RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 CRIPAKQ8N1N5 446 aa9.87□□□□□ -0.83
USP25-207ENST00000464435 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP25-207ENST00000464435 PTCRAQ6ISU1 281 aaPredicted RBP9.86□□□□□ -0.83
USP25-207ENST00000464435 UNC93B1Q9H1C4 597 aa9.85□□□□□ -0.83
USP25-207ENST00000464435 TOR4AQ9NXH8 423 aa9.85□□□□□ -0.83
USP25-207ENST00000464435 AVPP01185 164 aa9.84□□□□□ -0.83
USP25-207ENST00000464435 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
USP25-207ENST00000464435 CYP4X1Q8N118 509 aa9.84□□□□□ -0.83
USP25-207ENST00000464435 GMPR2Q9P2T1 348 aaKnown RBP9.84□□□□□ -0.83
USP25-207ENST00000464435 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
USP25-207ENST00000464435 F12P00748 615 aaPredicted RBP9.83□□□□□ -0.84
USP25-207ENST00000464435 CTHP32929 405 aa9.82□□□□□ -0.84
USP25-207ENST00000464435 RC3H1Q5TC82 1133 aaKnown RBP9.82□□□□□ -0.84
USP25-207ENST00000464435 ARMC2Q8NEN0 867 aa9.82□□□□□ -0.84
USP25-207ENST00000464435 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
USP25-207ENST00000464435 PCMTD1Q96MG8 357 aaPredicted RBP9.82□□□□□ -0.84
USP25-207ENST00000464435 AXIN1O15169 862 aa9.81□□□□□ -0.84
USP25-207ENST00000464435 WFS1O76024 890 aa9.81□□□□□ -0.84
USP25-207ENST00000464435 SKOR1P84550 965 aa9.81□□□□□ -0.84
USP25-207ENST00000464435 PROCA1Q8NCQ7 364 aaPredicted RBP9.81□□□□□ -0.84
USP25-207ENST00000464435 C11orf95C9JLR9 678 aaPredicted RBP9.8□□□□□ -0.84
USP25-207ENST00000464435 TSC1Q92574 1164 aa9.8□□□□□ -0.84
USP25-207ENST00000464435 MRGPRX2Q96LB1 330 aa9.8□□□□□ -0.84
USP25-207ENST00000464435 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
USP25-207ENST00000464435 PER1O15534 1290 aaPredicted RBP9.79□□□□□ -0.84
USP25-207ENST00000464435 SH3BP2P78314 561 aa9.79□□□□□ -0.84
USP25-207ENST00000464435 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
USP25-207ENST00000464435 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
USP25-207ENST00000464435 CTC1Q2NKJ3 1217 aa9.78□□□□□ -0.84
USP25-207ENST00000464435 ZNF511Q8NB15 262 aa9.78□□□□□ -0.84
USP25-207ENST00000464435 SMCPP49901 116 aaPredicted RBP9.77□□□□□ -0.85
USP25-207ENST00000464435 NFX1Q12986 1120 aaKnown RBP9.77□□□□□ -0.85
USP25-207ENST00000464435 MPNDQ8N594 471 aa9.77□□□□□ -0.85
USP25-207ENST00000464435 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.85
USP25-207ENST00000464435 BAP1Q92560 729 aa9.77□□□□□ -0.85
USP25-207ENST00000464435 VARSP26640 1264 aaKnown RBP9.76□□□□□ -0.85
USP25-207ENST00000464435 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.85
USP25-207ENST00000464435 MAP10Q9P2G4 905 aa9.76□□□□□ -0.85
USP25-207ENST00000464435 SIAH2O43255 324 aa9.75□□□□□ -0.85
USP25-207ENST00000464435 CTDSPL2Q05D32 466 aa9.75□□□□□ -0.85
USP25-207ENST00000464435 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
USP25-207ENST00000464435 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
USP25-207ENST00000464435 RFC5P40937 340 aa9.73□□□□□ -0.85
USP25-207ENST00000464435 SMPD1P17405 629 aa9.72□□□□□ -0.85
USP25-207ENST00000464435 LINC01559Q495D7 138 aa9.72□□□□□ -0.85
USP25-207ENST00000464435 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
USP25-207ENST00000464435 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
USP25-207ENST00000464435 WIPF1O43516 503 aa9.71□□□□□ -0.86
USP25-207ENST00000464435 AP1G2O75843 785 aa9.71□□□□□ -0.86
USP25-207ENST00000464435 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
USP25-207ENST00000464435 PNMA1Q8ND90 353 aa9.71□□□□□ -0.86
USP25-207ENST00000464435 FAM174AQ8TBP5 190 aa9.71□□□□□ -0.86
USP25-207ENST00000464435 STK17AQ9UEE5 414 aa9.71□□□□□ -0.86
USP25-207ENST00000464435 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
USP25-207ENST00000464435 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
USP25-207ENST00000464435 ATP13A2Q9NQ11 1180 aa9.69□□□□□ -0.86
USP25-207ENST00000464435 J3QL48 77 aa9.68□□□□□ -0.86
USP25-207ENST00000464435 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
USP25-207ENST00000464435 PDXDC2PQ6P474 469 aa9.68□□□□□ -0.86
USP25-207ENST00000464435 LRRN4Q8WUT4 740 aa9.68□□□□□ -0.86
USP25-207ENST00000464435 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
USP25-207ENST00000464435 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
USP25-207ENST00000464435 SH3RF1Q7Z6J0 888 aa9.67□□□□□ -0.86
USP25-207ENST00000464435 BANK1Q8NDB2 785 aa9.67□□□□□ -0.86
USP25-207ENST00000464435 CDK15Q96Q40 435 aa9.67□□□□□ -0.86
USP25-207ENST00000464435 FKBPLQ9UIM3 349 aa9.67□□□□□ -0.86
USP25-207ENST00000464435 SOCS7O14512 581 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 AGERQ15109 404 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 GPSM3Q9Y4H4 160 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
USP25-207ENST00000464435 C1QTNF2Q9BXJ5 285 aa9.65□□□□□ -0.86
USP25-207ENST00000464435 TERTO14746 1132 aaKnown RBP9.64□□□□□ -0.87
USP25-207ENST00000464435 NR6A1Q15406 480 aa9.64□□□□□ -0.87
USP25-207ENST00000464435 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
USP25-207ENST00000464435 TRMT44Q8IYL2 757 aaKnown RBP9.64□□□□□ -0.87
USP25-207ENST00000464435 TRIM47Q96LD4 638 aa9.64□□□□□ -0.87
USP25-207ENST00000464435 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
USP25-207ENST00000464435 HPS1Q92902 700 aa9.62□□□□□ -0.87
USP25-207ENST00000464435 MAP4K5Q9Y4K4 846 aa9.62□□□□□ -0.87
USP25-207ENST00000464435 ADH1CP00326 375 aa9.61□□□□□ -0.87
USP25-207ENST00000464435 PTK2Q05397 1052 aa9.61□□□□□ -0.87
USP25-207ENST00000464435 NR5A1Q13285 461 aa9.61□□□□□ -0.87
USP25-207ENST00000464435 SENP2Q9HC62 589 aa9.61□□□□□ -0.87
USP25-207ENST00000464435 CDV3Q9UKY7 258 aaKnown RBP9.61□□□□□ -0.87
USP25-207ENST00000464435 APBB1O00213 710 aa9.6□□□□□ -0.87
USP25-207ENST00000464435 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
USP25-207ENST00000464435 ARHGAP9Q9BRR9 750 aa9.59□□□□□ -0.87
USP25-207ENST00000464435 HMX1Q9NP08 348 aaPredicted RBP9.59□□□□□ -0.87
USP25-207ENST00000464435 MAGEB6P1A0A0J9YX57 407 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 NNTQ13423 1086 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 ERFEQ4G0M1 354 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 ERICH6Q7L0X2 663 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 ZBTB33Q86T24 672 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 TRIM34Q9BYJ4 488 aa9.57□□□□□ -0.88
USP25-207ENST00000464435 GRM5P41594 1212 aa9.56□□□□□ -0.88
USP25-207ENST00000464435 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
USP25-207ENST00000464435 KIFC2Q96AC6 838 aa9.56□□□□□ -0.88
USP25-207ENST00000464435 CAPN5O15484 640 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms