RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 FOSBP53539 338 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 IGBP1P78318 339 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 IRX6P78412 446 aaPredicted RBP8.59□□□□□ -1.03
SGCE-209ENST00000462731 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 METTL3Q86U44 580 aaKnown RBP8.59□□□□□ -1.03
SGCE-209ENST00000462731 PIK3R5Q8WYR1 880 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 ARMC5Q96C12 935 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 GPATCH3Q96I76 525 aa8.59□□□□□ -1.03
SGCE-209ENST00000462731 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
SGCE-209ENST00000462731 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
SGCE-209ENST00000462731 hCG_2014768A0A024R1R8 64 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 SCAMP3O14828 347 aaKnown RBP8.58□□□□□ -1.04
SGCE-209ENST00000462731 ATP9BO43861 1147 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 LILRB3O75022 631 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 OATP04181 439 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 SERPINB4P48594 390 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 SDE2Q6IQ49 451 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 PRR7Q8TB68 274 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
SGCE-209ENST00000462731 NPDC1Q9NQX5 325 aaPredicted RBP8.58□□□□□ -1.04
SGCE-209ENST00000462731 GJA5P36382 358 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 SETQ01105 290 aaPredicted RBP8.57□□□□□ -1.04
SGCE-209ENST00000462731 PTPROQ16827 1216 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
SGCE-209ENST00000462731 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
SGCE-209ENST00000462731 PLPP6Q8IY26 295 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 MORC4Q8TE76 937 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 SPIRE2Q8WWL2 714 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 KCNB2Q92953 911 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 BRINP2Q9C0B6 783 aa8.57□□□□□ -1.04
SGCE-209ENST00000462731 NOVA2Q9UNW9 492 aaKnown RBP8.57□□□□□ -1.04
SGCE-209ENST00000462731 HDLBPQ00341 1268 aaKnown RBP8.56□□□□□ -1.04
SGCE-209ENST00000462731 COL19A1Q14993 1142 aa8.56□□□□□ -1.04
SGCE-209ENST00000462731 HSP90AB4PQ58FF6 505 aa8.56□□□□□ -1.04
SGCE-209ENST00000462731 TBC1D9Q6ZT07 1266 aa8.56□□□□□ -1.04
SGCE-209ENST00000462731 KLHL42Q9P2K6 505 aa8.56□□□□□ -1.04
SGCE-209ENST00000462731 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
SGCE-209ENST00000462731 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
SGCE-209ENST00000462731 PSEN2P49810 448 aa8.55□□□□□ -1.04
SGCE-209ENST00000462731 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
SGCE-209ENST00000462731 PCDHGA4Q9Y5G9 962 aa8.55□□□□□ -1.04
SGCE-209ENST00000462731 LCE2BO14633 110 aa8.54□□□□□ -1.04
SGCE-209ENST00000462731 TAGLNQ01995 201 aaKnown RBP8.54□□□□□ -1.04
SGCE-209ENST00000462731 QPCTQ16769 361 aa8.54□□□□□ -1.04
SGCE-209ENST00000462731 CLP1Q92989 425 aaKnown RBP8.54□□□□□ -1.04
SGCE-209ENST00000462731 SPACA7Q96KW9 195 aa8.54□□□□□ -1.04
SGCE-209ENST00000462731 NLRP2Q9NX02 1062 aa8.54□□□□□ -1.04
SGCE-209ENST00000462731 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
SGCE-209ENST00000462731 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
SGCE-209ENST00000462731 PSME1Q06323 249 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 RAD51AP2Q09MP3 1159 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 SEMA3FQ13275 785 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 CCDC144BQ3MJ40 725 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 TINF2Q9BSI4 451 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 CDHR5Q9HBB8 845 aa8.53□□□□□ -1.04
SGCE-209ENST00000462731 MAFGO15525 162 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 ATP2B1P20020 1258 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 MRPL58Q14197 206 aaKnown RBP8.52□□□□□ -1.05
SGCE-209ENST00000462731 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
SGCE-209ENST00000462731 PXYLP1Q8TE99 480 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 NLRP7Q8WX94 980 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 TRIM34Q9BYJ4 488 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 PRKAG2Q9UGJ0 569 aa8.52□□□□□ -1.05
SGCE-209ENST00000462731 HMGB1P1B2RPK0 211 aaPredicted RBP8.51□□□□□ -1.05
SGCE-209ENST00000462731 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
SGCE-209ENST00000462731 SMC5Q8IY18 1101 aa8.51□□□□□ -1.05
SGCE-209ENST00000462731 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
SGCE-209ENST00000462731 ASB16Q96NS5 453 aa8.51□□□□□ -1.05
SGCE-209ENST00000462731 SLAIN2Q9P270 581 aa8.51□□□□□ -1.05
SGCE-209ENST00000462731 FAM196BA6NMK8 535 aa8.5□□□□□ -1.05
SGCE-209ENST00000462731 SLC34A2O95436 690 aa8.5□□□□□ -1.05
SGCE-209ENST00000462731 PARNO95453 639 aaKnown RBP8.5□□□□□ -1.05
SGCE-209ENST00000462731 ANAPC15P60006 121 aa8.5□□□□□ -1.05
SGCE-209ENST00000462731 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
SGCE-209ENST00000462731 DHX38Q92620 1227 aaKnown RBP8.5□□□□□ -1.05
SGCE-209ENST00000462731 EGFL7Q9UHF1 273 aa8.5□□□□□ -1.05
SGCE-209ENST00000462731 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
SGCE-209ENST00000462731 CCDC194A0A1B0GVG4 234 aa8.49□□□□□ -1.05
SGCE-209ENST00000462731 EIF3JO75822 258 aaKnown RBP8.49□□□□□ -1.05
SGCE-209ENST00000462731 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
SGCE-209ENST00000462731 LAPTM4AQ15012 233 aa8.49□□□□□ -1.05
SGCE-209ENST00000462731 NLGN1Q8N2Q7 840 aa8.49□□□□□ -1.05
SGCE-209ENST00000462731 HMX1Q9NP08 348 aaPredicted RBP8.49□□□□□ -1.05
SGCE-209ENST00000462731 NUTM2BA6NNL0 878 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 NUTM2EB1AL46 878 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 MAP4K4O95819 1239 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 ATP2B4P23634 1241 aa8.48□□□□□ -1.05
SGCE-209ENST00000462731 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 SPTY2D1Q68D10 685 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 NUTM2AQ8IVF1 878 aaPredicted RBP8.48□□□□□ -1.05
SGCE-209ENST00000462731 C1orf216Q8TAB5 229 aa8.48□□□□□ -1.05
SGCE-209ENST00000462731 UBA5Q9GZZ9 404 aa8.48□□□□□ -1.05
SGCE-209ENST00000462731 MOXD2PA6NHM9 499 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 KIF3CO14782 793 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 FAM69CQ0P6D2 419 aa8.47□□□□□ -1.05
SGCE-209ENST00000462731 ZSCAN29Q8IWY8 852 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms