RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 HRCP23327 699 aa15.24■□□□□ 0.03
GPNMB-206ENST00000465673 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
GPNMB-206ENST00000465673 ADGRB2O60241 1585 aa15.24■□□□□ 0.03
GPNMB-206ENST00000465673 SPATA31A5Q5VU36 1347 aa15.23■□□□□ 0.03
GPNMB-206ENST00000465673 SPATA31A7Q8IWB4 1347 aa15.23■□□□□ 0.03
GPNMB-206ENST00000465673 ALS2Q96Q42 1657 aa15.23■□□□□ 0.03
GPNMB-206ENST00000465673 DCAF11Q8TEB1 546 aa15.23■□□□□ 0.03
GPNMB-206ENST00000465673 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
GPNMB-206ENST00000465673 NUTM2GQ5VZR2 741 aa15.22■□□□□ 0.03
GPNMB-206ENST00000465673 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
GPNMB-206ENST00000465673 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
GPNMB-206ENST00000465673 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.03
GPNMB-206ENST00000465673 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
GPNMB-206ENST00000465673 LRP5O75197 1615 aa15.21■□□□□ 0.02
GPNMB-206ENST00000465673 EZH2Q15910 746 aaKnown RBP15.2■□□□□ 0.02
GPNMB-206ENST00000465673 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
GPNMB-206ENST00000465673 STRN4Q9NRL3 753 aa15.19■□□□□ 0.02
GPNMB-206ENST00000465673 KIAA0232Q92628 1395 aa15.19■□□□□ 0.02
GPNMB-206ENST00000465673 CRYBG1Q9Y4K1 1723 aa15.18■□□□□ 0.02
GPNMB-206ENST00000465673 TRIM37O94972 964 aa15.18■□□□□ 0.02
GPNMB-206ENST00000465673 ZC3H6P61129 1189 aaKnown RBP15.18■□□□□ 0.02
GPNMB-206ENST00000465673 NUDT16Q96DE0 195 aaKnown RBP15.18■□□□□ 0.02
GPNMB-206ENST00000465673 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
GPNMB-206ENST00000465673 EIF3AQ14152 1382 aaKnown RBP15.17■□□□□ 0.02
GPNMB-206ENST00000465673 USP35Q9P2H5 1018 aa15.17■□□□□ 0.02
GPNMB-206ENST00000465673 THSD7AQ9UPZ6 1657 aa15.16■□□□□ 0.02
GPNMB-206ENST00000465673 ATP7BP35670 1465 aa15.15■□□□□ 0.02
GPNMB-206ENST00000465673 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
GPNMB-206ENST00000465673 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
GPNMB-206ENST00000465673 CDK19Q9BWU1 502 aa15.15■□□□□ 0.02
GPNMB-206ENST00000465673 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
GPNMB-206ENST00000465673 APBA3O96018 575 aa15.13■□□□□ 0.01
GPNMB-206ENST00000465673 ACEP12821 1306 aa15.13■□□□□ 0.01
GPNMB-206ENST00000465673 DISP2A7MBM2 1401 aa15.12■□□□□ 0.01
GPNMB-206ENST00000465673 EVA1CP58658 441 aa15.12■□□□□ 0.01
GPNMB-206ENST00000465673 NBPF8Q3BBV2 869 aa15.12■□□□□ 0.01
GPNMB-206ENST00000465673 LARP1Q6PKG0 1096 aaKnown RBP15.12■□□□□ 0.01
GPNMB-206ENST00000465673 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
GPNMB-206ENST00000465673 ARHGEF28Q8N1W1 1705 aaKnown RBP15.12■□□□□ 0.01
GPNMB-206ENST00000465673 PHRF1Q9P1Y6 1649 aaKnown RBP15.11■□□□□ 0.01
GPNMB-206ENST00000465673 CAMTA1Q9Y6Y1 1673 aa15.09■□□□□ 0.01
GPNMB-206ENST00000465673 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
GPNMB-206ENST00000465673 PDE3BQ13370 1112 aa15.09■□□□□ 0.01
GPNMB-206ENST00000465673 ABTB2Q8N961 1025 aa15.09■□□□□ 0.01
GPNMB-206ENST00000465673 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
GPNMB-206ENST00000465673 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
GPNMB-206ENST00000465673 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
GPNMB-206ENST00000465673 ITSN1Q15811 1721 aa15.08■□□□□ 0
GPNMB-206ENST00000465673 PLEKHG3A1L390 1219 aa15.07■□□□□ 0
GPNMB-206ENST00000465673 BARGINQ6ZT62 677 aa15.07■□□□□ 0
GPNMB-206ENST00000465673 TCP11L2Q8N4U5 519 aa15.06■□□□□ 0
GPNMB-206ENST00000465673 STAC3Q96MF2 364 aa15.06■□□□□ 0
GPNMB-206ENST00000465673 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
GPNMB-206ENST00000465673 NRKQ7Z2Y5 1582 aa15.05■□□□□ -0
GPNMB-206ENST00000465673 TOPAZ1Q8N9V7 1692 aa15.04■□□□□ -0
GPNMB-206ENST00000465673 USP19O94966 1318 aa15.04■□□□□ -0
GPNMB-206ENST00000465673 GCP02774 474 aa15.04■□□□□ -0
GPNMB-206ENST00000465673 CABP2Q9NPB3 220 aa15.04■□□□□ -0
GPNMB-206ENST00000465673 CPDO75976 1380 aa15.03■□□□□ -0
GPNMB-206ENST00000465673 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
GPNMB-206ENST00000465673 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
GPNMB-206ENST00000465673 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
GPNMB-206ENST00000465673 PTF1AQ7RTS3 328 aa15.02■□□□□ -0
GPNMB-206ENST00000465673 NLRP13Q86W25 1043 aa15.02■□□□□ -0
GPNMB-206ENST00000465673 PPIP5K1Q6PFW1 1433 aa15.01□□□□□ -0.01
GPNMB-206ENST00000465673 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
GPNMB-206ENST00000465673 RREB1Q92766 1687 aa15.01□□□□□ -0.01
GPNMB-206ENST00000465673 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
GPNMB-206ENST00000465673 NBPF14Q5TI25 921 aa15□□□□□ -0.01
GPNMB-206ENST00000465673 CABP1Q9NZU7 370 aa14.99□□□□□ -0.01
GPNMB-206ENST00000465673 THRAP3Q9Y2W1 955 aaKnown RBP14.99□□□□□ -0.01
GPNMB-206ENST00000465673 NLRP6P59044 892 aa14.98□□□□□ -0.01
GPNMB-206ENST00000465673 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-206ENST00000465673 PDGFDQ9GZP0 370 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-206ENST00000465673 AXIN2Q9Y2T1 843 aa14.97□□□□□ -0.01
GPNMB-206ENST00000465673 CRB1P82279 1406 aa14.97□□□□□ -0.01
GPNMB-206ENST00000465673 YY1P25490 414 aa14.96□□□□□ -0.01
GPNMB-206ENST00000465673 SPON1Q9HCB6 807 aa14.96□□□□□ -0.01
GPNMB-206ENST00000465673 ANO8Q9HCE9 1232 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-206ENST00000465673 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-206ENST00000465673 PARP4Q9UKK3 1724 aaKnown RBP14.95□□□□□ -0.02
GPNMB-206ENST00000465673 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
GPNMB-206ENST00000465673 USP6P35125 1406 aa14.95□□□□□ -0.02
GPNMB-206ENST00000465673 KCNQ2O43526 872 aa14.95□□□□□ -0.02
GPNMB-206ENST00000465673 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
GPNMB-206ENST00000465673 SOX12O15370 315 aa14.94□□□□□ -0.02
GPNMB-206ENST00000465673 DDB1Q16531 1140 aa14.94□□□□□ -0.02
GPNMB-206ENST00000465673 PROM2Q8N271 834 aa14.94□□□□□ -0.02
GPNMB-206ENST00000465673 AATKQ6ZMQ8 1374 aa14.94□□□□□ -0.02
GPNMB-206ENST00000465673 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
GPNMB-206ENST00000465673 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
GPNMB-206ENST00000465673 OVOS2A0A0J9YW53 1432 aa14.93□□□□□ -0.02
GPNMB-206ENST00000465673 OVOS2Q6IE36 1432 aa14.93□□□□□ -0.02
GPNMB-206ENST00000465673 MARCH10Q8NA82 808 aaPredicted RBP14.93□□□□□ -0.02
GPNMB-206ENST00000465673 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
GPNMB-206ENST00000465673 SLIT3O75094 1523 aa14.92□□□□□ -0.02
GPNMB-206ENST00000465673 QRICH2Q9H0J4 1663 aa14.91□□□□□ -0.02
GPNMB-206ENST00000465673 PLSCR1O15162 318 aa14.91□□□□□ -0.02
GPNMB-206ENST00000465673 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
GPNMB-206ENST00000465673 COL18A1P39060 1754 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms