RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
CMTM1-207ENST00000465057 EFCAB2Q5VUJ9 269 aa8.84□□□□□ -0.99
CMTM1-207ENST00000465057 PXYLP1Q8TE99 480 aa8.84□□□□□ -0.99
CMTM1-207ENST00000465057 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
CMTM1-207ENST00000465057 KIDINS220Q9ULH0 1771 aa8.84□□□□□ -1
CMTM1-207ENST00000465057 ATP10AO60312 1499 aa8.83□□□□□ -1
CMTM1-207ENST00000465057 ITGBL1O95965 494 aaPredicted RBP8.83□□□□□ -1
CMTM1-207ENST00000465057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
CMTM1-207ENST00000465057 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
CMTM1-207ENST00000465057 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 C3P01024 1663 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
CMTM1-207ENST00000465057 RNF40O75150 1001 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 SLC4A3P48751 1232 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 NECTIN2Q92692 538 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 REREQ9P2R6 1566 aa8.82□□□□□ -1
CMTM1-207ENST00000465057 TRAPPC8Q9Y2L5 1435 aa8.81□□□□□ -1
CMTM1-207ENST00000465057 HSPA2P54652 639 aa8.81□□□□□ -1
CMTM1-207ENST00000465057 METTL3Q86U44 580 aaKnown RBP8.81□□□□□ -1
CMTM1-207ENST00000465057 AFAP1Q8N556 730 aa8.81□□□□□ -1
CMTM1-207ENST00000465057 BCANQ96GW7 911 aa8.81□□□□□ -1
CMTM1-207ENST00000465057 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
CMTM1-207ENST00000465057 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
CMTM1-207ENST00000465057 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
CMTM1-207ENST00000465057 STRCQ7RTU9 1775 aa8.78□□□□□ -1
CMTM1-207ENST00000465057 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
CMTM1-207ENST00000465057 APLP1P51693 650 aa8.78□□□□□ -1
CMTM1-207ENST00000465057 KCNC4Q03721 635 aa8.78□□□□□ -1
CMTM1-207ENST00000465057 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
CMTM1-207ENST00000465057 INO80Q9ULG1 1556 aaPredicted RBP8.77□□□□□ -1.01
CMTM1-207ENST00000465057 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1.01
CMTM1-207ENST00000465057 AGLP35573 1532 aa8.76□□□□□ -1.01
CMTM1-207ENST00000465057 GPATCH8Q9UKJ3 1502 aaKnown RBP8.76□□□□□ -1.01
CMTM1-207ENST00000465057 CLTCQ00610 1675 aaKnown RBP8.76□□□□□ -1.01
CMTM1-207ENST00000465057 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CMTM1-207ENST00000465057 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
CMTM1-207ENST00000465057 ZNF777Q9ULD5 760 aaPredicted RBP8.76□□□□□ -1.01
CMTM1-207ENST00000465057 MROH2AA6NES4 1674 aa8.75□□□□□ -1.01
CMTM1-207ENST00000465057 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
CMTM1-207ENST00000465057 EHBP1L1Q8N3D4 1523 aa8.75□□□□□ -1.01
CMTM1-207ENST00000465057 MAP2K5Q13163 448 aa8.75□□□□□ -1.01
CMTM1-207ENST00000465057 ADGBQ8N7X0 1667 aa8.75□□□□□ -1.01
CMTM1-207ENST00000465057 A0A0G2JS52 829 aa8.74□□□□□ -1.01
CMTM1-207ENST00000465057 FBXO41Q8TF61 875 aa8.74□□□□□ -1.01
CMTM1-207ENST00000465057 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
CMTM1-207ENST00000465057 MTRQ99707 1265 aa8.74□□□□□ -1.01
CMTM1-207ENST00000465057 PRR14Q9BWN1 585 aa8.74□□□□□ -1.01
CMTM1-207ENST00000465057 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-207ENST00000465057 MINK1Q8N4C8 1332 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-207ENST00000465057 PLXNC1O60486 1568 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 CEP162Q5TB80 1403 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 UHRF1BP1Q6BDS2 1440 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 IRF6O14896 467 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 SLC10A3P09131 477 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 IL21Q9HBE4 155 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 MTUS2Q5JR59 1369 aa8.73□□□□□ -1.01
CMTM1-207ENST00000465057 HNRNPMP52272 730 aaKnown RBP eCLIP8.72□□□□□ -1.01
CMTM1-207ENST00000465057 CCNB3Q8WWL7 1395 aa8.72□□□□□ -1.01
CMTM1-207ENST00000465057 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
CMTM1-207ENST00000465057 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
CMTM1-207ENST00000465057 MYO3AQ8NEV4 1616 aa8.71□□□□□ -1.02
CMTM1-207ENST00000465057 SPAG9O60271 1321 aaKnown RBP8.71□□□□□ -1.02
CMTM1-207ENST00000465057 ZNF142P52746 1687 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-207ENST00000465057 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
CMTM1-207ENST00000465057 CFHP08603 1231 aa8.7□□□□□ -1.02
CMTM1-207ENST00000465057 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
CMTM1-207ENST00000465057 PLEKHH2Q8IVE3 1493 aa8.7□□□□□ -1.02
CMTM1-207ENST00000465057 RGS20O76081 388 aa8.69□□□□□ -1.02
CMTM1-207ENST00000465057 ZNF516Q92618 1163 aa8.69□□□□□ -1.02
CMTM1-207ENST00000465057 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
CMTM1-207ENST00000465057 CFDP1Q9UEE9 299 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-207ENST00000465057 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
CMTM1-207ENST00000465057 KIAA1107Q9UPP5 1409 aa8.69□□□□□ -1.02
CMTM1-207ENST00000465057 A2MP01023 1474 aa8.69□□□□□ -1.02
CMTM1-207ENST00000465057 COPS2P61201 443 aa8.68□□□□□ -1.02
CMTM1-207ENST00000465057 ZC3H15Q8WU90 426 aaKnown RBP8.68□□□□□ -1.02
CMTM1-207ENST00000465057 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-207ENST00000465057 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
CMTM1-207ENST00000465057 CAMSAP1Q5T5Y3 1602 aa8.68□□□□□ -1.02
CMTM1-207ENST00000465057 ZMYND10O75800 440 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 CAMSAP2Q08AD1 1489 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 MBD5Q9P267 1494 aa8.67□□□□□ -1.02
CMTM1-207ENST00000465057 CEP170BQ9Y4F5 1589 aaPredicted RBP8.66□□□□□ -1.02
CMTM1-207ENST00000465057 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
CMTM1-207ENST00000465057 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
CMTM1-207ENST00000465057 NCOA1Q15788 1441 aa8.65□□□□□ -1.02
CMTM1-207ENST00000465057 ZPR1O75312 459 aa8.65□□□□□ -1.02
CMTM1-207ENST00000465057 BLOC1S3Q6QNY0 202 aa8.65□□□□□ -1.02
CMTM1-207ENST00000465057 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
CMTM1-207ENST00000465057 POLR1AO95602 1720 aaPredicted RBP8.65□□□□□ -1.03
CMTM1-207ENST00000465057 CCDC141Q6ZP82 1450 aa8.64□□□□□ -1.03
CMTM1-207ENST00000465057 NPATQ14207 1427 aa8.64□□□□□ -1.03
CMTM1-207ENST00000465057 ZMYM3Q14202 1370 aa8.64□□□□□ -1.03
CMTM1-207ENST00000465057 GGT6Q6P531 493 aa8.64□□□□□ -1.03
CMTM1-207ENST00000465057 KRI1Q8N9T8 703 aaKnown RBP8.64□□□□□ -1.03
CMTM1-207ENST00000465057 LTBP4Q8N2S1 1624 aa8.64□□□□□ -1.03
CMTM1-207ENST00000465057 PTPRTO14522 1441 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms