RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 RPGRIP1LQ68CZ1 1315 aa19.13■□□□□ 0.65
SNX17-205ENST00000464279 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
SNX17-205ENST00000464279 CASZ1Q86V15 1759 aa19.13■□□□□ 0.65
SNX17-205ENST00000464279 PDE3BQ13370 1112 aa19.12■□□□□ 0.65
SNX17-205ENST00000464279 SYT17Q9BSW7 474 aa19.11■□□□□ 0.65
SNX17-205ENST00000464279 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
SNX17-205ENST00000464279 ZBTB7AO95365 584 aa19.1■□□□□ 0.65
SNX17-205ENST00000464279 PTGER2P43116 358 aa19.1■□□□□ 0.65
SNX17-205ENST00000464279 PRDM11Q9NQV5 511 aa19.1■□□□□ 0.65
SNX17-205ENST00000464279 ANO8Q9HCE9 1232 aaPredicted RBP19.09■□□□□ 0.65
SNX17-205ENST00000464279 ABCC11Q96J66 1382 aa19.08■□□□□ 0.65
SNX17-205ENST00000464279 DLC1Q96QB1 1528 aa19.08■□□□□ 0.64
SNX17-205ENST00000464279 KNDC1Q76NI1 1749 aa19.06■□□□□ 0.64
SNX17-205ENST00000464279 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
SNX17-205ENST00000464279 PDGFDQ9GZP0 370 aaPredicted RBP19.06■□□□□ 0.64
SNX17-205ENST00000464279 PPLO60437 1756 aa19.06■□□□□ 0.64
SNX17-205ENST00000464279 ATF5Q9Y2D1 282 aaPredicted RBP19.05■□□□□ 0.64
SNX17-205ENST00000464279 RGPD3A6NKT7 1758 aaPredicted RBP19.04■□□□□ 0.64
SNX17-205ENST00000464279 RGPD8O14715 1765 aaPredicted RBP19.04■□□□□ 0.64
SNX17-205ENST00000464279 RGPD4Q7Z3J3 1758 aa19.04■□□□□ 0.64
SNX17-205ENST00000464279 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
SNX17-205ENST00000464279 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
SNX17-205ENST00000464279 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
SNX17-205ENST00000464279 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
SNX17-205ENST00000464279 ALS2Q96Q42 1657 aa19.02■□□□□ 0.64
SNX17-205ENST00000464279 C11orf95C9JLR9 678 aaPredicted RBP19.01■□□□□ 0.63
SNX17-205ENST00000464279 PMFBP1Q8TBY8 1022 aa19.01■□□□□ 0.63
SNX17-205ENST00000464279 PLSCR1O15162 318 aa19■□□□□ 0.63
SNX17-205ENST00000464279 BCL11BQ9C0K0 894 aaPredicted RBP19■□□□□ 0.63
SNX17-205ENST00000464279 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
SNX17-205ENST00000464279 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
SNX17-205ENST00000464279 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
SNX17-205ENST00000464279 ANKARQ7Z5J8 1434 aa18.99■□□□□ 0.63
SNX17-205ENST00000464279 ADGRF5Q8IZF2 1346 aa18.99■□□□□ 0.63
SNX17-205ENST00000464279 MAP3K5Q99683 1374 aa18.98■□□□□ 0.63
SNX17-205ENST00000464279 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
SNX17-205ENST00000464279 GPR162Q16538 588 aa18.98■□□□□ 0.63
SNX17-205ENST00000464279 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
SNX17-205ENST00000464279 YTHDC2Q9H6S0 1430 aaKnown RBP18.98■□□□□ 0.63
SNX17-205ENST00000464279 MTFR1LQ9H019 292 aa18.97■□□□□ 0.63
SNX17-205ENST00000464279 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
SNX17-205ENST00000464279 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
SNX17-205ENST00000464279 SGIP1Q9BQI5 828 aa18.96■□□□□ 0.63
SNX17-205ENST00000464279 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
SNX17-205ENST00000464279 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
SNX17-205ENST00000464279 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
SNX17-205ENST00000464279 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
SNX17-205ENST00000464279 SIRT1Q96EB6 747 aa18.95■□□□□ 0.62
SNX17-205ENST00000464279 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
SNX17-205ENST00000464279 ARXQ96QS3 562 aa18.94■□□□□ 0.62
SNX17-205ENST00000464279 STK32BQ9NY57 414 aa18.94■□□□□ 0.62
SNX17-205ENST00000464279 HSPA6P17066 643 aa18.93■□□□□ 0.62
SNX17-205ENST00000464279 EVA1CP58658 441 aa18.93■□□□□ 0.62
SNX17-205ENST00000464279 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
SNX17-205ENST00000464279 LARP1Q6PKG0 1096 aaKnown RBP18.9■□□□□ 0.62
SNX17-205ENST00000464279 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
SNX17-205ENST00000464279 PARP4Q9UKK3 1724 aaKnown RBP18.9■□□□□ 0.62
SNX17-205ENST00000464279 PEAK1Q9H792 1746 aa18.89■□□□□ 0.61
SNX17-205ENST00000464279 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
SNX17-205ENST00000464279 PROM2Q8N271 834 aa18.89■□□□□ 0.61
SNX17-205ENST00000464279 ANKRD30BQ9BXX2 1392 aa18.89■□□□□ 0.61
SNX17-205ENST00000464279 PIK3C2GO75747 1445 aa18.89■□□□□ 0.61
SNX17-205ENST00000464279 ITGAEP38570 1179 aa18.88■□□□□ 0.61
SNX17-205ENST00000464279 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
SNX17-205ENST00000464279 SAFB2Q14151 953 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNX17-205ENST00000464279 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
SNX17-205ENST00000464279 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
SNX17-205ENST00000464279 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
SNX17-205ENST00000464279 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
SNX17-205ENST00000464279 ATP7BP35670 1465 aa18.85■□□□□ 0.61
SNX17-205ENST00000464279 EIF3AQ14152 1382 aaKnown RBP18.84■□□□□ 0.61
SNX17-205ENST00000464279 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
SNX17-205ENST00000464279 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
SNX17-205ENST00000464279 NGDNQ8NEJ9 315 aaKnown RBP18.84■□□□□ 0.61
SNX17-205ENST00000464279 ATP10DQ9P241 1426 aa18.83■□□□□ 0.61
SNX17-205ENST00000464279 SBF2Q86WG5 1849 aa18.83■□□□□ 0.6
SNX17-205ENST00000464279 PRR36Q9H6K5 1346 aa18.81■□□□□ 0.6
SNX17-205ENST00000464279 KLHL34Q8N239 644 aa18.81■□□□□ 0.6
SNX17-205ENST00000464279 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
SNX17-205ENST00000464279 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
SNX17-205ENST00000464279 LMO7Q8WWI1 1683 aa18.8■□□□□ 0.6
SNX17-205ENST00000464279 RGL3Q3MIN7 710 aa18.8■□□□□ 0.6
SNX17-205ENST00000464279 GPBP1L1Q9HC44 474 aaPredicted RBP18.8■□□□□ 0.6
SNX17-205ENST00000464279 POGKQ9P215 609 aa18.8■□□□□ 0.6
SNX17-205ENST00000464279 DDB1Q16531 1140 aa18.79■□□□□ 0.6
SNX17-205ENST00000464279 AATKQ6ZMQ8 1374 aa18.79■□□□□ 0.6
SNX17-205ENST00000464279 SPATA31E1Q6ZUB1 1445 aa18.78■□□□□ 0.6
SNX17-205ENST00000464279 CAPN15O75808 1086 aa18.78■□□□□ 0.6
SNX17-205ENST00000464279 CPDO75976 1380 aa18.78■□□□□ 0.6
SNX17-205ENST00000464279 BCL9O00512 1426 aa18.77■□□□□ 0.6
SNX17-205ENST00000464279 CRB1P82279 1406 aa18.77■□□□□ 0.6
SNX17-205ENST00000464279 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
SNX17-205ENST00000464279 NUTM2GQ5VZR2 741 aa18.77■□□□□ 0.6
SNX17-205ENST00000464279 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.59
SNX17-205ENST00000464279 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
SNX17-205ENST00000464279 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
SNX17-205ENST00000464279 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
SNX17-205ENST00000464279 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
SNX17-205ENST00000464279 POLD1P28340 1107 aa18.73■□□□□ 0.59
SNX17-205ENST00000464279 MARCH10Q8NA82 808 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms