RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 KRT27Q7Z3Y8 459 aa11.79□□□□□ -0.52
SMC3-202ENST00000462899 WAPLQ7Z5K2 1190 aa11.79□□□□□ -0.52
SMC3-202ENST00000462899 NUP188Q5SRE5 1749 aa11.79□□□□□ -0.52
SMC3-202ENST00000462899 ADGRF5Q8IZF2 1346 aa11.79□□□□□ -0.52
SMC3-202ENST00000462899 PSDA5PKW4 1024 aaPredicted RBP11.78□□□□□ -0.52
SMC3-202ENST00000462899 ITGAEP38570 1179 aa11.78□□□□□ -0.52
SMC3-202ENST00000462899 YTHDC2Q9H6S0 1430 aaKnown RBP11.77□□□□□ -0.52
SMC3-202ENST00000462899 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
SMC3-202ENST00000462899 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
SMC3-202ENST00000462899 BAG6P46379 1132 aa11.76□□□□□ -0.53
SMC3-202ENST00000462899 KRT28Q7Z3Y7 464 aa11.76□□□□□ -0.53
SMC3-202ENST00000462899 ARHGEF10O15013 1369 aa11.76□□□□□ -0.53
SMC3-202ENST00000462899 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
SMC3-202ENST00000462899 SSUH2Q9Y2M2 353 aa11.75□□□□□ -0.53
SMC3-202ENST00000462899 ANKRD30BQ9BXX2 1392 aa11.75□□□□□ -0.53
SMC3-202ENST00000462899 FAM83GA6ND36 823 aa11.74□□□□□ -0.53
SMC3-202ENST00000462899 SIRT1Q96EB6 747 aa11.74□□□□□ -0.53
SMC3-202ENST00000462899 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
SMC3-202ENST00000462899 PHRF1Q9P1Y6 1649 aaKnown RBP11.74□□□□□ -0.53
SMC3-202ENST00000462899 ANKARQ7Z5J8 1434 aa11.73□□□□□ -0.53
SMC3-202ENST00000462899 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
SMC3-202ENST00000462899 EN1Q05925 392 aaPredicted RBP11.72□□□□□ -0.53
SMC3-202ENST00000462899 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
SMC3-202ENST00000462899 STK26Q9P289 416 aa11.72□□□□□ -0.53
SMC3-202ENST00000462899 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
SMC3-202ENST00000462899 TMEM132EQ6IEE7 984 aa11.71□□□□□ -0.53
SMC3-202ENST00000462899 RGPD3A6NKT7 1758 aaPredicted RBP11.7□□□□□ -0.54
SMC3-202ENST00000462899 RGPD4Q7Z3J3 1758 aa11.7□□□□□ -0.54
SMC3-202ENST00000462899 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
SMC3-202ENST00000462899 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
SMC3-202ENST00000462899 PSME1Q06323 249 aa11.7□□□□□ -0.54
SMC3-202ENST00000462899 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
SMC3-202ENST00000462899 ADGRB1O14514 1584 aa11.7□□□□□ -0.54
SMC3-202ENST00000462899 ITSN1Q15811 1721 aa11.69□□□□□ -0.54
SMC3-202ENST00000462899 CAMKK2Q96RR4 588 aa11.69□□□□□ -0.54
SMC3-202ENST00000462899 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
SMC3-202ENST00000462899 PARD3Q8TEW0 1356 aa11.68□□□□□ -0.54
SMC3-202ENST00000462899 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
SMC3-202ENST00000462899 FAM182BQ5T319 152 aa11.68□□□□□ -0.54
SMC3-202ENST00000462899 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
SMC3-202ENST00000462899 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
SMC3-202ENST00000462899 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
SMC3-202ENST00000462899 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
SMC3-202ENST00000462899 CASZ1Q86V15 1759 aa11.67□□□□□ -0.54
SMC3-202ENST00000462899 PARP4Q9UKK3 1724 aaKnown RBP11.67□□□□□ -0.54
SMC3-202ENST00000462899 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
SMC3-202ENST00000462899 C14orf93Q9H972 538 aaKnown RBP11.67□□□□□ -0.54
SMC3-202ENST00000462899 LMO7Q8WWI1 1683 aa11.67□□□□□ -0.54
SMC3-202ENST00000462899 PEAK1Q9H792 1746 aa11.66□□□□□ -0.54
SMC3-202ENST00000462899 TOPAZ1Q8N9V7 1692 aa11.66□□□□□ -0.54
SMC3-202ENST00000462899 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
SMC3-202ENST00000462899 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
SMC3-202ENST00000462899 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
SMC3-202ENST00000462899 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
SMC3-202ENST00000462899 PRR36Q9H6K5 1346 aa11.64□□□□□ -0.55
SMC3-202ENST00000462899 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
SMC3-202ENST00000462899 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
SMC3-202ENST00000462899 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 A0A0G2JS52 829 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 MYT1Q01538 1121 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 PMFBP1Q8TBY8 1022 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 PRAM1Q96QH2 718 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
SMC3-202ENST00000462899 ATP7BP35670 1465 aa11.63□□□□□ -0.55
SMC3-202ENST00000462899 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
SMC3-202ENST00000462899 YY1P25490 414 aa11.62□□□□□ -0.55
SMC3-202ENST00000462899 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
SMC3-202ENST00000462899 PPARGC1BQ86YN6 1023 aaKnown RBP11.62□□□□□ -0.55
SMC3-202ENST00000462899 TRIM37O94972 964 aa11.61□□□□□ -0.55
SMC3-202ENST00000462899 CFAP70Q5T0N1 1121 aa11.61□□□□□ -0.55
SMC3-202ENST00000462899 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
SMC3-202ENST00000462899 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
SMC3-202ENST00000462899 CHD4Q14839 1912 aa11.6□□□□□ -0.55
SMC3-202ENST00000462899 GPRASP1Q5JY77 1395 aa11.6□□□□□ -0.55
SMC3-202ENST00000462899 KIAA0232Q92628 1395 aa11.6□□□□□ -0.55
SMC3-202ENST00000462899 LRRC37A3O60309 1634 aa11.6□□□□□ -0.55
SMC3-202ENST00000462899 SSH2Q76I76 1423 aa11.6□□□□□ -0.55
SMC3-202ENST00000462899 GOLGB1Q14789 3259 aaKnown RBP11.59□□□□□ -0.55
SMC3-202ENST00000462899 MYOM1P52179 1685 aa11.59□□□□□ -0.55
SMC3-202ENST00000462899 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
SMC3-202ENST00000462899 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMC3-202ENST00000462899 BARGINQ6ZT62 677 aa11.58□□□□□ -0.56
SMC3-202ENST00000462899 PRDM11Q9NQV5 511 aa11.58□□□□□ -0.56
SMC3-202ENST00000462899 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
SMC3-202ENST00000462899 APBA3O96018 575 aa11.57□□□□□ -0.56
SMC3-202ENST00000462899 MPHOSPH9Q99550 1183 aa11.57□□□□□ -0.56
SMC3-202ENST00000462899 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
SMC3-202ENST00000462899 AKAP12Q02952 1782 aa11.56□□□□□ -0.56
SMC3-202ENST00000462899 POLR3AO14802 1390 aaPredicted RBP11.55□□□□□ -0.56
SMC3-202ENST00000462899 CPDO75976 1380 aa11.55□□□□□ -0.56
SMC3-202ENST00000462899 COL18A1P39060 1754 aa11.55□□□□□ -0.56
SMC3-202ENST00000462899 WASLO00401 505 aaPredicted RBP11.55□□□□□ -0.56
SMC3-202ENST00000462899 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
SMC3-202ENST00000462899 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
SMC3-202ENST00000462899 KCNQ2O43526 872 aa11.54□□□□□ -0.56
SMC3-202ENST00000462899 CHRNA2Q15822 529 aa11.54□□□□□ -0.56
SMC3-202ENST00000462899 PROM2Q8N271 834 aa11.54□□□□□ -0.56
SMC3-202ENST00000462899 SPON1Q9HCB6 807 aa11.54□□□□□ -0.56
SMC3-202ENST00000462899 COL5A2P05997 1499 aaPredicted RBP11.54□□□□□ -0.56
SMC3-202ENST00000462899 POGKQ9P215 609 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms