RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 P3H3Q8IVL6 736 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 ZNF511Q8NB15 262 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 NANOS1Q8WY41 292 aaKnown RBP4.37□□□□□ -1.71
TMEM56-204ENST00000463375 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 UNC93B1Q9H1C4 597 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 DNMT3LQ9UJW3 386 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 SOS2Q07890 1332 aaPredicted RBP4.37□□□□□ -1.71
TMEM56-204ENST00000463375 TESPA1A2RU30 521 aaPredicted RBP4.36□□□□□ -1.71
TMEM56-204ENST00000463375 MS4A1P11836 297 aa4.36□□□□□ -1.71
TMEM56-204ENST00000463375 RNFT1Q5M7Z0 435 aa4.36□□□□□ -1.71
TMEM56-204ENST00000463375 LINC00528Q8N1L1 170 aa4.36□□□□□ -1.71
TMEM56-204ENST00000463375 MEIOBQ8N635 442 aa4.36□□□□□ -1.71
TMEM56-204ENST00000463375 CDK15Q96Q40 435 aa4.36□□□□□ -1.71
TMEM56-204ENST00000463375 COL25A1Q9BXS0 654 aaPredicted RBP4.36□□□□□ -1.71
TMEM56-204ENST00000463375 ZIC2O95409 532 aaPredicted RBP4.35□□□□□ -1.71
TMEM56-204ENST00000463375 GUCA2AQ02747 115 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 LINC01559Q495D7 138 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 C6orf118Q5T5N4 469 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 WHAMMQ8TF30 809 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 BAP1Q92560 729 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 SYMPKQ92797 1274 aaKnown RBP4.35□□□□□ -1.71
TMEM56-204ENST00000463375 ITPKCQ96DU7 683 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 SCARF2Q96GP6 870 aaPredicted RBP4.35□□□□□ -1.71
TMEM56-204ENST00000463375 ZFAND3Q9H8U3 227 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 EVA1BQ9NVM1 165 aa4.35□□□□□ -1.71
TMEM56-204ENST00000463375 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
TMEM56-204ENST00000463375 FAM174AQ8TBP5 190 aa4.34□□□□□ -1.71
TMEM56-204ENST00000463375 PSMG3-AS1Q96PY0 264 aa4.34□□□□□ -1.71
TMEM56-204ENST00000463375 MSTNO14793 375 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 UPP2O95045 317 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 NR3C2P08235 984 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 BMP2P12643 396 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 MARSP56192 900 aaKnown RBP4.33□□□□□ -1.72
TMEM56-204ENST00000463375 KCNH2Q12809 1159 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 NR5A1Q13285 461 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.33□□□□□ -1.72
TMEM56-204ENST00000463375 SMYD5Q6GMV2 418 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 SPOCK3Q9BQ16 436 aa4.33□□□□□ -1.72
TMEM56-204ENST00000463375 PROCP04070 461 aa4.32□□□□□ -1.72
TMEM56-204ENST00000463375 ITGB2P05107 769 aa4.32□□□□□ -1.72
TMEM56-204ENST00000463375 PTSQ03393 145 aa4.32□□□□□ -1.72
TMEM56-204ENST00000463375 PLA2G4EQ3MJ16 856 aa4.32□□□□□ -1.72
TMEM56-204ENST00000463375 DESI1Q6ICB0 168 aa4.31□□□□□ -1.72
TMEM56-204ENST00000463375 PCDHGC3Q9UN70 934 aa4.31□□□□□ -1.72
TMEM56-204ENST00000463375 SPTLC1O15269 473 aa4.3□□□□□ -1.72
TMEM56-204ENST00000463375 CCDC155Q8N6L0 562 aa4.3□□□□□ -1.72
TMEM56-204ENST00000463375 DCAF5Q96JK2 942 aa4.3□□□□□ -1.72
TMEM56-204ENST00000463375 TSEN34Q9BSV6 310 aaKnown RBP4.3□□□□□ -1.72
TMEM56-204ENST00000463375 SLC35F4A4IF30 521 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 TTLL8A6PVC2 850 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 C6orf229H3BNL8 230 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 FDX1P10109 184 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 GRM5P41594 1212 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 MDM2Q00987 491 aaPredicted RBP4.29□□□□□ -1.72
TMEM56-204ENST00000463375 MAP2K5Q13163 448 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 KRTAP1-3Q8IUG1 177 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 Q8N3U1 123 aa4.29□□□□□ -1.72
TMEM56-204ENST00000463375 K7ELQ4 463 aaPredicted RBP4.28□□□□□ -1.72
TMEM56-204ENST00000463375 ADAMTS2O95450 1211 aa4.28□□□□□ -1.72
TMEM56-204ENST00000463375 ITGA6P23229 1130 aa4.28□□□□□ -1.72
TMEM56-204ENST00000463375 GPIHBP1Q8IV16 184 aa4.28□□□□□ -1.72
TMEM56-204ENST00000463375 TSHZ2Q9NRE2 1034 aa4.28□□□□□ -1.72
TMEM56-204ENST00000463375 FAM217BQ9NTX9 383 aaPredicted RBP4.28□□□□□ -1.72
TMEM56-204ENST00000463375 PHF20L1A8MW92 1017 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 MAP3K10Q02779 954 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 SRSF11Q05519 484 aaKnown RBP4.27□□□□□ -1.73
TMEM56-204ENST00000463375 ARID5BQ14865 1188 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 LYPD4Q6UWN0 246 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 SV2AQ7L0J3 742 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 NUTM1Q86Y26 1132 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 FOXJ1Q92949 421 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 MAP4K5Q9Y4K4 846 aa4.27□□□□□ -1.73
TMEM56-204ENST00000463375 SPDYE5A6NIY4 337 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 SPINT1O43278 529 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 CELA2BP08218 269 aaPredicted RBP4.26□□□□□ -1.73
TMEM56-204ENST00000463375 C4orf48Q5BLP8 95 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 PRR7Q8TB68 274 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 C1QTNF2Q9BXJ5 285 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 GPCPD1Q9NPB8 672 aa4.26□□□□□ -1.73
TMEM56-204ENST00000463375 IRF6O14896 467 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 F12P00748 615 aaPredicted RBP4.25□□□□□ -1.73
TMEM56-204ENST00000463375 FSHRP23945 695 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 CLCN1P35523 988 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 VWA5B2Q8N398 1253 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 GALNT6Q8NCL4 622 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 ENAMQ9NRM1 1142 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 EMILIN1Q9Y6C2 1016 aa4.25□□□□□ -1.73
TMEM56-204ENST00000463375 CDC14CA4D256 554 aa4.24□□□□□ -1.73
TMEM56-204ENST00000463375 MTMR2Q13614 643 aa4.24□□□□□ -1.73
TMEM56-204ENST00000463375 GAS6Q14393 721 aa4.24□□□□□ -1.73
TMEM56-204ENST00000463375 LYPD8Q6UX82 237 aa4.24□□□□□ -1.73
TMEM56-204ENST00000463375 Q6ZVU0 165 aa4.24□□□□□ -1.73
TMEM56-204ENST00000463375 BPHLQ86WA6 291 aaPredicted RBP4.24□□□□□ -1.73
TMEM56-204ENST00000463375 TRMT44Q8IYL2 757 aaKnown RBP4.24□□□□□ -1.73
TMEM56-204ENST00000463375 FIGNL2A6NMB9 653 aa4.23□□□□□ -1.73
TMEM56-204ENST00000463375 CNTNAP5Q8WYK1 1306 aa4.22□□□□□ -1.73
TMEM56-204ENST00000463375 SENP3-EIF4A1A0A087X0R7 540 aa4.22□□□□□ -1.73
TMEM56-204ENST00000463375 CTHP32929 405 aa4.22□□□□□ -1.73
TMEM56-204ENST00000463375 BAG6P46379 1132 aa4.22□□□□□ -1.73
TMEM56-204ENST00000463375 LCE3BQ5TA77 95 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms