RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IL21Q9HBE4 155 aa7.42□□□□□ -1.22
VPS13A-209ENST00000467124 MYT1LQ9UL68 1186 aa7.42□□□□□ -1.22
VPS13A-209ENST00000467124 ZBTB7CA1YPR0 619 aa7.41□□□□□ -1.22
VPS13A-209ENST00000467124 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
VPS13A-209ENST00000467124 CDCA8Q53HL2 280 aa7.41□□□□□ -1.22
VPS13A-209ENST00000467124 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
VPS13A-209ENST00000467124 MTRQ99707 1265 aa7.41□□□□□ -1.22
VPS13A-209ENST00000467124 COPS2P61201 443 aa7.4□□□□□ -1.22
VPS13A-209ENST00000467124 FKBPLQ9UIM3 349 aa7.4□□□□□ -1.22
VPS13A-209ENST00000467124 GPSM3Q9Y4H4 160 aa7.4□□□□□ -1.22
VPS13A-209ENST00000467124 NBPF14Q5TI25 921 aa7.39□□□□□ -1.23
VPS13A-209ENST00000467124 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
VPS13A-209ENST00000467124 TJAP1Q5JTD0 557 aa7.38□□□□□ -1.23
VPS13A-209ENST00000467124 CFAP70Q5T0N1 1121 aa7.38□□□□□ -1.23
VPS13A-209ENST00000467124 FAM160A2Q8N612 972 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-209ENST00000467124 EVA1BQ9NVM1 165 aa7.38□□□□□ -1.23
VPS13A-209ENST00000467124 LMOD1P29536 600 aaPredicted RBP7.37□□□□□ -1.23
VPS13A-209ENST00000467124 EIF4G2P78344 907 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS13A-209ENST00000467124 KCNH2Q12809 1159 aa7.37□□□□□ -1.23
VPS13A-209ENST00000467124 NR1H3Q13133 447 aa7.37□□□□□ -1.23
VPS13A-209ENST00000467124 TRAIPQ9BWF2 469 aa7.37□□□□□ -1.23
VPS13A-209ENST00000467124 ALG2Q9H553 416 aa7.37□□□□□ -1.23
VPS13A-209ENST00000467124 ACIN1Q9UKV3 1341 aaKnown RBP7.36□□□□□ -1.23
VPS13A-209ENST00000467124 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-209ENST00000467124 ZBBXA8MT70 800 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 TLL1O43897 1013 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
VPS13A-209ENST00000467124 PTPN5P54829 565 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 UCN2Q96RP3 112 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 PPP1R12CQ9BZL4 782 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 SLC6A16Q9GZN6 736 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 MAP10Q9P2G4 905 aa7.36□□□□□ -1.23
VPS13A-209ENST00000467124 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
VPS13A-209ENST00000467124 CTHP32929 405 aa7.35□□□□□ -1.23
VPS13A-209ENST00000467124 MCCD1P59942 119 aaPredicted RBP7.35□□□□□ -1.23
VPS13A-209ENST00000467124 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
VPS13A-209ENST00000467124 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
VPS13A-209ENST00000467124 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
VPS13A-209ENST00000467124 HCSTQ9UBK5 93 aa7.35□□□□□ -1.23
VPS13A-209ENST00000467124 MMRN1Q13201 1228 aa7.34□□□□□ -1.23
VPS13A-209ENST00000467124 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
VPS13A-209ENST00000467124 KCTD17Q8N5Z5 321 aa7.34□□□□□ -1.23
VPS13A-209ENST00000467124 PRDM9Q9NQV7 894 aa7.34□□□□□ -1.23
VPS13A-209ENST00000467124 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-209ENST00000467124 FBXO45P0C2W1 286 aa7.33□□□□□ -1.24
VPS13A-209ENST00000467124 PTK2Q05397 1052 aa7.33□□□□□ -1.24
VPS13A-209ENST00000467124 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
VPS13A-209ENST00000467124 NFATC2IPQ8NCF5 419 aa7.31□□□□□ -1.24
VPS13A-209ENST00000467124 RNF166Q96A37 237 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-209ENST00000467124 UNC93B1Q9H1C4 597 aa7.31□□□□□ -1.24
VPS13A-209ENST00000467124 CSB-PGBD3P0DP91 1061 aa7.3□□□□□ -1.24
VPS13A-209ENST00000467124 GGCXP38435 758 aa7.3□□□□□ -1.24
VPS13A-209ENST00000467124 SRPK2P78362 688 aaKnown RBP7.3□□□□□ -1.24
VPS13A-209ENST00000467124 ZNF516Q92618 1163 aa7.3□□□□□ -1.24
VPS13A-209ENST00000467124 GZF1Q9H116 711 aaPredicted RBP7.3□□□□□ -1.24
VPS13A-209ENST00000467124 MAFBQ9Y5Q3 323 aaPredicted RBP7.3□□□□□ -1.24
VPS13A-209ENST00000467124 KCNC4Q03721 635 aa7.29□□□□□ -1.24
VPS13A-209ENST00000467124 PDE4CQ08493 712 aa7.29□□□□□ -1.24
VPS13A-209ENST00000467124 S1PR4O95977 384 aa7.28□□□□□ -1.24
VPS13A-209ENST00000467124 SH3BP5LQ7L8J4 393 aa7.28□□□□□ -1.24
VPS13A-209ENST00000467124 DEPDC4Q8N2C3 294 aa7.28□□□□□ -1.24
VPS13A-209ENST00000467124 CCDC9Q9Y3X0 531 aaKnown RBP7.28□□□□□ -1.24
VPS13A-209ENST00000467124 BPHLQ86WA6 291 aaPredicted RBP7.27□□□□□ -1.25
VPS13A-209ENST00000467124 CCDC24Q8N4L8 307 aa7.27□□□□□ -1.25
VPS13A-209ENST00000467124 ARHGAP9Q9BRR9 750 aa7.27□□□□□ -1.25
VPS13A-209ENST00000467124 FCF1Q9Y324 198 aaKnown RBP7.27□□□□□ -1.25
VPS13A-209ENST00000467124 SKIP12755 728 aa7.26□□□□□ -1.25
VPS13A-209ENST00000467124 SH3RF1Q7Z6J0 888 aa7.26□□□□□ -1.25
VPS13A-209ENST00000467124 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
VPS13A-209ENST00000467124 ANKLE1Q8NAG6 615 aa7.26□□□□□ -1.25
VPS13A-209ENST00000467124 ATP9BO43861 1147 aa7.25□□□□□ -1.25
VPS13A-209ENST00000467124 CCDC125Q86Z20 511 aa7.25□□□□□ -1.25
VPS13A-209ENST00000467124 SPNS2Q8IVW8 549 aa7.25□□□□□ -1.25
VPS13A-209ENST00000467124 FAM174AQ8TBP5 190 aa7.25□□□□□ -1.25
VPS13A-209ENST00000467124 CDV3Q9UKY7 258 aaKnown RBP7.25□□□□□ -1.25
VPS13A-209ENST00000467124 PCDHB9Q9Y5E1 797 aa7.25□□□□□ -1.25
VPS13A-209ENST00000467124 LZTS3O60299 673 aaPredicted RBP7.24□□□□□ -1.25
VPS13A-209ENST00000467124 ZBTB33Q86T24 672 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 NKX2-3Q8TAU0 364 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 ADAM32Q8TC27 787 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 OCSTAMPQ9BR26 566 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 USTQ9Y2C2 406 aa7.24□□□□□ -1.25
VPS13A-209ENST00000467124 IFFO2Q5TF58 517 aa7.23□□□□□ -1.25
VPS13A-209ENST00000467124 PTCRAQ6ISU1 281 aaPredicted RBP7.23□□□□□ -1.25
VPS13A-209ENST00000467124 C1QTNF2Q9BXJ5 285 aa7.23□□□□□ -1.25
VPS13A-209ENST00000467124 ZBTB24O43167 697 aaPredicted RBP7.22□□□□□ -1.25
VPS13A-209ENST00000467124 WNT7BP56706 349 aa7.22□□□□□ -1.25
VPS13A-209ENST00000467124 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
VPS13A-209ENST00000467124 SLFNL1Q499Z3 407 aa7.22□□□□□ -1.25
VPS13A-209ENST00000467124 TRMT44Q8IYL2 757 aaKnown RBP7.22□□□□□ -1.25
VPS13A-209ENST00000467124 CARD14Q9BXL6 1004 aa7.22□□□□□ -1.25
VPS13A-209ENST00000467124 VRTNQ9H8Y1 702 aa7.22□□□□□ -1.25
VPS13A-209ENST00000467124 USP17L3A6NCW0 530 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L4A6NCW7 530 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 USP17L5A8MUK1 530 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 ATG7O95352 703 aa7.21□□□□□ -1.26
VPS13A-209ENST00000467124 RANGAP1P46060 587 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms