RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
UBR4-210ENST00000466969 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
UBR4-210ENST00000466969 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
UBR4-210ENST00000466969 MTFR1LQ9H019 292 aa19.66■□□□□ 0.74
UBR4-210ENST00000466969 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
UBR4-210ENST00000466969 ARXQ96QS3 562 aa19.65■□□□□ 0.74
UBR4-210ENST00000466969 C11orf95C9JLR9 678 aaPredicted RBP19.64■□□□□ 0.73
UBR4-210ENST00000466969 PLSCR1O15162 318 aa19.64■□□□□ 0.73
UBR4-210ENST00000466969 PRELPP51888 382 aa19.64■□□□□ 0.73
UBR4-210ENST00000466969 WAPLQ7Z5K2 1190 aa19.64■□□□□ 0.73
UBR4-210ENST00000466969 PRDM11Q9NQV5 511 aa19.64■□□□□ 0.73
UBR4-210ENST00000466969 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
UBR4-210ENST00000466969 FMN2Q9NZ56 1722 aa19.63■□□□□ 0.73
UBR4-210ENST00000466969 NUP155O75694 1391 aa19.63■□□□□ 0.73
UBR4-210ENST00000466969 STRN4Q9NRL3 753 aa19.63■□□□□ 0.73
UBR4-210ENST00000466969 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
UBR4-210ENST00000466969 MAP3K5Q99683 1374 aa19.62■□□□□ 0.73
UBR4-210ENST00000466969 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
UBR4-210ENST00000466969 GPBP1L1Q9HC44 474 aaPredicted RBP19.61■□□□□ 0.73
UBR4-210ENST00000466969 BARGINQ6ZT62 677 aa19.6■□□□□ 0.73
UBR4-210ENST00000466969 SGIP1Q9BQI5 828 aa19.6■□□□□ 0.73
UBR4-210ENST00000466969 RGPD3A6NKT7 1758 aaPredicted RBP19.6■□□□□ 0.73
UBR4-210ENST00000466969 RGPD4Q7Z3J3 1758 aa19.6■□□□□ 0.73
UBR4-210ENST00000466969 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
UBR4-210ENST00000466969 STK26Q9P289 416 aa19.59■□□□□ 0.73
UBR4-210ENST00000466969 TNS4Q8IZW8 715 aa19.58■□□□□ 0.72
UBR4-210ENST00000466969 NRXN1Q9ULB1 1477 aa19.58■□□□□ 0.72
UBR4-210ENST00000466969 TECPR2O15040 1411 aa19.58■□□□□ 0.72
UBR4-210ENST00000466969 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
UBR4-210ENST00000466969 PCDH10Q9P2E7 1040 aa19.56■□□□□ 0.72
UBR4-210ENST00000466969 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
UBR4-210ENST00000466969 SLC15A2Q16348 729 aa19.55■□□□□ 0.72
UBR4-210ENST00000466969 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
UBR4-210ENST00000466969 EVA1CP58658 441 aa19.54■□□□□ 0.72
UBR4-210ENST00000466969 FAM50AQ14320 339 aaKnown RBP19.54■□□□□ 0.72
UBR4-210ENST00000466969 RGPD8O14715 1765 aaPredicted RBP19.54■□□□□ 0.72
UBR4-210ENST00000466969 KIF1BO60333 1816 aa19.53■□□□□ 0.72
UBR4-210ENST00000466969 APLP1P51693 650 aa19.53■□□□□ 0.72
UBR4-210ENST00000466969 CLTCL1P53675 1640 aa19.53■□□□□ 0.72
UBR4-210ENST00000466969 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
UBR4-210ENST00000466969 PMFBP1Q8TBY8 1022 aa19.52■□□□□ 0.72
UBR4-210ENST00000466969 PLEKHH1Q9ULM0 1364 aa19.52■□□□□ 0.72
UBR4-210ENST00000466969 CHRNA2Q15822 529 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 PROM2Q8N271 834 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 TCP11L2Q8N4U5 519 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 OVOS2A0A0G2JMS6 1433 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 OVOS2A0A0J9YW53 1432 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 OVOS2Q6IE36 1432 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
UBR4-210ENST00000466969 KIAA0232Q92628 1395 aa19.49■□□□□ 0.71
UBR4-210ENST00000466969 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
UBR4-210ENST00000466969 ZNF526Q8TF50 670 aaPredicted RBP19.48■□□□□ 0.71
UBR4-210ENST00000466969 DNAJC5GQ8N7S2 189 aa19.47■□□□□ 0.71
UBR4-210ENST00000466969 ABCC11Q96J66 1382 aa19.46■□□□□ 0.71
UBR4-210ENST00000466969 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
UBR4-210ENST00000466969 SSH2Q76I76 1423 aa19.46■□□□□ 0.71
UBR4-210ENST00000466969 TXNRD1Q16881 649 aa19.46■□□□□ 0.71
UBR4-210ENST00000466969 THRAP3Q9Y2W1 955 aaKnown RBP19.46■□□□□ 0.71
UBR4-210ENST00000466969 ALS2Q96Q42 1657 aa19.46■□□□□ 0.71
UBR4-210ENST00000466969 APLP2Q06481 763 aa19.45■□□□□ 0.7
UBR4-210ENST00000466969 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
UBR4-210ENST00000466969 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
UBR4-210ENST00000466969 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
UBR4-210ENST00000466969 DHX57Q6P158 1386 aaKnown RBP19.43■□□□□ 0.7
UBR4-210ENST00000466969 POLD1P28340 1107 aa19.42■□□□□ 0.7
UBR4-210ENST00000466969 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
UBR4-210ENST00000466969 PTF1AQ7RTS3 328 aa19.42■□□□□ 0.7
UBR4-210ENST00000466969 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
UBR4-210ENST00000466969 KNDC1Q76NI1 1749 aa19.4■□□□□ 0.7
UBR4-210ENST00000466969 PARP4Q9UKK3 1724 aaKnown RBP19.4■□□□□ 0.7
UBR4-210ENST00000466969 CRYBG1Q9Y4K1 1723 aa19.4■□□□□ 0.7
UBR4-210ENST00000466969 YBX3P16989 372 aaKnown RBP eCLIP19.4■□□□□ 0.7
UBR4-210ENST00000466969 PEAK1Q9H792 1746 aa19.39■□□□□ 0.7
UBR4-210ENST00000466969 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
UBR4-210ENST00000466969 NLGN2Q8NFZ4 835 aa19.39■□□□□ 0.69
UBR4-210ENST00000466969 ACIN1Q9UKV3 1341 aaKnown RBP19.39■□□□□ 0.69
UBR4-210ENST00000466969 PPLO60437 1756 aa19.38■□□□□ 0.69
UBR4-210ENST00000466969 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
UBR4-210ENST00000466969 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
UBR4-210ENST00000466969 DDB1Q16531 1140 aa19.36■□□□□ 0.69
UBR4-210ENST00000466969 SIRT1Q96EB6 747 aa19.36■□□□□ 0.69
UBR4-210ENST00000466969 ATP7BP35670 1465 aa19.35■□□□□ 0.69
UBR4-210ENST00000466969 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
UBR4-210ENST00000466969 ADCY9O60503 1353 aa19.34■□□□□ 0.69
UBR4-210ENST00000466969 AATKQ6ZMQ8 1374 aa19.34■□□□□ 0.69
UBR4-210ENST00000466969 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
UBR4-210ENST00000466969 ADGRF5Q8IZF2 1346 aa19.33■□□□□ 0.69
UBR4-210ENST00000466969 KIF3CO14782 793 aa19.33■□□□□ 0.68
UBR4-210ENST00000466969 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBR4-210ENST00000466969 JMYQ8N9B5 988 aa19.32■□□□□ 0.68
UBR4-210ENST00000466969 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
UBR4-210ENST00000466969 SLC16A10Q8TF71 515 aa19.32■□□□□ 0.68
UBR4-210ENST00000466969 KLRG1Q96E93 195 aa19.32■□□□□ 0.68
UBR4-210ENST00000466969 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
UBR4-210ENST00000466969 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
UBR4-210ENST00000466969 BCL9O00512 1426 aa19.27■□□□□ 0.68
UBR4-210ENST00000466969 TOMM70O94826 608 aa19.27■□□□□ 0.68
UBR4-210ENST00000466969 LRRC37A3O60309 1634 aa19.26■□□□□ 0.67
UBR4-210ENST00000466969 PCNTO95613 3336 aa19.26■□□□□ 0.67
UBR4-210ENST00000466969 NUTM2GQ5VZR2 741 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms