RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 CRYBG1Q9Y4K1 1723 aa31.89■■■□□ 2.69
PDLIM7-206ENST00000463411 NEUROD1Q13562 356 aa31.87■■■□□ 2.69
PDLIM7-206ENST00000463411 COL14A1Q05707 1796 aaKnown RBP31.86■■■□□ 2.69
PDLIM7-206ENST00000463411 CCDC61Q9Y6R9 512 aa31.86■■■□□ 2.69
PDLIM7-206ENST00000463411 VPS72Q15906 364 aa31.84■■■□□ 2.69
PDLIM7-206ENST00000463411 NRAPQ86VF7 1730 aa31.83■■■□□ 2.69
PDLIM7-206ENST00000463411 POLR3AO14802 1390 aaPredicted RBP31.83■■■□□ 2.69
PDLIM7-206ENST00000463411 SRPK2P78362 688 aaKnown RBP31.83■■■□□ 2.69
PDLIM7-206ENST00000463411 CCDC9Q9Y3X0 531 aaKnown RBP31.83■■■□□ 2.69
PDLIM7-206ENST00000463411 FAM83GA6ND36 823 aa31.81■■■□□ 2.68
PDLIM7-206ENST00000463411 PHRF1Q9P1Y6 1649 aaKnown RBP31.81■■■□□ 2.68
PDLIM7-206ENST00000463411 ACEP12821 1306 aa31.8■■■□□ 2.68
PDLIM7-206ENST00000463411 ROCK2O75116 1388 aaKnown RBP31.79■■■□□ 2.68
PDLIM7-206ENST00000463411 PPIP5K1Q6PFW1 1433 aa31.78■■■□□ 2.68
PDLIM7-206ENST00000463411 PLEKHG3A1L390 1219 aa31.78■■■□□ 2.68
PDLIM7-206ENST00000463411 NBPF8Q3BBV2 869 aa31.76■■■□□ 2.67
PDLIM7-206ENST00000463411 BTG4Q9NY30 223 aa31.76■■■□□ 2.67
PDLIM7-206ENST00000463411 BRWD3Q6RI45 1802 aa31.76■■■□□ 2.67
PDLIM7-206ENST00000463411 CABP2Q9NPB3 220 aa31.74■■■□□ 2.67
PDLIM7-206ENST00000463411 PRDM11Q9NQV5 511 aa31.73■■■□□ 2.67
PDLIM7-206ENST00000463411 SEPT12Q8IYM1 358 aa31.71■■■□□ 2.67
PDLIM7-206ENST00000463411 CCDC125Q86Z20 511 aa31.7■■■□□ 2.67
PDLIM7-206ENST00000463411 EVC2Q86UK5 1308 aa31.7■■■□□ 2.66
PDLIM7-206ENST00000463411 NUTM2GQ5VZR2 741 aa31.69■■■□□ 2.66
PDLIM7-206ENST00000463411 NRKQ7Z2Y5 1582 aa31.68■■■□□ 2.66
PDLIM7-206ENST00000463411 BRD4O60885 1362 aaPredicted RBP31.68■■■□□ 2.66
PDLIM7-206ENST00000463411 KIAA0232Q92628 1395 aa31.68■■■□□ 2.66
PDLIM7-206ENST00000463411 A0A0G2JS52 829 aa31.67■■■□□ 2.66
PDLIM7-206ENST00000463411 MYT1Q01538 1121 aa31.67■■■□□ 2.66
PDLIM7-206ENST00000463411 ABTB2Q8N961 1025 aa31.67■■■□□ 2.66
PDLIM7-206ENST00000463411 TONSLQ96HA7 1378 aa31.66■■■□□ 2.66
PDLIM7-206ENST00000463411 ONECUT3O60422 494 aaPredicted RBP31.65■■■□□ 2.66
PDLIM7-206ENST00000463411 EP400Q96L91 3159 aa31.65■■■□□ 2.66
PDLIM7-206ENST00000463411 BLMP54132 1417 aaPredicted RBP31.62■■■□□ 2.65
PDLIM7-206ENST00000463411 ZC3H6P61129 1189 aaKnown RBP31.62■■■□□ 2.65
PDLIM7-206ENST00000463411 FAM98CQ17RN3 349 aaKnown RBP31.62■■■□□ 2.65
PDLIM7-206ENST00000463411 USP6P35125 1406 aa31.61■■■□□ 2.65
PDLIM7-206ENST00000463411 KRT27Q7Z3Y8 459 aa31.61■■■□□ 2.65
PDLIM7-206ENST00000463411 CABP1Q9NZU7 370 aa31.61■■■□□ 2.65
PDLIM7-206ENST00000463411 USP19O94966 1318 aa31.6■■■□□ 2.65
PDLIM7-206ENST00000463411 SPATA31A5Q5VU36 1347 aa31.6■■■□□ 2.65
PDLIM7-206ENST00000463411 SPATA31A7Q8IWB4 1347 aa31.6■■■□□ 2.65
PDLIM7-206ENST00000463411 CHRNA2Q15822 529 aa31.6■■■□□ 2.65
PDLIM7-206ENST00000463411 NLRP13Q86W25 1043 aa31.6■■■□□ 2.65
PDLIM7-206ENST00000463411 SF3B2Q13435 895 aaKnown RBP31.56■■■□□ 2.64
PDLIM7-206ENST00000463411 CARD11Q9BXL7 1154 aa31.56■■■□□ 2.64
PDLIM7-206ENST00000463411 THSD7AQ9UPZ6 1657 aa31.56■■■□□ 2.64
PDLIM7-206ENST00000463411 CPDO75976 1380 aa31.56■■■□□ 2.64
PDLIM7-206ENST00000463411 STRN4Q9NRL3 753 aa31.55■■■□□ 2.64
PDLIM7-206ENST00000463411 AKAP12Q02952 1782 aa31.55■■■□□ 2.64
PDLIM7-206ENST00000463411 LMO7Q8WWI1 1683 aa31.53■■■□□ 2.64
PDLIM7-206ENST00000463411 SBNO2Q9Y2G9 1366 aa31.53■■■□□ 2.64
PDLIM7-206ENST00000463411 PIK3C2AO00443 1686 aa31.52■■■□□ 2.64
PDLIM7-206ENST00000463411 SPATA31A1Q5TZJ5 1347 aa31.51■■■□□ 2.64
PDLIM7-206ENST00000463411 EVA1CP58658 441 aa31.51■■■□□ 2.63
PDLIM7-206ENST00000463411 SSH2Q76I76 1423 aa31.5■■■□□ 2.63
PDLIM7-206ENST00000463411 GCP02774 474 aa31.5■■■□□ 2.63
PDLIM7-206ENST00000463411 SLIT3O75094 1523 aa31.49■■■□□ 2.63
PDLIM7-206ENST00000463411 NLRP6P59044 892 aa31.49■■■□□ 2.63
PDLIM7-206ENST00000463411 ZNF692Q9BU19 519 aaPredicted RBP31.49■■■□□ 2.63
PDLIM7-206ENST00000463411 PCGF6Q9BYE7 350 aa31.49■■■□□ 2.63
PDLIM7-206ENST00000463411 CAMTA1Q9Y6Y1 1673 aa31.48■■■□□ 2.63
PDLIM7-206ENST00000463411 ZRANB1Q9UGI0 708 aa31.48■■■□□ 2.63
PDLIM7-206ENST00000463411 RGPD1P0DJD0 1748 aa31.45■■■□□ 2.63
PDLIM7-206ENST00000463411 MON2Q7Z3U7 1717 aa31.44■■■□□ 2.62
PDLIM7-206ENST00000463411 USP35Q9P2H5 1018 aa31.43■■■□□ 2.62
PDLIM7-206ENST00000463411 ZBTB7CA1YPR0 619 aa31.42■■■□□ 2.62
PDLIM7-206ENST00000463411 TTC21BQ7Z4L5 1316 aa31.42■■■□□ 2.62
PDLIM7-206ENST00000463411 TTC21AQ8NDW8 1320 aa31.42■■■□□ 2.62
PDLIM7-206ENST00000463411 KTN1Q86UP2 1357 aaKnown RBP31.42■■■□□ 2.62
PDLIM7-206ENST00000463411 CPSF1Q10570 1443 aaKnown RBP31.41■■■□□ 2.62
PDLIM7-206ENST00000463411 COL5A2P05997 1499 aaPredicted RBP31.41■■■□□ 2.62
PDLIM7-206ENST00000463411 DEFB132Q7Z7B7 95 aa31.4■■■□□ 2.62
PDLIM7-206ENST00000463411 LARP1Q6PKG0 1096 aaKnown RBP31.39■■■□□ 2.62
PDLIM7-206ENST00000463411 BARGINQ6ZT62 677 aa31.39■■■□□ 2.62
PDLIM7-206ENST00000463411 BAG6P46379 1132 aa31.37■■■□□ 2.61
PDLIM7-206ENST00000463411 TCP11L2Q8N4U5 519 aa31.37■■■□□ 2.61
PDLIM7-206ENST00000463411 AATKQ6ZMQ8 1374 aa31.37■■■□□ 2.61
PDLIM7-206ENST00000463411 KCNH5Q8NCM2 988 aa31.36■■■□□ 2.61
PDLIM7-206ENST00000463411 FAM182BQ5T319 152 aa31.35■■■□□ 2.61
PDLIM7-206ENST00000463411 THRAP3Q9Y2W1 955 aaKnown RBP31.35■■■□□ 2.61
PDLIM7-206ENST00000463411 CRB1P82279 1406 aa31.34■■■□□ 2.61
PDLIM7-206ENST00000463411 TNS1Q9HBL0 1735 aaKnown RBP31.33■■■□□ 2.61
PDLIM7-206ENST00000463411 TMC1Q8TDI8 760 aa31.33■■■□□ 2.61
PDLIM7-206ENST00000463411 COL18A1P39060 1754 aa31.33■■■□□ 2.61
PDLIM7-206ENST00000463411 PARP4Q9UKK3 1724 aaKnown RBP31.32■■■□□ 2.6
PDLIM7-206ENST00000463411 PDE3BQ13370 1112 aa31.31■■■□□ 2.6
PDLIM7-206ENST00000463411 HDGFL2Q7Z4V5 671 aaPredicted RBP31.31■■■□□ 2.6
PDLIM7-206ENST00000463411 FAM196AQ6ZSG2 479 aa31.3■■■□□ 2.6
PDLIM7-206ENST00000463411 USP54Q70EL1 1684 aa31.29■■■□□ 2.6
PDLIM7-206ENST00000463411 CD163L1Q9NR16 1453 aa31.28■■■□□ 2.6
PDLIM7-206ENST00000463411 SOX12O15370 315 aa31.28■■■□□ 2.6
PDLIM7-206ENST00000463411 NFAT5O94916 1531 aa31.28■■■□□ 2.6
PDLIM7-206ENST00000463411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.27■■■□□ 2.6
PDLIM7-206ENST00000463411 PUS7Q96PZ0 661 aaKnown RBP31.27■■■□□ 2.6
PDLIM7-206ENST00000463411 SLC24A1O60721 1099 aa31.26■■■□□ 2.59
PDLIM7-206ENST00000463411 RGPD5Q99666 1765 aa31.25■■■□□ 2.59
PDLIM7-206ENST00000463411 DISP2A7MBM2 1401 aa31.25■■■□□ 2.59
PDLIM7-206ENST00000463411 ABCC6O95255 1503 aa31.25■■■□□ 2.59
PDLIM7-206ENST00000463411 TOM1L2Q6ZVM7 507 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms