RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.05
CHMP3-206ENST00000466032 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
CHMP3-206ENST00000466032 KDM2AQ9Y2K7 1162 aa8.46□□□□□ -1.06
CHMP3-206ENST00000466032 EID1Q9Y6B2 187 aa8.46□□□□□ -1.06
CHMP3-206ENST00000466032 GPRASP1Q5JY77 1395 aa8.46□□□□□ -1.06
CHMP3-206ENST00000466032 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.06
CHMP3-206ENST00000466032 A2ML1A8K2U0 1454 aa8.45□□□□□ -1.06
CHMP3-206ENST00000466032 UGGT1Q9NYU2 1555 aa8.45□□□□□ -1.06
CHMP3-206ENST00000466032 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
CHMP3-206ENST00000466032 CABP2Q9NPB3 220 aa8.45□□□□□ -1.06
CHMP3-206ENST00000466032 RIMS1Q86UR5 1692 aaKnown RBP8.45□□□□□ -1.06
CHMP3-206ENST00000466032 PTPRMP28827 1452 aa8.45□□□□□ -1.06
CHMP3-206ENST00000466032 LAMC1P11047 1609 aa8.44□□□□□ -1.06
CHMP3-206ENST00000466032 ROCK2O75116 1388 aaKnown RBP8.44□□□□□ -1.06
CHMP3-206ENST00000466032 EIF3AQ14152 1382 aaKnown RBP8.44□□□□□ -1.06
CHMP3-206ENST00000466032 TMEM2Q9UHN6 1383 aa8.44□□□□□ -1.06
CHMP3-206ENST00000466032 IFT172Q9UG01 1749 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 PPLO60437 1756 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
CHMP3-206ENST00000466032 CARD11Q9BXL7 1154 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 C14orf93Q9H972 538 aaKnown RBP8.43□□□□□ -1.06
CHMP3-206ENST00000466032 PIK3C2GO75747 1445 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 RIMS2Q9UQ26 1411 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 SLIT1O75093 1534 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 NEXMIFQ5QGS0 1516 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 SETBP1Q9Y6X0 1596 aa8.43□□□□□ -1.06
CHMP3-206ENST00000466032 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
CHMP3-206ENST00000466032 PSEN2P49810 448 aa8.42□□□□□ -1.06
CHMP3-206ENST00000466032 SUZ12Q15022 739 aaKnown RBP8.42□□□□□ -1.06
CHMP3-206ENST00000466032 NBPF8Q3BBV2 869 aa8.42□□□□□ -1.06
CHMP3-206ENST00000466032 UBR1Q8IWV7 1749 aa8.41□□□□□ -1.06
CHMP3-206ENST00000466032 ZNF142P52746 1687 aaPredicted RBP8.41□□□□□ -1.06
CHMP3-206ENST00000466032 TRPM1Q7Z4N2 1603 aa8.41□□□□□ -1.06
CHMP3-206ENST00000466032 CEP170BQ9Y4F5 1589 aaPredicted RBP8.41□□□□□ -1.06
CHMP3-206ENST00000466032 ARHGAP23Q9P227 1491 aa8.41□□□□□ -1.06
CHMP3-206ENST00000466032 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
CHMP3-206ENST00000466032 PDAP1Q13442 181 aaKnown RBP8.41□□□□□ -1.06
CHMP3-206ENST00000466032 ANKLE2Q86XL3 938 aa8.41□□□□□ -1.06
CHMP3-206ENST00000466032 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
CHMP3-206ENST00000466032 PLEKHG1Q9ULL1 1385 aa8.4□□□□□ -1.06
CHMP3-206ENST00000466032 ADGRF5Q8IZF2 1346 aa8.4□□□□□ -1.06
CHMP3-206ENST00000466032 CDCA8Q53HL2 280 aa8.4□□□□□ -1.06
CHMP3-206ENST00000466032 SCAF11Q99590 1463 aaKnown RBP8.39□□□□□ -1.07
CHMP3-206ENST00000466032 USP47Q96K76 1375 aa8.39□□□□□ -1.07
CHMP3-206ENST00000466032 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
CHMP3-206ENST00000466032 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
CHMP3-206ENST00000466032 PIK3R4Q99570 1358 aa8.38□□□□□ -1.07
CHMP3-206ENST00000466032 TBX22Q9Y458 520 aa8.38□□□□□ -1.07
CHMP3-206ENST00000466032 DIP2AQ14689 1571 aa8.38□□□□□ -1.07
CHMP3-206ENST00000466032 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
CHMP3-206ENST00000466032 HSPA5P11021 654 aaKnown RBP8.37□□□□□ -1.07
CHMP3-206ENST00000466032 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
CHMP3-206ENST00000466032 PUS7Q96PZ0 661 aaKnown RBP8.37□□□□□ -1.07
CHMP3-206ENST00000466032 MYO5BQ9ULV0 1848 aa8.36□□□□□ -1.07
CHMP3-206ENST00000466032 KDM4FA0A1W2PPD8 638 aa8.36□□□□□ -1.07
CHMP3-206ENST00000466032 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 MED14O60244 1454 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 TMF1P82094 1093 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 NBPF1Q3BBV0 1214 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 BCANQ96GW7 911 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 ALKQ9UM73 1620 aa8.35□□□□□ -1.07
CHMP3-206ENST00000466032 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
CHMP3-206ENST00000466032 SLC34A2O95436 690 aa8.34□□□□□ -1.07
CHMP3-206ENST00000466032 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
CHMP3-206ENST00000466032 DLC1Q96QB1 1528 aa8.34□□□□□ -1.08
CHMP3-206ENST00000466032 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
CHMP3-206ENST00000466032 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 TECPR2O15040 1411 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 LTKP29376 864 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 FAM135BQ49AJ0 1406 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 YTHDC2Q9H6S0 1430 aaKnown RBP8.33□□□□□ -1.08
CHMP3-206ENST00000466032 VPS9D1Q9Y2B5 631 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 PCDHGA4Q9Y5G9 962 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 IQGAP1P46940 1657 aa8.33□□□□□ -1.08
CHMP3-206ENST00000466032 NPHP4O75161 1426 aaPredicted RBP8.31□□□□□ -1.08
CHMP3-206ENST00000466032 ADAMTS13Q76LX8 1427 aa8.31□□□□□ -1.08
CHMP3-206ENST00000466032 NUTM2DQ5VT03 806 aaPredicted RBP8.31□□□□□ -1.08
CHMP3-206ENST00000466032 POGKQ9P215 609 aa8.31□□□□□ -1.08
CHMP3-206ENST00000466032 EVC2Q86UK5 1308 aa8.3□□□□□ -1.08
CHMP3-206ENST00000466032 BHMG1C9JSJ3 638 aaPredicted RBP8.3□□□□□ -1.08
CHMP3-206ENST00000466032 TESK2Q96S53 571 aa8.3□□□□□ -1.08
CHMP3-206ENST00000466032 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
CHMP3-206ENST00000466032 NINLQ9Y2I6 1382 aa8.3□□□□□ -1.08
CHMP3-206ENST00000466032 PTCH1Q13635 1447 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 NRXN3Q9Y4C0 1643 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 POLR1AO95602 1720 aaPredicted RBP8.29□□□□□ -1.08
CHMP3-206ENST00000466032 KNDC1Q76NI1 1749 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 TMEM132EQ6IEE7 984 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 CCDC7Q96M83 1385 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 CPS1P31327 1500 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
CHMP3-206ENST00000466032 DIEXFQ68CQ4 756 aaKnown RBP8.28□□□□□ -1.08
CHMP3-206ENST00000466032 SETD1AO15047 1707 aaKnown RBP8.28□□□□□ -1.08
CHMP3-206ENST00000466032 NCOA3Q9Y6Q9 1424 aa8.28□□□□□ -1.08
CHMP3-206ENST00000466032 LMTK3Q96Q04 1460 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 METP08581 1390 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 KCNA6P17658 529 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 PRAM1Q96QH2 718 aa8.27□□□□□ -1.09
CHMP3-206ENST00000466032 AMOTL2Q9Y2J4 779 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms