RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
CHRNA4-202ENST00000463705 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
CHRNA4-202ENST00000463705 GNAI2P04899 355 aa16.27■□□□□ 0.2
CHRNA4-202ENST00000463705 NFXL1Q6ZNB6 911 aa16.27■□□□□ 0.2
CHRNA4-202ENST00000463705 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
CHRNA4-202ENST00000463705 KIF6Q6ZMV9 814 aa16.27■□□□□ 0.19
CHRNA4-202ENST00000463705 NOB1Q9ULX3 412 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 RALYLQ86SE5 291 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 NEUROD6Q96NK8 337 aa16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 SULT6B1Q6IMI4 303 aa16.26■□□□□ 0.19
CHRNA4-202ENST00000463705 FCHSD2O94868 740 aa16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 MCM2P49736 904 aa16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 GOLGA6L1Q8N7Z2 621 aa16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
CHRNA4-202ENST00000463705 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 ANKRD20A12PQ8NF67 263 aa16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 SURF6O75683 361 aaKnown RBP16.24■□□□□ 0.19
CHRNA4-202ENST00000463705 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
CHRNA4-202ENST00000463705 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 WASHC4Q2M389 1173 aa16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 CTDP1Q9Y5B0 961 aaPredicted RBP16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 TBC1D2BQ9UPU7 963 aa16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 PES1O00541 588 aaKnown RBP16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 PRKCSHP14314 528 aaPredicted RBP16.22■□□□□ 0.19
CHRNA4-202ENST00000463705 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.19
CHRNA4-202ENST00000463705 RABEP1Q15276 862 aa16.21■□□□□ 0.19
CHRNA4-202ENST00000463705 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
CHRNA4-202ENST00000463705 SLC4A2P04920 1241 aa16.21■□□□□ 0.18
CHRNA4-202ENST00000463705 CCDC73Q6ZRK6 1079 aa16.21■□□□□ 0.18
CHRNA4-202ENST00000463705 ZNF530Q6P9A1 599 aaPredicted RBP16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 TCEAL9Q9UHQ7 104 aa16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 SLFN5Q08AF3 891 aa16.2■□□□□ 0.18
CHRNA4-202ENST00000463705 SLC26A8Q96RN1 970 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 SRCIN1Q9C0H9 1055 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 XBP1P17861 261 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 CABP4P57796 275 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 SASS6Q6UVJ0 657 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 ABCC11Q96J66 1382 aa16.19■□□□□ 0.18
CHRNA4-202ENST00000463705 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
CHRNA4-202ENST00000463705 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
CHRNA4-202ENST00000463705 SART3Q15020 963 aaKnown RBP16.18■□□□□ 0.18
CHRNA4-202ENST00000463705 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
CHRNA4-202ENST00000463705 BACH2Q9BYV9 841 aa16.17■□□□□ 0.18
CHRNA4-202ENST00000463705 FBXW7Q969H0 707 aa16.17■□□□□ 0.18
CHRNA4-202ENST00000463705 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
CHRNA4-202ENST00000463705 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 LETM1O95202 739 aaPredicted RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 NSD2O96028 1365 aa16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 RRS1Q15050 365 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 CCDC70Q6NSX1 233 aa16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 IPO7O95373 1038 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 PDCP20941 246 aa16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-202ENST00000463705 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
CHRNA4-202ENST00000463705 CCDC158Q5M9N0 1113 aa16.15■□□□□ 0.18
CHRNA4-202ENST00000463705 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
CHRNA4-202ENST00000463705 FANCAO15360 1455 aa16.15■□□□□ 0.18
CHRNA4-202ENST00000463705 RAD21O60216 631 aa16.15■□□□□ 0.18
CHRNA4-202ENST00000463705 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 RAPGEF6Q8TEU7 1601 aa16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 TOM1L2Q6ZVM7 507 aa16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 SLC3A2P08195 630 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 GNL3LQ9NVN8 582 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-202ENST00000463705 MBD3O95983 291 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 TTC39AQ5SRH9 613 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 NAT10Q9H0A0 1025 aaKnown RBP16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 STRN4Q9NRL3 753 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 ARID3AQ99856 593 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
CHRNA4-202ENST00000463705 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-202ENST00000463705 ANKRD1Q15327 319 aa16.12■□□□□ 0.17
CHRNA4-202ENST00000463705 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms