RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
NDUFA4-202ENST00000463308 PROCP04070 461 aa7.62□□□□□ -1.19
NDUFA4-202ENST00000463308 BMP2P12643 396 aa7.62□□□□□ -1.19
NDUFA4-202ENST00000463308 USP46P62068 366 aa7.62□□□□□ -1.19
NDUFA4-202ENST00000463308 RNFT1Q5M7Z0 435 aa7.62□□□□□ -1.19
NDUFA4-202ENST00000463308 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
NDUFA4-202ENST00000463308 KDM4AO75164 1064 aa7.61□□□□□ -1.19
NDUFA4-202ENST00000463308 MAP3K10Q02779 954 aa7.61□□□□□ -1.19
NDUFA4-202ENST00000463308 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.61□□□□□ -1.19
NDUFA4-202ENST00000463308 DCAF5Q96JK2 942 aa7.61□□□□□ -1.19
NDUFA4-202ENST00000463308 DNMT3LQ9UJW3 386 aa7.6□□□□□ -1.19
NDUFA4-202ENST00000463308 ZIC2O95409 532 aaPredicted RBP7.59□□□□□ -1.19
NDUFA4-202ENST00000463308 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
NDUFA4-202ENST00000463308 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
NDUFA4-202ENST00000463308 GNPATO15228 680 aa7.58□□□□□ -1.2
NDUFA4-202ENST00000463308 CCNYL3P0C7X3 344 aa7.58□□□□□ -1.2
NDUFA4-202ENST00000463308 NLRP7Q8WX94 980 aa7.58□□□□□ -1.2
NDUFA4-202ENST00000463308 ITGB2P05107 769 aa7.57□□□□□ -1.2
NDUFA4-202ENST00000463308 CD46P15529 392 aa7.57□□□□□ -1.2
NDUFA4-202ENST00000463308 PTSQ03393 145 aa7.57□□□□□ -1.2
NDUFA4-202ENST00000463308 BTBD11A6QL63 1104 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 ZNF511Q8NB15 262 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 ITPKCQ96DU7 683 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 UNC93B1Q9H1C4 597 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 ZFAND3Q9H8U3 227 aa7.56□□□□□ -1.2
NDUFA4-202ENST00000463308 MEIOBQ8N635 442 aa7.55□□□□□ -1.2
NDUFA4-202ENST00000463308 FAM174AQ8TBP5 190 aa7.55□□□□□ -1.2
NDUFA4-202ENST00000463308 SPTLC1O15269 473 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 NR5A1Q13285 461 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 CCDC155Q8N6L0 562 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 BEND7Q8N7W2 519 aaPredicted RBP7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 BAP1Q92560 729 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
NDUFA4-202ENST00000463308 HOXA2O43364 376 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 ADAMTS2O95450 1211 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 MS4A1P11836 297 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 LYPD4Q6UWN0 246 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
NDUFA4-202ENST00000463308 SRSF11Q05519 484 aaKnown RBP7.52□□□□□ -1.21
NDUFA4-202ENST00000463308 PTPRNQ16849 979 aa7.52□□□□□ -1.21
NDUFA4-202ENST00000463308 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
NDUFA4-202ENST00000463308 TSEN34Q9BSV6 310 aaKnown RBP7.52□□□□□ -1.21
NDUFA4-202ENST00000463308 EVA1BQ9NVM1 165 aa7.52□□□□□ -1.21
NDUFA4-202ENST00000463308 TTLL8A6PVC2 850 aa7.51□□□□□ -1.21
NDUFA4-202ENST00000463308 BAG6P46379 1132 aa7.51□□□□□ -1.21
NDUFA4-202ENST00000463308 HLA-CQ95604 372 aa7.51□□□□□ -1.21
NDUFA4-202ENST00000463308 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
NDUFA4-202ENST00000463308 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.5□□□□□ -1.21
NDUFA4-202ENST00000463308 ITGA6P23229 1130 aa7.49□□□□□ -1.21
NDUFA4-202ENST00000463308 KCNH2Q12809 1159 aa7.49□□□□□ -1.21
NDUFA4-202ENST00000463308 VWA5B2Q8N398 1253 aa7.49□□□□□ -1.21
NDUFA4-202ENST00000463308 CDC14CA4D256 554 aa7.48□□□□□ -1.21
NDUFA4-202ENST00000463308 SLC35F4A4IF30 521 aa7.48□□□□□ -1.21
NDUFA4-202ENST00000463308 CNTNAP5Q8WYK1 1306 aa7.48□□□□□ -1.21
NDUFA4-202ENST00000463308 NR3C2P08235 984 aa7.47□□□□□ -1.21
NDUFA4-202ENST00000463308 KCNV2Q8TDN2 545 aa7.47□□□□□ -1.21
NDUFA4-202ENST00000463308 SYMPKQ92797 1274 aaKnown RBP7.47□□□□□ -1.21
NDUFA4-202ENST00000463308 ARID5BQ14865 1188 aa7.46□□□□□ -1.22
NDUFA4-202ENST00000463308 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
NDUFA4-202ENST00000463308 KRTAP9-4Q9BYQ2 154 aa7.46□□□□□ -1.22
NDUFA4-202ENST00000463308 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
NDUFA4-202ENST00000463308 GUCA2AQ02747 115 aa7.44□□□□□ -1.22
NDUFA4-202ENST00000463308 ALYREFQ86V81 257 aaKnown RBP7.44□□□□□ -1.22
NDUFA4-202ENST00000463308 FURINP09958 794 aa7.43□□□□□ -1.22
NDUFA4-202ENST00000463308 GPR37O15354 613 aa7.42□□□□□ -1.22
NDUFA4-202ENST00000463308 GRM5P41594 1212 aa7.42□□□□□ -1.22
NDUFA4-202ENST00000463308 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
NDUFA4-202ENST00000463308 SH3RF1Q7Z6J0 888 aa7.41□□□□□ -1.22
NDUFA4-202ENST00000463308 NEDD1Q8NHV4 660 aa7.41□□□□□ -1.22
NDUFA4-202ENST00000463308 C6orf229H3BNL8 230 aa7.4□□□□□ -1.22
NDUFA4-202ENST00000463308 AMER1Q5JTC6 1135 aaPredicted RBP7.4□□□□□ -1.22
NDUFA4-202ENST00000463308 EMILIN1Q9Y6C2 1016 aa7.4□□□□□ -1.22
NDUFA4-202ENST00000463308 SEMA3EO15041 775 aa7.39□□□□□ -1.23
NDUFA4-202ENST00000463308 RBM26Q5T8P6 1007 aaKnown RBP7.39□□□□□ -1.23
NDUFA4-202ENST00000463308 DESI1Q6ICB0 168 aa7.39□□□□□ -1.23
NDUFA4-202ENST00000463308 LRRC4BQ9NT99 713 aa7.39□□□□□ -1.23
NDUFA4-202ENST00000463308 SPINT1O43278 529 aa7.38□□□□□ -1.23
NDUFA4-202ENST00000463308 BCRP11274 1271 aa7.38□□□□□ -1.23
NDUFA4-202ENST00000463308 SMYD5Q6GMV2 418 aa7.38□□□□□ -1.23
NDUFA4-202ENST00000463308 MBIPQ9NS73 344 aa7.37□□□□□ -1.23
NDUFA4-202ENST00000463308 KRBA1A5PL33 1030 aa7.36□□□□□ -1.23
NDUFA4-202ENST00000463308 FDX1P10109 184 aa7.36□□□□□ -1.23
NDUFA4-202ENST00000463308 GAS6Q14393 721 aa7.36□□□□□ -1.23
NDUFA4-202ENST00000463308 FOXJ1Q92949 421 aa7.36□□□□□ -1.23
NDUFA4-202ENST00000463308 CFAP44Q96MT7 982 aa7.36□□□□□ -1.23
NDUFA4-202ENST00000463308 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
NDUFA4-202ENST00000463308 BPHLQ86WA6 291 aaPredicted RBP7.35□□□□□ -1.23
NDUFA4-202ENST00000463308 NUTM1Q86Y26 1132 aa7.35□□□□□ -1.23
NDUFA4-202ENST00000463308 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
NDUFA4-202ENST00000463308 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
NDUFA4-202ENST00000463308 FSHRP23945 695 aa7.34□□□□□ -1.23
NDUFA4-202ENST00000463308 AGERQ15109 404 aa7.34□□□□□ -1.23
NDUFA4-202ENST00000463308 CCDC116Q8IYX3 515 aa7.33□□□□□ -1.24
NDUFA4-202ENST00000463308 PCDHGC3Q9UN70 934 aa7.33□□□□□ -1.24
NDUFA4-202ENST00000463308 SPDYE5A6NIY4 337 aa7.32□□□□□ -1.24
NDUFA4-202ENST00000463308 CTHP32929 405 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms