RNA–Protein interactions for RNA: ENST00000466490.6

SRPRB-201, Transcript of SRP receptor subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRPRB, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-201ENST00000466490 ZNF500O60304 480 aaPredicted RBP16.76■□□□□ 0.27
SRPRB-201ENST00000466490 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
SRPRB-201ENST00000466490 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
SRPRB-201ENST00000466490 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
SRPRB-201ENST00000466490 BAG4O95429 457 aaKnown RBP16.76■□□□□ 0.27
SRPRB-201ENST00000466490 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
SRPRB-201ENST00000466490 TET3O43151 1660 aa16.75■□□□□ 0.27
SRPRB-201ENST00000466490 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
SRPRB-201ENST00000466490 LNPKQ9C0E8 428 aa16.75■□□□□ 0.27
SRPRB-201ENST00000466490 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
SRPRB-201ENST00000466490 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
SRPRB-201ENST00000466490 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
SRPRB-201ENST00000466490 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
SRPRB-201ENST00000466490 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
SRPRB-201ENST00000466490 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
SRPRB-201ENST00000466490 GAS2L2Q8NHY3 880 aa16.74■□□□□ 0.27
SRPRB-201ENST00000466490 R3HCC1Q9Y3T6 440 aaKnown RBP16.74■□□□□ 0.27
SRPRB-201ENST00000466490 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
SRPRB-201ENST00000466490 PDLIM2Q96JY6 352 aa16.73■□□□□ 0.27
SRPRB-201ENST00000466490 NOS1P29475 1434 aa16.73■□□□□ 0.27
SRPRB-201ENST00000466490 DEPDC5O75140 1603 aa16.73■□□□□ 0.27
SRPRB-201ENST00000466490 ABCC11Q96J66 1382 aa16.73■□□□□ 0.27
SRPRB-201ENST00000466490 IPO8O15397 1037 aaKnown RBP16.73■□□□□ 0.27
SRPRB-201ENST00000466490 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
SRPRB-201ENST00000466490 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRPRB-201ENST00000466490 FAM13BQ9NYF5 915 aa16.72■□□□□ 0.27
SRPRB-201ENST00000466490 ADGRF5Q8IZF2 1346 aa16.72■□□□□ 0.27
SRPRB-201ENST00000466490 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.27
SRPRB-201ENST00000466490 IFT172Q9UG01 1749 aa16.71■□□□□ 0.26
SRPRB-201ENST00000466490 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
SRPRB-201ENST00000466490 IL16Q14005 1332 aa16.7■□□□□ 0.26
SRPRB-201ENST00000466490 NUCB2P80303 420 aa16.7■□□□□ 0.26
SRPRB-201ENST00000466490 TBC1D9Q6ZT07 1266 aa16.7■□□□□ 0.26
SRPRB-201ENST00000466490 MCM5P33992 734 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
SRPRB-201ENST00000466490 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
SRPRB-201ENST00000466490 ZC3H13Q5T200 1668 aaKnown RBP16.69■□□□□ 0.26
SRPRB-201ENST00000466490 ABCC1P33527 1531 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 AK9Q5TCS8 1911 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 KIF1BO60333 1816 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 PLCH2O75038 1416 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 UQCRHP07919 91 aa16.69■□□□□ 0.26
SRPRB-201ENST00000466490 REREQ9P2R6 1566 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 INO80Q9ULG1 1556 aaPredicted RBP16.68■□□□□ 0.26
SRPRB-201ENST00000466490 NSD2O96028 1365 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
SRPRB-201ENST00000466490 RBSNQ9H1K0 784 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 LMBRD1Q9NUN5 540 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 ZKSCAN5Q9Y2L8 839 aa16.68■□□□□ 0.26
SRPRB-201ENST00000466490 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
SRPRB-201ENST00000466490 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 VWDEQ8N2E2 1590 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
SRPRB-201ENST00000466490 SMAP1Q8IYB5 467 aaPredicted RBP16.67■□□□□ 0.26
SRPRB-201ENST00000466490 CYP2E1P05181 493 aaPredicted RBP16.66■□□□□ 0.26
SRPRB-201ENST00000466490 XPCQ01831 940 aaPredicted RBP16.66■□□□□ 0.26
SRPRB-201ENST00000466490 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
SRPRB-201ENST00000466490 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
SRPRB-201ENST00000466490 QRICH2Q9H0J4 1663 aa16.66■□□□□ 0.26
SRPRB-201ENST00000466490 MED14O60244 1454 aa16.65■□□□□ 0.26
SRPRB-201ENST00000466490 NCLP19338 710 aaKnown RBP16.65■□□□□ 0.26
SRPRB-201ENST00000466490 RABEP1Q15276 862 aa16.65■□□□□ 0.26
SRPRB-201ENST00000466490 CHMP4BQ9H444 224 aaKnown RBP16.65■□□□□ 0.26
SRPRB-201ENST00000466490 PPRC1Q5VV67 1664 aaKnown RBP16.65■□□□□ 0.26
SRPRB-201ENST00000466490 SPAG9O60271 1321 aaKnown RBP16.65■□□□□ 0.26
SRPRB-201ENST00000466490 CDC45O75419 566 aa16.65■□□□□ 0.26
SRPRB-201ENST00000466490 PPIP5K1Q6PFW1 1433 aa16.64■□□□□ 0.25
SRPRB-201ENST00000466490 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
SRPRB-201ENST00000466490 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
SRPRB-201ENST00000466490 SASS6Q6UVJ0 657 aa16.63■□□□□ 0.25
SRPRB-201ENST00000466490 CHD1O14646 1710 aa16.63■□□□□ 0.25
SRPRB-201ENST00000466490 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
SRPRB-201ENST00000466490 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
SRPRB-201ENST00000466490 CWC22Q9HCG8 908 aaKnown RBP16.63■□□□□ 0.25
SRPRB-201ENST00000466490 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
SRPRB-201ENST00000466490 UGGT1Q9NYU2 1555 aa16.62■□□□□ 0.25
SRPRB-201ENST00000466490 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
SRPRB-201ENST00000466490 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
SRPRB-201ENST00000466490 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
SRPRB-201ENST00000466490 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
SRPRB-201ENST00000466490 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
SRPRB-201ENST00000466490 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
SRPRB-201ENST00000466490 MROH2AA6NES4 1674 aa16.6■□□□□ 0.25
SRPRB-201ENST00000466490 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
SRPRB-201ENST00000466490 GPT2Q8TD30 523 aa16.59■□□□□ 0.25
SRPRB-201ENST00000466490 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
SRPRB-201ENST00000466490 PRPF40AO75400 957 aaKnown RBP16.58■□□□□ 0.25
SRPRB-201ENST00000466490 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
SRPRB-201ENST00000466490 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
SRPRB-201ENST00000466490 ARHGAP45Q92619 1136 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms