RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MTRQ99707 1265 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 IL21Q9HBE4 155 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 GPSM3Q9Y4H4 160 aa8.14□□□□□ -1.11
CDC42BPA-211ENST00000466538 ACIN1Q9UKV3 1341 aaKnown RBP8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 POTEMA6NI47 508 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 ZBBXA8MT70 800 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 CTHP32929 405 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 POTEGQ6S5H5 508 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 ZNF592Q92610 1267 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
CDC42BPA-211ENST00000466538 PTPN5P54829 565 aa8.12□□□□□ -1.11
CDC42BPA-211ENST00000466538 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
CDC42BPA-211ENST00000466538 PDXDC2PQ6P474 469 aa8.12□□□□□ -1.11
CDC42BPA-211ENST00000466538 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-211ENST00000466538 MCCD1P59942 119 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-211ENST00000466538 MAP10Q9P2G4 905 aa8.11□□□□□ -1.11
CDC42BPA-211ENST00000466538 PTK2Q05397 1052 aa8.1□□□□□ -1.11
CDC42BPA-211ENST00000466538 PDE4CQ08493 712 aa8.1□□□□□ -1.11
CDC42BPA-211ENST00000466538 PPP1R12CQ9BZL4 782 aa8.1□□□□□ -1.11
CDC42BPA-211ENST00000466538 SLC6A16Q9GZN6 736 aa8.1□□□□□ -1.11
CDC42BPA-211ENST00000466538 FBXO45P0C2W1 286 aa8.09□□□□□ -1.11
CDC42BPA-211ENST00000466538 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
CDC42BPA-211ENST00000466538 PBXIP1Q96AQ6 731 aa8.08□□□□□ -1.12
CDC42BPA-211ENST00000466538 PALM3A6NDB9 673 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-211ENST00000466538 ZNF516Q92618 1163 aa8.07□□□□□ -1.12
CDC42BPA-211ENST00000466538 PRDM9Q9NQV7 894 aa8.07□□□□□ -1.12
CDC42BPA-211ENST00000466538 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-211ENST00000466538 TLL1O43897 1013 aa8.06□□□□□ -1.12
CDC42BPA-211ENST00000466538 CFAP70Q5T0N1 1121 aa8.06□□□□□ -1.12
CDC42BPA-211ENST00000466538 NFATC2IPQ8NCF5 419 aa8.06□□□□□ -1.12
CDC42BPA-211ENST00000466538 PCDH10Q9P2E7 1040 aa8.06□□□□□ -1.12
CDC42BPA-211ENST00000466538 SRPK2P78362 688 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-211ENST00000466538 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
CDC42BPA-211ENST00000466538 TRAIPQ9BWF2 469 aa8.05□□□□□ -1.12
CDC42BPA-211ENST00000466538 UNC93B1Q9H1C4 597 aa8.05□□□□□ -1.12
CDC42BPA-211ENST00000466538 HCSTQ9UBK5 93 aa8.05□□□□□ -1.12
CDC42BPA-211ENST00000466538 PTCRAQ6ISU1 281 aaPredicted RBP8.04□□□□□ -1.12
CDC42BPA-211ENST00000466538 UCN2Q96RP3 112 aa8.04□□□□□ -1.12
CDC42BPA-211ENST00000466538 ATP9BO43861 1147 aa8.03□□□□□ -1.12
CDC42BPA-211ENST00000466538 RFX1P22670 979 aa8.03□□□□□ -1.12
CDC42BPA-211ENST00000466538 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
CDC42BPA-211ENST00000466538 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
CDC42BPA-211ENST00000466538 ZBTB33Q86T24 672 aa8.02□□□□□ -1.13
CDC42BPA-211ENST00000466538 ARHGAP9Q9BRR9 750 aa8.02□□□□□ -1.13
CDC42BPA-211ENST00000466538 CEP126Q9P2H0 1117 aa8.02□□□□□ -1.13
CDC42BPA-211ENST00000466538 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
CDC42BPA-211ENST00000466538 LZTS3O60299 673 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 S1PR4O95977 384 aa8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 KCNC4Q03721 635 aa8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 NKX2-3Q8TAU0 364 aa8.01□□□□□ -1.13
CDC42BPA-211ENST00000466538 RETREG2Q8NC44 543 aa8□□□□□ -1.13
CDC42BPA-211ENST00000466538 ADAM32Q8TC27 787 aa8□□□□□ -1.13
CDC42BPA-211ENST00000466538 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
CDC42BPA-211ENST00000466538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 ITGBL1O95965 494 aaPredicted RBP7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 GGCXP38435 758 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 FCF1Q9Y324 198 aaKnown RBP7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 PCDHB9Q9Y5E1 797 aa7.99□□□□□ -1.13
CDC42BPA-211ENST00000466538 ATG7O95352 703 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 CSB-PGBD3P0DP91 1061 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 PHTF2Q8N3S3 785 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 BAP1Q92560 729 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 USTQ9Y2C2 406 aa7.98□□□□□ -1.13
CDC42BPA-211ENST00000466538 ZBTB7CA1YPR0 619 aa7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 SKIP12755 728 aa7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 TRIM26Q12899 539 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 MAP7D1Q3KQU3 841 aa7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 DZIP3Q86Y13 1208 aaKnown RBP7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 RNF166Q96A37 237 aaPredicted RBP7.97□□□□□ -1.13
CDC42BPA-211ENST00000466538 ZBTB24O43167 697 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 AGERQ15109 404 aa7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 KANK4Q5T7N3 995 aaPredicted RBP7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 RNF135Q8IUD6 432 aa7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 ANKLE1Q8NAG6 615 aa7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
CDC42BPA-211ENST00000466538 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
CDC42BPA-211ENST00000466538 RNF20Q5VTR2 975 aa7.95□□□□□ -1.14
CDC42BPA-211ENST00000466538 SPNS2Q8IVW8 549 aa7.95□□□□□ -1.14
CDC42BPA-211ENST00000466538 CDV3Q9UKY7 258 aaKnown RBP7.95□□□□□ -1.14
CDC42BPA-211ENST00000466538 USP17L5A8MUK1 530 aa7.94□□□□□ -1.14
CDC42BPA-211ENST00000466538 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
CDC42BPA-211ENST00000466538 MAGEB6P1A0A0J9YX57 407 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 RNF223E7ERA6 249 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 RPIAP49247 311 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 SH3BP2P78314 561 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
CDC42BPA-211ENST00000466538 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms