1L-205ENST00000467213 NAP1L5Q96NT1 182 aaPredicted RBP19.5■□□□□ 0.71
CHD1L-205ENST00000467213 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
CHD1L-205ENST00000467213 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 SMC4Q9NTJ3 1288 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 PPP1R9BQ96SB3 815 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 TERF1P54274 439 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
CHD1L-205ENST00000467213 BCL2L13Q9BXK5 485 aa19.49■□□□□ 0.71
CHD1L-205ENST00000467213 CLTCQ00610 1675 aaKnown RBP19.48■□□□□ 0.71
CHD1L-205ENST00000467213 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
CHD1L-205ENST00000467213 KIF3BO15066 747 aa19.48■□□□□ 0.71
CHD1L-205ENST00000467213 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
CHD1L-205ENST00000467213 TMPOP42166 694 aaKnown RBP19.47■□□□□ 0.71
CHD1L-205ENST00000467213 SSH1Q8WYL5 1049 aa19.47■□□□□ 0.71
CHD1L-205ENST00000467213 GZF1Q9H116 711 aaPredicted RBP19.47■□□□□ 0.71
CHD1L-205ENST00000467213 CCDC173Q0VFZ6 552 aa19.46■□□□□ 0.71
CHD1L-205ENST00000467213 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
CHD1L-205ENST00000467213 TRIM35Q9UPQ4 493 aa19.46■□□□□ 0.71
CHD1L-205ENST00000467213 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
CHD1L-205ENST00000467213 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
CHD1L-205ENST00000467213 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■■□□□ 13.9
CHD1L-205ENST00000467213 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
CHD1L-205ENST00000467213 TRIM44Q96DX7 344 aaPredicted RBP19.45■□□□□ 0.7
CHD1L-205ENST00000467213 HECW2Q9P2P5 1572 aa19.45■□□□□ 0.7
CHD1L-205ENST00000467213 PNPLA6Q8IY17 1366 aa19.44■□□□□ 0.7
CHD1L-205ENST00000467213 HS1BP3Q53T59 392 aa19.44■□□□□ 0.7
CHD1L-205ENST00000467213 ITPRIPQ8IWB1 547 aa19.44■□□□□ 0.7
CHD1L-205ENST00000467213 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
CHD1L-205ENST00000467213 KIF2CQ99661 725 aa19.44■□□□□ 0.7
CHD1L-205ENST00000467213 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
CHD1L-205ENST00000467213 PTCH1Q13635 1447 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 CAMSAP1Q5T5Y3 1602 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
CHD1L-205ENST00000467213 TMEM57Q8N5G2 664 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 SPRYD3Q8NCJ5 442 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
CHD1L-205ENST00000467213 ERBB4Q15303 1308 aa19.41■□□□□ 0.7
CHD1L-205ENST00000467213 K7ELQ4 463 aaPredicted RBP19.41■□□□□ 0.7
CHD1L-205ENST00000467213 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
CHD1L-205ENST00000467213 KLHL40Q2TBA0 621 aa19.41■□□□□ 0.7
CHD1L-205ENST00000467213 NPATQ14207 1427 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 GOLGA6L22H0YM25 854 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 KIF24Q5T7B8 1368 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 YEATS2Q9ULM3 1422 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 NEXMIFQ5QGS0 1516 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 ABCC3O15438 1527 aa19.4■□□□□ 0.7
CHD1L-205ENST00000467213 TRAK1Q9UPV9 953 aa19.39■□□□□ 0.7
CHD1L-205ENST00000467213 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
CHD1L-205ENST00000467213 TSR2Q969E8 191 aaKnown RBP19.38■□□□□ 0.69
CHD1L-205ENST00000467213 TNNT2P45379 298 aaPredicted RBP19.38■□□□□ 0.69
CHD1L-205ENST00000467213 ZNF445P59923 1031 aa19.38■□□□□ 0.69
CHD1L-205ENST00000467213 KIF20BQ96Q89 1820 aa19.38■□□□□ 0.69
CHD1L-205ENST00000467213 ZSCAN30Q86W11 494 aa19.37■□□□□ 0.69
CHD1L-205ENST00000467213 ATAD2Q6PL18 1390 aa19.36■□□□□ 0.69
CHD1L-205ENST00000467213 PDCL3Q9H2J4 239 aa19.36■□□□□ 0.69
CHD1L-205ENST00000467213 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
CHD1L-205ENST00000467213 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
CHD1L-205ENST00000467213 A0A1W2PP64 1363 aa19.34■□□□□ 0.69
CHD1L-205ENST00000467213 OFD1O75665 1012 aa19.34■□□□□ 0.69
CHD1L-205ENST00000467213 ANP32BQ92688 251 aaKnown RBP19.34■□□□□ 0.69
CHD1L-205ENST00000467213 FAM135BQ49AJ0 1406 aa19.33■□□□□ 0.69
CHD1L-205ENST00000467213 FCHSD2O94868 740 aa19.33■□□□□ 0.68
CHD1L-205ENST00000467213 NUCB2P80303 420 aa19.33■□□□□ 0.68
CHD1L-205ENST00000467213 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
CHD1L-205ENST00000467213 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
CHD1L-205ENST00000467213 NASPP49321 788 aaPredicted RBP19.32■□□□□ 0.68
CHD1L-205ENST00000467213 RABEP1Q15276 862 aa19.32■□□□□ 0.68
CHD1L-205ENST00000467213 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.32■□□□□ 0.68
CHD1L-205ENST00000467213 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
CHD1L-205ENST00000467213 TBC1D9Q6ZT07 1266 aa19.32■□□□□ 0.68
CHD1L-205ENST00000467213 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
CHD1L-205ENST00000467213 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
CHD1L-205ENST00000467213 CDC45O75419 566 aa19.31■□□□□ 0.68
CHD1L-205ENST00000467213 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
CHD1L-205ENST00000467213 LRRC7Q96NW7 1537 aa19.31■□□□□ 0.68
CHD1L-205ENST00000467213 ABCC4O15439 1325 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms