RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 NCOA3Q9Y6Q9 1424 aa19.37■□□□□ 0.69
COL5A1-205ENST00000464187 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
COL5A1-205ENST00000464187 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
COL5A1-205ENST00000464187 ITSN1Q15811 1721 aa19.36■□□□□ 0.69
COL5A1-205ENST00000464187 USP6P35125 1406 aa19.35■□□□□ 0.69
COL5A1-205ENST00000464187 BLMP54132 1417 aaPredicted RBP19.35■□□□□ 0.69
COL5A1-205ENST00000464187 RGPD8O14715 1765 aaPredicted RBP19.35■□□□□ 0.69
COL5A1-205ENST00000464187 AKAP12Q02952 1782 aa19.35■□□□□ 0.69
COL5A1-205ENST00000464187 INSRP06213 1382 aa19.34■□□□□ 0.69
COL5A1-205ENST00000464187 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
COL5A1-205ENST00000464187 NME9Q86XW9 330 aa19.34■□□□□ 0.69
COL5A1-205ENST00000464187 ESCO1Q5FWF5 840 aa19.33■□□□□ 0.69
COL5A1-205ENST00000464187 PHF8Q9UPP1 1060 aa19.33■□□□□ 0.69
COL5A1-205ENST00000464187 TTC21BQ7Z4L5 1316 aa19.33■□□□□ 0.68
COL5A1-205ENST00000464187 ATF3P18847 181 aa19.32■□□□□ 0.68
COL5A1-205ENST00000464187 DCCP43146 1447 aa19.31■□□□□ 0.68
COL5A1-205ENST00000464187 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
COL5A1-205ENST00000464187 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
COL5A1-205ENST00000464187 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
COL5A1-205ENST00000464187 MSH6P52701 1360 aa19.3■□□□□ 0.68
COL5A1-205ENST00000464187 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
COL5A1-205ENST00000464187 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
COL5A1-205ENST00000464187 ZRANB1Q9UGI0 708 aa19.3■□□□□ 0.68
COL5A1-205ENST00000464187 KIF20BQ96Q89 1820 aa19.29■□□□□ 0.68
COL5A1-205ENST00000464187 NRKQ7Z2Y5 1582 aa19.29■□□□□ 0.68
COL5A1-205ENST00000464187 MTHFSP49914 203 aa19.29■□□□□ 0.68
COL5A1-205ENST00000464187 CADPS2Q86UW7 1296 aa19.29■□□□□ 0.68
COL5A1-205ENST00000464187 C1orf167Q5SNV9 1468 aa19.28■□□□□ 0.68
COL5A1-205ENST00000464187 COG3Q96JB2 828 aa19.28■□□□□ 0.68
COL5A1-205ENST00000464187 ANKRD26Q9UPS8 1709 aa19.28■□□□□ 0.68
COL5A1-205ENST00000464187 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
COL5A1-205ENST00000464187 MST1RQ04912 1400 aa19.26■□□□□ 0.67
COL5A1-205ENST00000464187 FOXO3O43524 673 aa19.24■□□□□ 0.67
COL5A1-205ENST00000464187 PSME1Q06323 249 aa19.24■□□□□ 0.67
COL5A1-205ENST00000464187 FBLN1P23142 703 aa19.23■□□□□ 0.67
COL5A1-205ENST00000464187 WDR43Q15061 677 aaKnown RBP eCLIP19.23■□□□□ 0.67
COL5A1-205ENST00000464187 OVOS2A0A0J9YW53 1432 aa19.23■□□□□ 0.67
COL5A1-205ENST00000464187 OVOS2Q6IE36 1432 aa19.23■□□□□ 0.67
COL5A1-205ENST00000464187 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
COL5A1-205ENST00000464187 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
COL5A1-205ENST00000464187 XIRP1Q702N8 1843 aaKnown RBP19.23■□□□□ 0.67
COL5A1-205ENST00000464187 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
COL5A1-205ENST00000464187 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
COL5A1-205ENST00000464187 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
COL5A1-205ENST00000464187 AATKQ6ZMQ8 1374 aa19.21■□□□□ 0.67
COL5A1-205ENST00000464187 POLKQ9UBT6 870 aa19.21■□□□□ 0.67
COL5A1-205ENST00000464187 ABTB2Q8N961 1025 aa19.2■□□□□ 0.66
COL5A1-205ENST00000464187 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
COL5A1-205ENST00000464187 NLRP6P59044 892 aa19.18■□□□□ 0.66
COL5A1-205ENST00000464187 XPCQ01831 940 aaPredicted RBP19.18■□□□□ 0.66
COL5A1-205ENST00000464187 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
COL5A1-205ENST00000464187 RRS1Q15050 365 aaKnown RBP19.17■□□□□ 0.66
COL5A1-205ENST00000464187 NUTM2GQ5VZR2 741 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 EMILIN1Q9Y6C2 1016 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 PNPLA6Q8IY17 1366 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 KIF1AQ12756 1690 aa19.17■□□□□ 0.66
COL5A1-205ENST00000464187 KRT28Q7Z3Y7 464 aa19.16■□□□□ 0.66
COL5A1-205ENST00000464187 SLAIN2Q9P270 581 aa19.16■□□□□ 0.66
COL5A1-205ENST00000464187 SOX12O15370 315 aa19.15■□□□□ 0.66
COL5A1-205ENST00000464187 CDCA7LQ96GN5 454 aa19.14■□□□□ 0.65
COL5A1-205ENST00000464187 COL3A1P02461 1466 aaPredicted RBP19.14■□□□□ 0.65
COL5A1-205ENST00000464187 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
COL5A1-205ENST00000464187 SHPRHQ149N8 1683 aa19.13■□□□□ 0.65
COL5A1-205ENST00000464187 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
COL5A1-205ENST00000464187 BRINP3Q76B58 766 aa19.13■□□□□ 0.65
COL5A1-205ENST00000464187 NPHP3Q7Z494 1330 aa19.13■□□□□ 0.65
COL5A1-205ENST00000464187 RRP1P56182 461 aaKnown RBP19.12■□□□□ 0.65
COL5A1-205ENST00000464187 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
COL5A1-205ENST00000464187 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
COL5A1-205ENST00000464187 MAP2P11137 1827 aaKnown RBP19.11■□□□□ 0.65
COL5A1-205ENST00000464187 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
COL5A1-205ENST00000464187 CDK12Q9NYV4 1490 aaPredicted RBP19.11■□□□□ 0.65
COL5A1-205ENST00000464187 CCDC146Q8IYE0 955 aa19.1■□□□□ 0.65
COL5A1-205ENST00000464187 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
COL5A1-205ENST00000464187 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
COL5A1-205ENST00000464187 LMOD2Q6P5Q4 547 aa19.09■□□□□ 0.65
COL5A1-205ENST00000464187 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
COL5A1-205ENST00000464187 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
COL5A1-205ENST00000464187 MAP3K19Q56UN5 1328 aa19.09■□□□□ 0.65
COL5A1-205ENST00000464187 USP54Q70EL1 1684 aa19.08■□□□□ 0.65
COL5A1-205ENST00000464187 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.64
COL5A1-205ENST00000464187 ZNF521Q96K83 1311 aa19.07■□□□□ 0.64
COL5A1-205ENST00000464187 MARF1Q9Y4F3 1742 aaKnown RBP19.06■□□□□ 0.64
COL5A1-205ENST00000464187 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
COL5A1-205ENST00000464187 IL13P35225 146 aa19.05■□□□□ 0.64
COL5A1-205ENST00000464187 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
COL5A1-205ENST00000464187 KCNH5Q8NCM2 988 aa19.05■□□□□ 0.64
COL5A1-205ENST00000464187 PXDNQ92626 1479 aa19.05■□□□□ 0.64
COL5A1-205ENST00000464187 AMPHP49418 695 aa19.04■□□□□ 0.64
COL5A1-205ENST00000464187 APAF1O14727 1248 aa19.04■□□□□ 0.64
COL5A1-205ENST00000464187 FLT4P35916 1363 aa19.03■□□□□ 0.64
COL5A1-205ENST00000464187 GCP02774 474 aa19.03■□□□□ 0.64
COL5A1-205ENST00000464187 RUNDC1Q96C34 613 aa19.03■□□□□ 0.64
COL5A1-205ENST00000464187 TNS3Q68CZ2 1445 aa19.03■□□□□ 0.64
COL5A1-205ENST00000464187 USP19O94966 1318 aa19.03■□□□□ 0.64
COL5A1-205ENST00000464187 PLEKHG5O94827 1062 aa19.02■□□□□ 0.64
COL5A1-205ENST00000464187 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.64
COL5A1-205ENST00000464187 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms