RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 SIN3AQ96ST3 1273 aa19.88■□□□□ 0.77
RPP40-203ENST00000464646 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
RPP40-203ENST00000464646 NWD2Q9ULI1 1742 aa19.88■□□□□ 0.77
RPP40-203ENST00000464646 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
RPP40-203ENST00000464646 ACEP12821 1306 aa19.86■□□□□ 0.77
RPP40-203ENST00000464646 CENPJQ9HC77 1338 aaPredicted RBP19.86■□□□□ 0.77
RPP40-203ENST00000464646 CCDC61Q9Y6R9 512 aa19.86■□□□□ 0.77
RPP40-203ENST00000464646 ALS2Q96Q42 1657 aa19.86■□□□□ 0.77
RPP40-203ENST00000464646 ATP7BP35670 1465 aa19.86■□□□□ 0.77
RPP40-203ENST00000464646 BRWD3Q6RI45 1802 aa19.86■□□□□ 0.77
RPP40-203ENST00000464646 FAM98CQ17RN3 349 aaKnown RBP19.85■□□□□ 0.77
RPP40-203ENST00000464646 CCDC125Q86Z20 511 aa19.85■□□□□ 0.77
RPP40-203ENST00000464646 L3MBTL2Q969R5 705 aa19.85■□□□□ 0.77
RPP40-203ENST00000464646 ZC3H6P61129 1189 aaKnown RBP19.84■□□□□ 0.77
RPP40-203ENST00000464646 KRT27Q7Z3Y8 459 aa19.84■□□□□ 0.77
RPP40-203ENST00000464646 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
RPP40-203ENST00000464646 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
RPP40-203ENST00000464646 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
RPP40-203ENST00000464646 ZBTB7CA1YPR0 619 aa19.83■□□□□ 0.77
RPP40-203ENST00000464646 CHRNA2Q15822 529 aa19.83■□□□□ 0.77
RPP40-203ENST00000464646 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.77
RPP40-203ENST00000464646 ABTB2Q8N961 1025 aa19.83■□□□□ 0.77
RPP40-203ENST00000464646 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
RPP40-203ENST00000464646 EVA1CP58658 441 aa19.81■□□□□ 0.76
RPP40-203ENST00000464646 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
RPP40-203ENST00000464646 KIAA0232Q92628 1395 aa19.79■□□□□ 0.76
RPP40-203ENST00000464646 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
RPP40-203ENST00000464646 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
RPP40-203ENST00000464646 DEFB132Q7Z7B7 95 aa19.78■□□□□ 0.76
RPP40-203ENST00000464646 NRAPQ86VF7 1730 aa19.78■□□□□ 0.76
RPP40-203ENST00000464646 BLMP54132 1417 aaPredicted RBP19.77■□□□□ 0.76
RPP40-203ENST00000464646 PLEKHG3A1L390 1219 aa19.77■□□□□ 0.76
RPP40-203ENST00000464646 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
RPP40-203ENST00000464646 TOPAZ1Q8N9V7 1692 aa19.76■□□□□ 0.75
RPP40-203ENST00000464646 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
RPP40-203ENST00000464646 FAM182BQ5T319 152 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 CABP1Q9NZU7 370 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 PHRF1Q9P1Y6 1649 aaKnown RBP19.75■□□□□ 0.75
RPP40-203ENST00000464646 SPATA31A5Q5VU36 1347 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 EVC2Q86UK5 1308 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 SPATA31A7Q8IWB4 1347 aa19.75■□□□□ 0.75
RPP40-203ENST00000464646 CRYBG1Q9Y4K1 1723 aa19.74■□□□□ 0.75
RPP40-203ENST00000464646 ONECUT3O60422 494 aaPredicted RBP19.74■□□□□ 0.75
RPP40-203ENST00000464646 BAG6P46379 1132 aa19.72■□□□□ 0.75
RPP40-203ENST00000464646 NLRP6P59044 892 aa19.71■□□□□ 0.75
RPP40-203ENST00000464646 TRPM1Q7Z4N2 1603 aa19.71■□□□□ 0.75
RPP40-203ENST00000464646 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
RPP40-203ENST00000464646 SOX12O15370 315 aa19.68■□□□□ 0.74
RPP40-203ENST00000464646 GCP02774 474 aa19.68■□□□□ 0.74
RPP40-203ENST00000464646 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
RPP40-203ENST00000464646 TONSLQ96HA7 1378 aa19.67■□□□□ 0.74
RPP40-203ENST00000464646 LARP1Q6PKG0 1096 aaKnown RBP19.66■□□□□ 0.74
RPP40-203ENST00000464646 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
RPP40-203ENST00000464646 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
RPP40-203ENST00000464646 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
RPP40-203ENST00000464646 USP19O94966 1318 aa19.64■□□□□ 0.73
RPP40-203ENST00000464646 USP6P35125 1406 aa19.64■□□□□ 0.73
RPP40-203ENST00000464646 SSH2Q76I76 1423 aa19.64■□□□□ 0.73
RPP40-203ENST00000464646 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
RPP40-203ENST00000464646 BRD4O60885 1362 aaPredicted RBP19.62■□□□□ 0.73
RPP40-203ENST00000464646 PSDA5PKW4 1024 aaPredicted RBP19.62■□□□□ 0.73
RPP40-203ENST00000464646 TRIM37O94972 964 aa19.62■□□□□ 0.73
RPP40-203ENST00000464646 TMC1Q8TDI8 760 aa19.62■□□□□ 0.73
RPP40-203ENST00000464646 ZNF692Q9BU19 519 aaPredicted RBP19.62■□□□□ 0.73
RPP40-203ENST00000464646 FAM196AQ6ZSG2 479 aa19.61■□□□□ 0.73
RPP40-203ENST00000464646 RGPD1P0DJD0 1748 aa19.61■□□□□ 0.73
RPP40-203ENST00000464646 CAMTA1Q9Y6Y1 1673 aa19.61■□□□□ 0.73
RPP40-203ENST00000464646 CPDO75976 1380 aa19.6■□□□□ 0.73
RPP40-203ENST00000464646 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
RPP40-203ENST00000464646 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
RPP40-203ENST00000464646 TTC21BQ7Z4L5 1316 aa19.59■□□□□ 0.73
RPP40-203ENST00000464646 CSB-PGBD3P0DP91 1061 aa19.59■□□□□ 0.73
RPP40-203ENST00000464646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.59■□□□□ 0.73
RPP40-203ENST00000464646 EP400Q96L91 3159 aa19.59■□□□□ 0.73
RPP40-203ENST00000464646 KTN1Q86UP2 1357 aaKnown RBP19.58■□□□□ 0.73
RPP40-203ENST00000464646 APBA3O96018 575 aa19.58■□□□□ 0.72
RPP40-203ENST00000464646 BARGINQ6ZT62 677 aa19.58■□□□□ 0.72
RPP40-203ENST00000464646 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
RPP40-203ENST00000464646 EZH2Q15910 746 aaKnown RBP19.56■□□□□ 0.72
RPP40-203ENST00000464646 KCNH5Q8NCM2 988 aa19.56■□□□□ 0.72
RPP40-203ENST00000464646 THRAP3Q9Y2W1 955 aaKnown RBP19.56■□□□□ 0.72
RPP40-203ENST00000464646 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
RPP40-203ENST00000464646 LMO7Q8WWI1 1683 aa19.55■□□□□ 0.72
RPP40-203ENST00000464646 AKAP12Q02952 1782 aa19.55■□□□□ 0.72
RPP40-203ENST00000464646 COL5A2P05997 1499 aaPredicted RBP19.54■□□□□ 0.72
RPP40-203ENST00000464646 TTC21AQ8NDW8 1320 aa19.54■□□□□ 0.72
RPP40-203ENST00000464646 HDGFL2Q7Z4V5 671 aaPredicted RBP19.54■□□□□ 0.72
RPP40-203ENST00000464646 CRB1P82279 1406 aa19.53■□□□□ 0.72
RPP40-203ENST00000464646 SLIT3O75094 1523 aa19.52■□□□□ 0.72
RPP40-203ENST00000464646 R3HDM1Q15032 1099 aaKnown RBP19.52■□□□□ 0.72
RPP40-203ENST00000464646 AATKQ6ZMQ8 1374 aa19.52■□□□□ 0.72
RPP40-203ENST00000464646 DDB1Q16531 1140 aa19.51■□□□□ 0.71
RPP40-203ENST00000464646 AXIN2Q9Y2T1 843 aa19.5■□□□□ 0.71
RPP40-203ENST00000464646 TNS1Q9HBL0 1735 aaKnown RBP19.5■□□□□ 0.71
RPP40-203ENST00000464646 RGPD5Q99666 1765 aa19.49■□□□□ 0.71
RPP40-203ENST00000464646 SLC12A5Q9H2X9 1139 aa19.49■□□□□ 0.71
RPP40-203ENST00000464646 CPSF1Q10570 1443 aaKnown RBP19.49■□□□□ 0.71
RPP40-203ENST00000464646 ARHGEF25Q86VW2 580 aa19.48■□□□□ 0.71
RPP40-203ENST00000464646 NME9Q86XW9 330 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms