RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 MTMR2Q13614 643 aa8.74□□□□□ -1.01
USP9X-204ENST00000463829 C14orf37Q86TY3 774 aa8.74□□□□□ -1.01
USP9X-204ENST00000463829 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
USP9X-204ENST00000463829 MRGPRX2Q96LB1 330 aa8.74□□□□□ -1.01
USP9X-204ENST00000463829 JUNDP17535 347 aa8.73□□□□□ -1.01
USP9X-204ENST00000463829 RTL5Q5HYW3 569 aaPredicted RBP8.73□□□□□ -1.01
USP9X-204ENST00000463829 FBXO31Q5XUX0 539 aaPredicted RBP8.73□□□□□ -1.01
USP9X-204ENST00000463829 TIMELESSQ9UNS1 1208 aa8.73□□□□□ -1.01
USP9X-204ENST00000463829 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
USP9X-204ENST00000463829 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
USP9X-204ENST00000463829 SMPD1P17405 629 aa8.71□□□□□ -1.02
USP9X-204ENST00000463829 WNT7BP56706 349 aa8.71□□□□□ -1.02
USP9X-204ENST00000463829 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.02
USP9X-204ENST00000463829 RETREG3Q86VR2 466 aa8.71□□□□□ -1.02
USP9X-204ENST00000463829 GMPR2Q9P2T1 348 aaKnown RBP8.71□□□□□ -1.02
USP9X-204ENST00000463829 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
USP9X-204ENST00000463829 SYMPKQ92797 1274 aaKnown RBP8.7□□□□□ -1.02
USP9X-204ENST00000463829 NUDT12Q9BQG2 462 aa8.69□□□□□ -1.02
USP9X-204ENST00000463829 J3QL48 77 aa8.68□□□□□ -1.02
USP9X-204ENST00000463829 AP1G2O75843 785 aa8.68□□□□□ -1.02
USP9X-204ENST00000463829 MCM6Q14566 821 aa8.67□□□□□ -1.02
USP9X-204ENST00000463829 HELBQ8NG08 1087 aaPredicted RBP8.67□□□□□ -1.02
USP9X-204ENST00000463829 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
USP9X-204ENST00000463829 SENP2Q9HC62 589 aa8.67□□□□□ -1.02
USP9X-204ENST00000463829 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
USP9X-204ENST00000463829 TSC1Q92574 1164 aa8.66□□□□□ -1.02
USP9X-204ENST00000463829 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
USP9X-204ENST00000463829 ALDH1A1P00352 501 aa8.65□□□□□ -1.02
USP9X-204ENST00000463829 SKOR1P84550 965 aa8.65□□□□□ -1.02
USP9X-204ENST00000463829 CTDSPL2Q05D32 466 aa8.65□□□□□ -1.02
USP9X-204ENST00000463829 EHBP1Q8NDI1 1231 aa8.65□□□□□ -1.02
USP9X-204ENST00000463829 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
USP9X-204ENST00000463829 WFS1O76024 890 aa8.64□□□□□ -1.03
USP9X-204ENST00000463829 DESI1Q6ICB0 168 aa8.64□□□□□ -1.03
USP9X-204ENST00000463829 HPS1Q92902 700 aa8.64□□□□□ -1.03
USP9X-204ENST00000463829 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
USP9X-204ENST00000463829 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
USP9X-204ENST00000463829 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
USP9X-204ENST00000463829 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
USP9X-204ENST00000463829 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
USP9X-204ENST00000463829 WASF2Q9Y6W5 498 aa8.63□□□□□ -1.03
USP9X-204ENST00000463829 APBB1O00213 710 aa8.62□□□□□ -1.03
USP9X-204ENST00000463829 SOCS7O14512 581 aa8.62□□□□□ -1.03
USP9X-204ENST00000463829 PTCRAQ6ISU1 281 aaPredicted RBP8.62□□□□□ -1.03
USP9X-204ENST00000463829 PTPRNQ16849 979 aa8.61□□□□□ -1.03
USP9X-204ENST00000463829 MTMR14Q8NCE2 650 aa8.6□□□□□ -1.03
USP9X-204ENST00000463829 TRIM47Q96LD4 638 aa8.6□□□□□ -1.03
USP9X-204ENST00000463829 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
USP9X-204ENST00000463829 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
USP9X-204ENST00000463829 RAD21O60216 631 aa8.59□□□□□ -1.03
USP9X-204ENST00000463829 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
USP9X-204ENST00000463829 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
USP9X-204ENST00000463829 SH3BP2P78314 561 aa8.58□□□□□ -1.04
USP9X-204ENST00000463829 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
USP9X-204ENST00000463829 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
USP9X-204ENST00000463829 UNC93B1Q9H1C4 597 aa8.58□□□□□ -1.04
USP9X-204ENST00000463829 A6NJR5 290 aa8.57□□□□□ -1.04
USP9X-204ENST00000463829 PER1O15534 1290 aaPredicted RBP8.57□□□□□ -1.04
USP9X-204ENST00000463829 SIAH2O43255 324 aa8.57□□□□□ -1.04
USP9X-204ENST00000463829 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
USP9X-204ENST00000463829 CAPN5O15484 640 aaPredicted RBP8.56□□□□□ -1.04
USP9X-204ENST00000463829 BAP1Q92560 729 aa8.56□□□□□ -1.04
USP9X-204ENST00000463829 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
USP9X-204ENST00000463829 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
USP9X-204ENST00000463829 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
USP9X-204ENST00000463829 TERTO14746 1132 aaKnown RBP8.55□□□□□ -1.04
USP9X-204ENST00000463829 CTHP32929 405 aa8.55□□□□□ -1.04
USP9X-204ENST00000463829 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
USP9X-204ENST00000463829 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
USP9X-204ENST00000463829 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
USP9X-204ENST00000463829 VARSP26640 1264 aaKnown RBP8.54□□□□□ -1.04
USP9X-204ENST00000463829 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
USP9X-204ENST00000463829 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
USP9X-204ENST00000463829 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
USP9X-204ENST00000463829 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
USP9X-204ENST00000463829 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
USP9X-204ENST00000463829 GDPD2Q9HCC8 539 aa8.53□□□□□ -1.04
USP9X-204ENST00000463829 NR6A1Q15406 480 aa8.52□□□□□ -1.05
USP9X-204ENST00000463829 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
USP9X-204ENST00000463829 F12P00748 615 aaPredicted RBP8.51□□□□□ -1.05
USP9X-204ENST00000463829 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
USP9X-204ENST00000463829 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
USP9X-204ENST00000463829 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
USP9X-204ENST00000463829 EPS8L1Q8TE68 723 aa8.51□□□□□ -1.05
USP9X-204ENST00000463829 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
USP9X-204ENST00000463829 WIPF1O43516 503 aa8.5□□□□□ -1.05
USP9X-204ENST00000463829 ABL2P42684 1182 aa8.5□□□□□ -1.05
USP9X-204ENST00000463829 MPNDQ8N594 471 aa8.5□□□□□ -1.05
USP9X-204ENST00000463829 FAM174AQ8TBP5 190 aa8.5□□□□□ -1.05
USP9X-204ENST00000463829 TRAK2O60296 914 aa8.49□□□□□ -1.05
USP9X-204ENST00000463829 FNBP4Q8N3X1 1017 aaPredicted RBP8.49□□□□□ -1.05
USP9X-204ENST00000463829 STK17AQ9UEE5 414 aa8.49□□□□□ -1.05
USP9X-204ENST00000463829 TLL2Q9Y6L7 1015 aa8.49□□□□□ -1.05
USP9X-204ENST00000463829 BMP1P13497 986 aa8.48□□□□□ -1.05
USP9X-204ENST00000463829 NNTQ13423 1086 aa8.48□□□□□ -1.05
USP9X-204ENST00000463829 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
USP9X-204ENST00000463829 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
USP9X-204ENST00000463829 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
USP9X-204ENST00000463829 SCARF1Q14162 830 aa8.47□□□□□ -1.05
USP9X-204ENST00000463829 AGERQ15109 404 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms