RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 A0A0G2JS52 829 aa28.91■■■□□ 2.22
VARS-221ENST00000463184 MYT1Q01538 1121 aa28.91■■■□□ 2.22
VARS-221ENST00000463184 PAK3O75914 559 aaPredicted RBP28.9■■■□□ 2.22
VARS-221ENST00000463184 FAM98CQ17RN3 349 aaKnown RBP28.9■■■□□ 2.22
VARS-221ENST00000463184 COL14A1Q05707 1796 aaKnown RBP28.89■■■□□ 2.22
VARS-221ENST00000463184 NRAPQ86VF7 1730 aa28.89■■■□□ 2.21
VARS-221ENST00000463184 NUDT16Q96DE0 195 aaKnown RBP28.87■■■□□ 2.21
VARS-221ENST00000463184 PRDM11Q9NQV5 511 aa28.84■■■□□ 2.21
VARS-221ENST00000463184 SPATA31A5Q5VU36 1347 aa28.84■■■□□ 2.21
VARS-221ENST00000463184 SPATA31A7Q8IWB4 1347 aa28.84■■■□□ 2.21
VARS-221ENST00000463184 BAG6P46379 1132 aa28.83■■■□□ 2.21
VARS-221ENST00000463184 ATP7BP35670 1465 aa28.83■■■□□ 2.21
VARS-221ENST00000463184 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
VARS-221ENST00000463184 CDK19Q9BWU1 502 aa28.82■■■□□ 2.2
VARS-221ENST00000463184 ITSN1Q15811 1721 aa28.8■■■□□ 2.2
VARS-221ENST00000463184 CRYBG1Q9Y4K1 1723 aa28.8■■■□□ 2.2
VARS-221ENST00000463184 CCDC61Q9Y6R9 512 aa28.77■■■□□ 2.2
VARS-221ENST00000463184 POLR3AO14802 1390 aaPredicted RBP28.75■■■□□ 2.19
VARS-221ENST00000463184 KIAA0232Q92628 1395 aa28.75■■■□□ 2.19
VARS-221ENST00000463184 ACEP12821 1306 aa28.74■■■□□ 2.19
VARS-221ENST00000463184 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
VARS-221ENST00000463184 SPATA31A1Q5TZJ5 1347 aa28.73■■■□□ 2.19
VARS-221ENST00000463184 PLEKHG3A1L390 1219 aa28.73■■■□□ 2.19
VARS-221ENST00000463184 CHRNA2Q15822 529 aa28.72■■■□□ 2.19
VARS-221ENST00000463184 FAM182BQ5T319 152 aa28.72■■■□□ 2.19
VARS-221ENST00000463184 THSD7AQ9UPZ6 1657 aa28.71■■■□□ 2.19
VARS-221ENST00000463184 ZC3H6P61129 1189 aaKnown RBP28.71■■■□□ 2.19
VARS-221ENST00000463184 NUTM2GQ5VZR2 741 aa28.71■■■□□ 2.19
VARS-221ENST00000463184 KIAA1210Q9ULL0 1709 aa28.71■■■□□ 2.19
VARS-221ENST00000463184 EN1Q05925 392 aaPredicted RBP28.7■■■□□ 2.18
VARS-221ENST00000463184 STRN4Q9NRL3 753 aa28.7■■■□□ 2.18
VARS-221ENST00000463184 NBPF1Q3BBV0 1214 aa28.68■■■□□ 2.18
VARS-221ENST00000463184 RGPD1P0DJD0 1748 aa28.68■■■□□ 2.18
VARS-221ENST00000463184 PHRF1Q9P1Y6 1649 aaKnown RBP28.68■■■□□ 2.18
VARS-221ENST00000463184 ABTB2Q8N961 1025 aa28.67■■■□□ 2.18
VARS-221ENST00000463184 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
VARS-221ENST00000463184 PSDA5PKW4 1024 aaPredicted RBP28.66■■■□□ 2.18
VARS-221ENST00000463184 EVA1CP58658 441 aa28.66■■■□□ 2.18
VARS-221ENST00000463184 FAM196AQ6ZSG2 479 aa28.66■■■□□ 2.18
VARS-221ENST00000463184 DISP2A7MBM2 1401 aa28.65■■■□□ 2.18
VARS-221ENST00000463184 LRP5O75197 1615 aa28.65■■■□□ 2.18
VARS-221ENST00000463184 BARGINQ6ZT62 677 aa28.63■■■□□ 2.17
VARS-221ENST00000463184 SRPK2P78362 688 aaKnown RBP28.62■■■□□ 2.17
VARS-221ENST00000463184 USP35Q9P2H5 1018 aa28.62■■■□□ 2.17
VARS-221ENST00000463184 CPDO75976 1380 aa28.62■■■□□ 2.17
VARS-221ENST00000463184 NLRP13Q86W25 1043 aa28.61■■■□□ 2.17
VARS-221ENST00000463184 USP19O94966 1318 aa28.61■■■□□ 2.17
VARS-221ENST00000463184 CENPJQ9HC77 1338 aaPredicted RBP28.61■■■□□ 2.17
VARS-221ENST00000463184 SSH2Q76I76 1423 aa28.6■■■□□ 2.17
VARS-221ENST00000463184 TRIM37O94972 964 aa28.59■■■□□ 2.17
VARS-221ENST00000463184 PPIP5K1Q6PFW1 1433 aa28.59■■■□□ 2.17
VARS-221ENST00000463184 PDE3BQ13370 1112 aa28.58■■■□□ 2.17
VARS-221ENST00000463184 EZH2Q15910 746 aaKnown RBP28.58■■■□□ 2.17
VARS-221ENST00000463184 NRKQ7Z2Y5 1582 aa28.58■■■□□ 2.17
VARS-221ENST00000463184 GCP02774 474 aa28.57■■■□□ 2.16
VARS-221ENST00000463184 LARP1Q6PKG0 1096 aaKnown RBP28.57■■■□□ 2.16
VARS-221ENST00000463184 TCP11L2Q8N4U5 519 aa28.57■■■□□ 2.16
VARS-221ENST00000463184 CAMKK2Q96RR4 588 aa28.57■■■□□ 2.16
VARS-221ENST00000463184 CABP2Q9NPB3 220 aa28.57■■■□□ 2.16
VARS-221ENST00000463184 BRD4O60885 1362 aaPredicted RBP28.57■■■□□ 2.16
VARS-221ENST00000463184 CAMTA1Q9Y6Y1 1673 aa28.57■■■□□ 2.16
VARS-221ENST00000463184 TNS1Q9HBL0 1735 aaKnown RBP28.56■■■□□ 2.16
VARS-221ENST00000463184 R3HDM1Q15032 1099 aaKnown RBP28.55■■■□□ 2.16
VARS-221ENST00000463184 THRAP3Q9Y2W1 955 aaKnown RBP28.55■■■□□ 2.16
VARS-221ENST00000463184 APBA3O96018 575 aa28.54■■■□□ 2.16
VARS-221ENST00000463184 PARD3Q8TEW0 1356 aa28.52■■■□□ 2.16
VARS-221ENST00000463184 LMO7Q8WWI1 1683 aa28.52■■■□□ 2.16
VARS-221ENST00000463184 CABP1Q9NZU7 370 aa28.51■■■□□ 2.15
VARS-221ENST00000463184 USP6P35125 1406 aa28.47■■■□□ 2.15
VARS-221ENST00000463184 NLRP6P59044 892 aa28.47■■■□□ 2.15
VARS-221ENST00000463184 L3MBTL2Q969R5 705 aa28.47■■■□□ 2.15
VARS-221ENST00000463184 COL5A2P05997 1499 aaPredicted RBP28.46■■■□□ 2.15
VARS-221ENST00000463184 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
VARS-221ENST00000463184 C11orf95C9JLR9 678 aaPredicted RBP28.46■■■□□ 2.15
VARS-221ENST00000463184 EVC2Q86UK5 1308 aa28.44■■■□□ 2.14
VARS-221ENST00000463184 AATKQ6ZMQ8 1374 aa28.43■■■□□ 2.14
VARS-221ENST00000463184 CRB1P82279 1406 aa28.43■■■□□ 2.14
VARS-221ENST00000463184 ZBTB7CA1YPR0 619 aa28.42■■■□□ 2.14
VARS-221ENST00000463184 NBPF14Q5TI25 921 aa28.41■■■□□ 2.14
VARS-221ENST00000463184 SLIT3O75094 1523 aa28.39■■■□□ 2.14
VARS-221ENST00000463184 ZNF692Q9BU19 519 aaPredicted RBP28.39■■■□□ 2.14
VARS-221ENST00000463184 PARP4Q9UKK3 1724 aaKnown RBP28.39■■■□□ 2.14
VARS-221ENST00000463184 RREB1Q92766 1687 aa28.36■■■□□ 2.13
VARS-221ENST00000463184 TOM1L2Q6ZVM7 507 aa28.36■■■□□ 2.13
VARS-221ENST00000463184 SIN3AQ96ST3 1273 aa28.36■■■□□ 2.13
VARS-221ENST00000463184 DDB1Q16531 1140 aa28.34■■■□□ 2.13
VARS-221ENST00000463184 ROCK2O75116 1388 aaKnown RBP28.34■■■□□ 2.13
VARS-221ENST00000463184 OVOS2A0A0G2JMS6 1433 aa28.34■■■□□ 2.13
VARS-221ENST00000463184 OVOS2A0A0J9YW53 1432 aa28.34■■■□□ 2.13
VARS-221ENST00000463184 OVOS2Q6IE36 1432 aa28.34■■■□□ 2.13
VARS-221ENST00000463184 TRPM1Q7Z4N2 1603 aa28.33■■■□□ 2.13
VARS-221ENST00000463184 KCNH5Q8NCM2 988 aa28.33■■■□□ 2.13
VARS-221ENST00000463184 TTC21BQ7Z4L5 1316 aa28.33■■■□□ 2.13
VARS-221ENST00000463184 AXIN2Q9Y2T1 843 aa28.32■■■□□ 2.12
VARS-221ENST00000463184 PIK3C2AO00443 1686 aa28.32■■■□□ 2.12
VARS-221ENST00000463184 NUP188Q5SRE5 1749 aa28.32■■■□□ 2.12
VARS-221ENST00000463184 ARHGEF25Q86VW2 580 aa28.31■■■□□ 2.12
VARS-221ENST00000463184 CDCA7Q9BWT1 371 aaPredicted RBP28.31■■■□□ 2.12
VARS-221ENST00000463184 WDR17Q8IZU2 1322 aa28.31■■■□□ 2.12
VARS-221ENST00000463184 TTC21AQ8NDW8 1320 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms