RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 ZNF428Q96B54 188 aa8.88□□□□□ -0.99
CDHR3-204ENST00000466351 MAP2P11137 1827 aaKnown RBP8.88□□□□□ -0.99
CDHR3-204ENST00000466351 UBR1Q8IWV7 1749 aa8.88□□□□□ -0.99
CDHR3-204ENST00000466351 EDC4Q6P2E9 1401 aaKnown RBP8.88□□□□□ -0.99
CDHR3-204ENST00000466351 LRRC7Q96NW7 1537 aa8.87□□□□□ -0.99
CDHR3-204ENST00000466351 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-204ENST00000466351 DSG3P32926 999 aa8.87□□□□□ -0.99
CDHR3-204ENST00000466351 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDHR3-204ENST00000466351 SLC12A5Q9H2X9 1139 aa8.87□□□□□ -0.99
CDHR3-204ENST00000466351 ZBTB47Q9UFB7 747 aaPredicted RBP8.87□□□□□ -0.99
CDHR3-204ENST00000466351 NALCNQ8IZF0 1738 aa8.87□□□□□ -0.99
CDHR3-204ENST00000466351 RIMS2Q9UQ26 1411 aa8.87□□□□□ -0.99
CDHR3-204ENST00000466351 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
CDHR3-204ENST00000466351 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
CDHR3-204ENST00000466351 CPSF1Q10570 1443 aaKnown RBP8.86□□□□□ -0.99
CDHR3-204ENST00000466351 USP54Q70EL1 1684 aa8.85□□□□□ -0.99
CDHR3-204ENST00000466351 FAM161AQ3B820 660 aa8.85□□□□□ -0.99
CDHR3-204ENST00000466351 HDGFL2Q7Z4V5 671 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-204ENST00000466351 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
CDHR3-204ENST00000466351 MTHFSP49914 203 aa8.84□□□□□ -0.99
CDHR3-204ENST00000466351 HDGFP51858 240 aaKnown RBP8.84□□□□□ -0.99
CDHR3-204ENST00000466351 TCP11L2Q8N4U5 519 aa8.84□□□□□ -0.99
CDHR3-204ENST00000466351 PMFBP1Q8TBY8 1022 aa8.84□□□□□ -0.99
CDHR3-204ENST00000466351 CLUAP1Q96AJ1 413 aa8.84□□□□□ -0.99
CDHR3-204ENST00000466351 PPM1GO15355 546 aaPredicted RBP8.83□□□□□ -1
CDHR3-204ENST00000466351 PLIN1O60240 522 aa8.83□□□□□ -1
CDHR3-204ENST00000466351 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
CDHR3-204ENST00000466351 BRPF1P55201 1214 aaPredicted RBP8.83□□□□□ -1
CDHR3-204ENST00000466351 TMEM132EQ6IEE7 984 aa8.83□□□□□ -1
CDHR3-204ENST00000466351 CCDC146Q8IYE0 955 aa8.83□□□□□ -1
CDHR3-204ENST00000466351 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
CDHR3-204ENST00000466351 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
CDHR3-204ENST00000466351 C20orf194Q5TEA3 1177 aa8.82□□□□□ -1
CDHR3-204ENST00000466351 ZNF219Q9P2Y4 722 aaPredicted RBP8.82□□□□□ -1
CDHR3-204ENST00000466351 KIF16BQ96L93 1317 aa8.81□□□□□ -1
CDHR3-204ENST00000466351 FCHSD2O94868 740 aa8.81□□□□□ -1
CDHR3-204ENST00000466351 PLEKHF1Q96S99 279 aa8.81□□□□□ -1
CDHR3-204ENST00000466351 CHMP4BQ9H444 224 aaKnown RBP8.81□□□□□ -1
CDHR3-204ENST00000466351 CACNA1FO60840 1977 aa8.81□□□□□ -1
CDHR3-204ENST00000466351 SLIT1O75093 1534 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 FMN2Q9NZ56 1722 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 FYB1O15117 783 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
CDHR3-204ENST00000466351 ALDH1L2Q3SY69 923 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 PRAM1Q96QH2 718 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 POGKQ9P215 609 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
CDHR3-204ENST00000466351 ABCB7O75027 752 aa8.79□□□□□ -1
CDHR3-204ENST00000466351 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
CDHR3-204ENST00000466351 C8orf34Q49A92 452 aa8.79□□□□□ -1
CDHR3-204ENST00000466351 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
CDHR3-204ENST00000466351 PTCH1Q13635 1447 aa8.79□□□□□ -1
CDHR3-204ENST00000466351 ARHGAP23Q9P227 1491 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 TNRQ92752 1358 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 PIK3R4Q99570 1358 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 PLEKHG1Q9ULL1 1385 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 DIAPH1O60610 1272 aaKnown RBP8.78□□□□□ -1
CDHR3-204ENST00000466351 BCAR3O75815 825 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 U2AF1L5P0DN76 240 aaPredicted RBP8.78□□□□□ -1
CDHR3-204ENST00000466351 CANXP27824 592 aaKnown RBP8.78□□□□□ -1
CDHR3-204ENST00000466351 TMPOP42166 694 aaKnown RBP8.78□□□□□ -1
CDHR3-204ENST00000466351 U2AF1Q01081 240 aaKnown RBP eCLIP8.78□□□□□ -1
CDHR3-204ENST00000466351 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 ZKSCAN2Q63HK3 967 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 CABP2Q9NPB3 220 aa8.78□□□□□ -1
CDHR3-204ENST00000466351 ATF5Q9Y2D1 282 aaPredicted RBP8.78□□□□□ -1
CDHR3-204ENST00000466351 XRN1Q8IZH2 1706 aaKnown RBP8.77□□□□□ -1
CDHR3-204ENST00000466351 KIF24Q5T7B8 1368 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 TMEM2Q9UHN6 1383 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 N4BP2Q86UW6 1770 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 IPO8O15397 1037 aaKnown RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 PAK3O75914 559 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 NEFMP07197 916 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 MVPQ14764 893 aaKnown RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 CDK19Q9BWU1 502 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 RWDD1Q9H446 243 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-204ENST00000466351 STAG3Q9UJ98 1225 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 DDX19BQ9UMR2 479 aa8.77□□□□□ -1.01
CDHR3-204ENST00000466351 EIF5BO60841 1220 aaKnown RBP8.76□□□□□ -1.01
CDHR3-204ENST00000466351 ARHGAP45Q92619 1136 aa8.76□□□□□ -1.01
CDHR3-204ENST00000466351 ZNF692Q9BU19 519 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-204ENST00000466351 FER1L4A9Z1Z3 1794 aa8.76□□□□□ -1.01
CDHR3-204ENST00000466351 OVOS2A0A0J9YW53 1432 aa8.75□□□□□ -1.01
CDHR3-204ENST00000466351 OVOS2Q6IE36 1432 aa8.75□□□□□ -1.01
CDHR3-204ENST00000466351 ADAMTS13Q76LX8 1427 aa8.75□□□□□ -1.01
CDHR3-204ENST00000466351 SENP3-EIF4A1A0A087X0R7 540 aa8.75□□□□□ -1.01
CDHR3-204ENST00000466351 WASLO00401 505 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-204ENST00000466351 DZIP1LQ8IYY4 767 aaKnown RBP8.75□□□□□ -1.01
CDHR3-204ENST00000466351 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
CDHR3-204ENST00000466351 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.74□□□□□ -1.01
CDHR3-204ENST00000466351 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
CDHR3-204ENST00000466351 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
CDHR3-204ENST00000466351 TRIM35Q9UPQ4 493 aa8.74□□□□□ -1.01
CDHR3-204ENST00000466351 LRRC37A3O60309 1634 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 ANKARQ7Z5J8 1434 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 ZNF142P52746 1687 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-204ENST00000466351 CYB5RLQ6IPT4 315 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 ATF7IPQ6VMQ6 1270 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms